Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00278
Gene name
Locationscaffold_01:1352843..1354222
Strand-
Gene length (bp)1379
Transcript length (bp)1308
Coding sequence length (bp)1308
Protein length (aa) 436

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00134 Cyclin_N Cyclin, N-terminal domain 2.0E-10 87 217

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 40 0.45

Transmembrane Domains

Domain # Start End Length
1 108 130 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00278
MASIDRYRPPREGYQPPSLPGATRNDQASRSPPRRREVPPAAPTPPQHSARTSPPRSGTQPGQQSPSPSARRGYQ
WSFTPEEVSSSPSIIHGMPPAEERLRRAKGVNFIYQAGVVLDLPQITLWVAGVFFHRFFMRKSMVEEMGGVHHYN
IAATALFLANKVEENCRKTKDIIIAVVKVAQKNAKLVIDEQSKEYWRWRDSILMYEESMLEHLTFDLMIDNPYRH
LFELLGQLDIVHNKHLRQAAWAFCNDACLTALPLLIEARDVAISAIFFASVHTGQQVDDIHGEPWWKYLNGDEER
CTRAIEVMRQFYTENPLRKQNPSLPSPPYDLENTRRRADALLSQPEALSSAGGTPMIDRASRSPAPPKTNGTDRG
SETKEQEAKTAPTARGAEGADAVPSSTPKRREATDADTGSSQERPEKRTRLSEDEGEVEE*
Coding >Ophcf2|00278
ATGGCGAGCATCGACCGCTATCGACCGCCACGCGAAGGCTACCAGCCTCCGAGCCTCCCGGGGGCGACCCGGAAC
GATCAGGCGTCTCGATCCCCTCCTCGTCGGCGCGAGGTGCCTCCCGCAGCGCCGACGCCGCCCCAGCACAGCGCG
CGGACTTCTCCACCTCGATCCGGAACCCAGCCGGGCCAGCAGTCGCCTTCGCCGTCGGCCAGGCGGGGCTACCAG
TGGTCTTTCACGCCCGAGGAGGTGTCCAGCTCGCCGAGCATCATTCATGGCATGCCCCCGGCCGAGGAGAGGTTG
CGCAGGGCCAAGGGCGTCAACTTCATCTACCAGGCCGGCGTCGTACTCGACCTGCCGCAAATCACTCTCTGGGTA
GCGGGCGTCTTCTTCCATAGGTTTTTCATGCGTAAGAGCATGGTTGAGGAGATGGGCGGCGTTCATCATTATAAC
ATCGCCGCCACCGCGCTCTTTCTCGCAAACAAGGTCGAGGAGAACTGCCGAAAAACCAAAGACATCATTATAGCG
GTGGTCAAGGTGGCTCAGAAAAACGCCAAGCTGGTCATCGACGAGCAGAGCAAGGAATACTGGCGTTGGAGAGAC
AGTATCCTCATGTACGAAGAGAGTATGCTTGAGCACCTCACCTTTGACTTGATGATTGACAATCCCTACCGGCAT
CTCTTTGAGCTCCTCGGACAGCTCGACATTGTTCACAACAAGCACTTGAGACAGGCAGCATGGGCTTTCTGTAAC
GACGCATGCCTGACTGCGCTGCCGCTCCTCATCGAGGCGAGAGACGTCGCCATCAGCGCCATCTTCTTTGCCAGC
GTCCACACCGGCCAGCAGGTCGACGACATACACGGCGAGCCGTGGTGGAAGTACTTGAACGGCGACGAGGAGCGA
TGCACTCGGGCCATCGAGGTGATGCGCCAGTTCTACACAGAGAACCCGCTTAGAAAGCAGAATCCGTCGCTGCCA
TCACCCCCCTACGACCTTGAGAACACGAGACGGAGGGCAGACGCGCTCTTGAGCCAGCCCGAGGCGCTTTCATCG
GCTGGCGGCACCCCCATGATCGATCGAGCCAGCCGCAGCCCGGCGCCGCCCAAGACGAACGGCACCGACAGGGGC
TCCGAGACCAAAGAGCAGGAGGCGAAGACGGCGCCGACGGCCCGTGGAGCAGAGGGTGCCGACGCCGTCCCGAGT
TCAACGCCCAAGAGGAGAGAGGCCACGGACGCAGACACCGGCTCAAGCCAGGAGAGGCCCGAGAAGCGGACCAGA
CTGTCGGAGGATGAGGGCGAAGTGGAGGAGTGA
Transcript >Ophcf2|00278
ATGGCGAGCATCGACCGCTATCGACCGCCACGCGAAGGCTACCAGCCTCCGAGCCTCCCGGGGGCGACCCGGAAC
GATCAGGCGTCTCGATCCCCTCCTCGTCGGCGCGAGGTGCCTCCCGCAGCGCCGACGCCGCCCCAGCACAGCGCG
CGGACTTCTCCACCTCGATCCGGAACCCAGCCGGGCCAGCAGTCGCCTTCGCCGTCGGCCAGGCGGGGCTACCAG
