Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00280
Gene name
Locationscaffold_01:1357011..1359477
Strand+
Gene length (bp)2466
Transcript length (bp)945
Coding sequence length (bp)945
Protein length (aa) 315

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 30 0.45

Transmembrane Domains

Domain # Start End Length
1 36 54 18
2 142 164 22
3 220 237 17
4 274 296 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00280
MPAGPKPKQGMMKMTTLNVATQIMMLVAAHEPDPDITGIGIIIGFPATAYINLGHEVVAIYIMAFDPAKDSFPEM
DSVCRPIARFLGLAPCWAGYTVDFERVFNETTLSMCDAQILAGGGTLISSFLCLHSNLSAYHWRIMILLAWFFTI
SHITGFASVQAHLCSSSWKRNSSSFNLCCYLRLRFPFCKIPDLASSEELNSFSQSSARSPDKFIVAMRHYLILRP
ALAIIVLFYIIYDICGSMFTEVCWLAVSLEWGTARSFTKLIWRIWGTPWLGVQIVTSSITPLVLGVLAVWSFPNS
IIDQSPDFNFHGFW*
Coding >Ophcf2|00280
ATGCCCGCGGGTCCGAAACCCAAGCAGGGGATGATGAAGATGACGACGCTGAATGTGGCAACCCAGATAATGATG
CTCGTCGCGGCACATGAGCCCGATCCCGACATCACGGGCATTGGGATCATTATCGGATTCCCTGCAACTGCCTAC
ATTAATCTAGGCCACGAGGTGGTTGCCATTTACATCATGGCCTTCGACCCGGCCAAGGACTCGTTTCCGGAGATG
GATTCCGTCTGCAGGCCCATTGCTCGCTTCCTAGGCCTCGCGCCTTGTTGGGCTGGATATACCGTGGATTTCGAG
CGCGTCTTCAACGAGACAACTCTCTCCATGTGCGATGCTCAGATCCTCGCCGGTGGCGGAACCCTCATCAGTAGC
TTCCTTTGCCTGCACAGCAACCTATCCGCTTATCACTGGCGGATCATGATACTCCTAGCTTGGTTTTTCACTATA
TCACACATTACTGGCTTCGCATCTGTTCAAGCCCATCTCTGCAGCTCCTCGTGGAAGAGAAACTCGAGTTCTTTC
AACCTCTGCTGCTATCTGCGATTGCGATTCCCATTCTGCAAGATTCCTGACCTGGCTAGCTCCGAAGAACTCAAC
TCCTTCAGTCAATCCTCAGCTAGGTCTCCGGACAAGTTTATAGTAGCTATGAGGCACTATTTGATACTGAGGCCG
GCACTCGCCATCATTGTTCTCTTTTACATCATCTATGATATCTGCGGCTCTATGTTCACCGAGGTCTGCTGGCTA
GCAGTTTCCTTGGAATGGGGGACCGCAAGATCTTTTACCAAACTAATTTGGCGAATCTGGGGAACACCATGGCTG
GGCGTTCAAATCGTTACGTCGAGCATCACGCCTCTCGTCCTCGGAGTATTGGCCGTTTGGTCTTTCCCCAACTCG
ATCATTGATCAGAGTCCAGACTTCAACTTCCATGGCTTCTGGTGA
Transcript >Ophcf2|00280
ATGCCCGCGGGTCCGAAACCCAAGCAGGGGATGATGAAGATGACGACGCTGAATGTGGCAACCCAGATAATGATG
CTCGTCGCGGCACATGAGCCCGATCCCGACATCACGGGCATTGGGATCATTATCGGATTCCCTGCAACTGCCTAC
ATTAATCTAGGCCACGAGGTGGTTGCCATTTACATCATGGCCTTCGACCCGGCCAAGGACTCGTTTCCGGAGATG
GATTCCGTCTGCAGGCCCATTGCTCGCTTCCTAGGCCTCGCGCCTTGTTGGGCTGGATATACCGTGGATTTCGAG
CGCGTCTTCAACGAGACAACTCTCTCCATGTGCGATGCTCAGATCCTCGCCGGTGGCGGAACCCTCATCAGTAGC
TTCCTTTGCCTGCACAGCAACCTATCCGCTTATCACTGGCGGATCATGATACTCCTAGCTTGGTTTTTCACTATA
TCACACATTACTGGCTTCGCATCTGTTCAAGCCCATCTCTGCAGCTCCTCGTGGAAGAGAAACTCGAGTTCTTTC
AACCTCTGCTGCTATCTGCGATTGCGATTCCCATTCTGCAAGATTCCTGACCTGGCTAGCTCCGAAGAACTCAAC
TCCTTCAGTCAATCCTCAGCTAGGTCTCCGGACAAGTTTATAGTAGCTATGAGGCACTATTTGATACTGAGGCCG
GCACTCGCCATCATTGTTCTCTTTTACATCATCTATGATATCTGCGGCTCTATGTTCACCGAGGTCTGCTGGCTA
GCAGTTTCCTTGGAATGGGGGACCGCAAGATCTTTTACCAAACTAATTTGGCGAATCTGGGGAACACCATGGCTG
GGCGTTCAAATCGTTACGTCGAGCATCACGCCTCTCGTCCTCGGAGTATTGGCCGTTTGGTCTTTCCCCAACTCG