TGGTCTTTCACGCCCGAGGAGGTGTCCAGCTCGCCGAGCATCATTCATGGCATGCCCCCGGCCGAGGAGAGGTTG
CGCAGGGCCAAGGGCGTCAACTTCATCTACCAGGCCGGCGTCGTACTCGACCTGCCGCAAATCACTCTCTGGGTA
GCGGGCGTCTTCTTCCATAGGTTTTTCATGCGTAAGAGCATGGTTGAGGAGATGGGCGGCGTTCATCATTATAAC
ATCGCCGCCACCGCGCTCTTTCTCGCAAACAAGGTCGAGGAGAACTGCCGAAAAACCAAAGACATCATTATAGCG
GTGGTCAAGGTGGCTCAGAAAAACGCCAAGCTGGTCATCGACGAGCAGAGCAAGGAATACTGGCGTTGGAGAGAC
AGTATCCTCATGTACGAAGAGAGTATGCTTGAGCACCTCACCTTTGACTTGATGATTGACAATCCCTACCGGCAT
CTCTTTGAGCTCCTCGGACAGCTCGACATTGTTCACAACAAGCACTTGAGACAGGCAGCATGGGCTTTCTGTAAC
GACGCATGCCTGACTGCGCTGCCGCTCCTCATCGAGGCGAGAGACGTCGCCATCAGCGCCATCTTCTTTGCCAGC
GTCCACACCGGCCAGCAGGTCGACGACATACACGGCGAGCCGTGGTGGAAGTACTTGAACGGCGACGAGGAGCGA
TGCACTCGGGCCATCGAGGTGATGCGCCAGTTCTACACAGAGAACCCGCTTAGAAAGCAGAATCCGTCGCTGCCA
TCACCCCCCTACGACCTTGAGAACACGAGACGGAGGGCAGACGCGCTCTTGAGCCAGCCCGAGGCGCTTTCATCG
GCTGGCGGCACCCCCATGATCGATCGAGCCAGCCGCAGCCCGGCGCCGCCCAAGACGAACGGCACCGACAGGGGC
TCCGAGACCAAAGAGCAGGAGGCGAAGACGGCGCCGACGGCCCGTGGAGCAGAGGGTGCCGACGCCGTCCCGAGT
TCAACGCCCAAGAGGAGAGAGGCCACGGACGCAGACACCGGCTCAAGCCAGGAGAGGCCCGAGAAGCGGACCAGA
CTGTCGGAGGATGAGGGCGAAGTGGAGGAGTGA
Gene >Ophcf2|00278
ATGGCGAGCATCGACCGCTATCGACCGCCACGCGAAGGCTACCAGCCTCCGAGCCTCCCGGGGGCGACCCGGAAC
GATCAGGCGTCTCGATCCCCTCCTCGTCGGCGCGAGGTGCCTCCCGCAGCGCCGACGCCGCCCCAGCACAGCGCG
CGGACTTCTCCACCTCGATCCGGAACCCAGCCGGGCCAGCAGTCGCCTTCGCCGTCGGCCAGGCGGGGCTACCAG
TGGTCTTTCACGCCCGAGGAGGTGTCCAGCTCGCCGAGCATCATTCATGGCATGCCCCCGGCCGAGGAGAGGTTG
CGCAGGGCCAAGGGCGTCAACTTCATCTACCAGGCCGGCGTCGTACTCGACCTGCCGCAAATCACTCTCTGGGTA
GCGGGCGTCTTCTTCCATAGGTTTTTCATGCGTAAGAGCATGGTTGAGGAGATGGGCGGCGTTCATCATTATGTT
AGTTTTCTTCCCATTCTTTCTCTGGGCCGCGAATATGCTGACGAGGTTGGGCATCCGCCCTCGAACAGAACATCG
CCGCCACCGCGCTCTTTCTCGCAAACAAGGTCGAGGAGAACTGCCGAAAAACCAAAGACATCATTATAGCGGTGG
TCAAGGTGGCTCAGAAAAACGCCAAGCTGGTCATCGACGAGCAGAGCAAGGAATACTGGCGTTGGAGAGACAGTA
TCCTCATGTACGAAGAGAGTATGCTTGAGCACCTCACCTTTGACTTGATGATTGACAATCCCTACCGGCATCTCT
TTGAGCTCCTCGGACAGCTCGACATTGTTCACAACAAGCACTTGAGACAGGCAGCATGGGCTTTCTGTAACGACG
CATGCCTGACTGCGCTGCCGCTCCTCATCGAGGCGAGAGACGTCGCCATCAGCGCCATCTTCTTTGCCAGCGTCC
ACACCGGCCAGCAGGTCGACGACATACACGGCGAGCCGTGGTGGAAGTACTTGAACGGCGACGAGGAGCGATGCA
CTCGGGCCATCGAGGTGATGCGCCAGTTCTACACAGAGAACCCGCTTAGAAAGCAGAATCCGTCGCTGCCATCAC
CCCCCTACGACCTTGAGAACACGAGACGGAGGGCAGACGCGCTCTTGAGCCAGCCCGAGGCGCTTTCATCGGCTG
GCGGCACCCCCATGATCGATCGAGCCAGCCGCAGCCCGGCGCCGCCCAAGACGAACGGCACCGACAGGGGCTCCG
AGACCAAAGAGCAGGAGGCGAAGACGGCGCCGACGGCCCGTGGAGCAGAGGGTGCCGACGCCGTCCCGAGTTCAA
CGCCCAAGAGGAGAGAGGCCACGGACGCAGACACCGGCTCAAGCCAGGAGAGGCCCGAGAAGCGGACCAGACTGT
CGGAGGATGAGGGCGAAGTGGAGGAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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