ATCATTGATCAGAGTCCAGACTTCAACTTCCATGGCTTCTGGTGA
Gene >Ophcf2|00280
ATGCCCGCGGGTCCGAAACCCAAGCAGGGGATGATGAAGATGACGACGCTGAATGTGGCAACCCAGATAATGATG
CTCGTCGCGGCGTCTGTCGCTAGTCAGCAAGTTTGAGTGGAAGACTAGCAGCAGAGGAAGACTGACGAGATCGAG
AGAGCCAATCGACCAGAGGGTCAAATGGCGAGCTCTTGAGCCACTCCCAAGCCGAGTTGAAGGCGTCTCCCAGCC
ATCCCATCCCACGATGCACTCCGTCCCAGGGGATCGATGGCACACGGTCAGAAAGAATGGGCGGCAGAAACATTG
GGAGATTCGAGTGTGCGAAGCGAGTAATTTGACGCAGTTGAAGGTGTGGACGAATGAGTCCGAGGGTAAGCTCCG
TTCGTCAGAAGGTGGGAAACGAGCTCTGACGGCTGTCTGCAGCAAACAGCAAACGCAAACGCTGACTGTTAGATT
AGATAGATAACTAACTACCTGGATACTTGTCTTACGACCAACAACGCTGCACCGCGTCAGAATATGATCAGTGCT
GAATGCCGCTTGCCGAAGCTTAAAAGAGCGATGGGGTTGTTGGCGACTGCTGGCTGATGACAGAGAGCATCCTAG
CTGTTGACGAAGCCAGTCTTGAAGCATCTTCAAATGACTTTTCTTCTGCAGAACAGAGCATTAAGGCCTACGTCA
ACATCCATCGGAAGATGACGACGAGGTCGAGGAAGATAGCTGACATCTCCCGTTCTTATTGGCACGTGGAGGTTC
GGCGGCGAACAAGCGTCTCAACAGTCTCAGCAGGGGGCCTTTGTGGGAATCGAGGGTTATGTACGAAGTAGGGGC
ACCCCTGTCACTTAGGCAGGGAGGTTCATGGGTCAACCTTCGTATGTTTGTACGGATATGCTGACACGAAGTAGG
GTTCAACAACTCATGGCCGTGAGGAGCGCTCTCGCAACTTAAAAATCCATAAATAGATGGAGGCGCACCCGCAGC
TAGCCAAGCTCTTTATGCTGCAGAATCACCAAGATGTCGGCGGGACAGTCGCATCAAGGATGTCTGGACCTCAAC
AAGACATGAGCCCGATCCCGACATCACGGGCATTGGGGTAAGTGGTCACACTTCCAAAGAGTGCTCCCTGCTCAC
CAGCAAACCTACAGATCATTATCGGATTCCCTGCAACTGCCTACATTAATCTAGGCCACGAGGTGGTTGCCATTT
ACATCATGGCCTTCGACCCGGCCAAGGACTCGTTTCCGGAGATGGATTCGTCGCAGGGAGAACCGATCAAAGGAA
GCCATCGAGGCCGAACCCGGTCGAAGAAAAGTTTCTCGCCATGTCTCGCAGCGTCTGCAGGCCCATTGCTCGCTT
CCTAGGCCTCGCGCCTTGTTGGGCTGGATATACCGTGGATTTCGAGCGCGTCTTCAACGAGGTGACCAACCAATT
CTATGGGATCCTTCACTCTAGCGTTGCCTATCTACAGAGCGCTTGCTAACACTTGGCAACGGCCGTCCTCGTCTA
GACAACTCTCTCCATGTGCGATGCTCAGATCCTCGCCGGTGGCGGAACCCTCATCAGTAGCTTCCTTTGCCTGCA
CAGCAACCTATCCGCTTATCACTGGCGGATCATGATACTCCTAGCTTGGTTTTTCACTATATCACACATTACTGG
CTTCGCATCTGTTCAAGCCCATCTCTGCAGCTCCTCGTGGAAGAGAAACTCGAGTTCTTTCAACCTCTGCTGCTA
TCTGCGATTGCGATTCCCAGTACCTCCATCACATGAAAGAGCTGTATACAAGGACGGCCGAGATGAGCTGGACAG
AGCTCAGGATGTTCGACCAGAAGAAAAGCCATACTCAGGCATACGTATCTATCGCCCTTTTGGTCTTTGCAGCCT
TGGTTCGCCTACTAAAATCGTACAATCTCTTTTCTCAAAACTTTAAATGGGGACTCAAAACCCGTTTTCATGCCA
GTTCTGCAAGATTCCTGACCTGGCTAGCTCCGAAGAACTCAACTCCTTCAGTCAATCCTCAGCTAGGTCTCCGGA
CAAGTTTATAGTAGCTATGAGGCACTATTTGATACTGAGGCCGGCACTCGCCATCATTGTTCTCTTTTACATCAT
CTATGATATCTGCGGCTCTATGTTCACCGAGGTTCGTCATTCCGTTTTCAGCTCATCTAAACCATCTTCTATGTA
ACTATGTTGTTGACTGACCATCGGTCCATCAGGTCTGCTGGCTAGCAGTTTCCTTGGAATGGGGGACCGCAAGAT
CTTTTACCAAACTAATTTGGCGAATCTGGGGAAGTCGGATTTCGGGAGACCACGATTCAAAGCCCTCGAGACTAC
TACCTGACAGCACCATGGCTGGGCGTTCAAATCGTTACGTCGAGCATCACGCCTCTCGTCCTCGGAGTATTGGCC
GTTTGGTCTTTCCCCAACTCGATCATTGATCAGAGTCCAGACTTCAACTTCCATGGCTTCTGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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