Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00251
Gene name
Locationscaffold_01:1292144..1293272
Strand+
Gene length (bp)1128
Transcript length (bp)1077
Coding sequence length (bp)1077
Protein length (aa) 359

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 58 0.45

Transmembrane Domains

Domain # Start End Length
1 221 243 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00251
MGDQAVSPLEQPDRTSPSASSLSDTPSVHFNVSDVGAEDRVFETGLHCISYNYSVEAVRPQSIRWCFMDDESTGN
FSTIASANLNPMTGQVIFESDPAFSLLPAYISRDEPGRGQVMLHPSAIDPESRNKDVGEQPSNRLSPLGKPMVLR
VYWEEGAKYSQSGVFTVVRNPQDVAIQDVARWIRGQPGGERGLDQPVNQEVRTTNINPAGQDNHISTAAVAGIVV
GTILALLIGASILTWMLLRRRRRSERERKTVYALQNKRSKSSVDGKDLGPPPSTHHAGDVAREATPGQTGGYDNG
GLSPVASDVVDFEDRSQHIPSSGVAHHLVEEGMTEAEIRRLEEEERQLDAEIALAGHR*
Coding >Ophcf2|00251
ATGGGTGATCAGGCTGTGTCCCCCCTTGAACAGCCAGACCGGACGAGTCCGTCCGCGAGCTCTTTGTCCGATACG
CCGTCCGTTCACTTCAACGTCAGTGACGTGGGCGCAGAGGACCGAGTCTTCGAAACAGGGCTGCATTGCATATCC
TACAACTACAGCGTCGAAGCCGTCCGTCCGCAAAGCATCAGATGGTGTTTTATGGACGATGAGAGCACTGGAAAC
TTTTCGACTATTGCATCTGCGAATCTGAACCCCATGACTGGACAGGTCATCTTCGAATCAGACCCGGCCTTCTCG
CTACTCCCTGCTTATATATCCCGAGACGAGCCCGGTCGAGGTCAAGTCATGTTGCACCCGTCAGCCATTGACCCA
GAATCCCGCAACAAAGACGTCGGCGAGCAGCCTTCAAACCGCCTGTCTCCTCTAGGCAAACCGATGGTGTTGCGC
GTCTACTGGGAAGAGGGTGCCAAATACTCACAGTCCGGTGTCTTCACCGTCGTCCGCAACCCACAAGATGTCGCC
ATCCAAGATGTCGCGAGATGGATAAGAGGCCAGCCGGGAGGGGAAAGGGGTCTCGATCAGCCCGTCAACCAGGAG
GTCAGAACCACCAACATCAACCCAGCTGGTCAAGACAATCATATCTCGACGGCTGCCGTAGCTGGAATCGTCGTC
GGCACCATTCTCGCCCTCCTCATCGGTGCCTCTATCCTGACATGGATGCTGTTGCGTCGCCGCCGCCGGAGCGAA
CGAGAGCGAAAGACGGTTTACGCCTTGCAAAACAAGAGGTCCAAGAGCTCGGTGGATGGCAAAGACCTCGGACCT
CCGCCCTCTACTCACCATGCGGGAGACGTTGCACGAGAAGCGACGCCAGGCCAGACAGGCGGCTACGACAACGGC
GGTCTCTCACCCGTCGCTTCCGACGTGGTCGACTTTGAAGACAGGAGCCAGCATATACCGTCCAGCGGTGTTGCT
CATCACCTGGTCGAGGAGGGCATGACCGAGGCTGAGATCCGCCGTCTTGAGGAAGAGGAGCGACAGCTGGATGCC
GAGATTGCGCTCGCCGGCCACCGGTAG
Transcript >Ophcf2|00251
ATGGGTGATCAGGCTGTGTCCCCCCTTGAACAGCCAGACCGGACGAGTCCGTCCGCGAGCTCTTTGTCCGATACG
CCGTCCGTTCACTTCAACGTCAGTGACGTGGGCGCAGAGGACCGAGTCTTCGAAACAGGGCTGCATTGCATATCC
TACAACTACAGCGTCGAAGCCGTCCGTCCGCAAAGCATCAGATGGTGTTTTATGGACGATGAGAGCACTGGAAAC
TTTTCGACTATTGCATCTGCGAATCTGAACCCCATGACTGGACAGGTCATCTTCGAATCAGACCCGGCCTTCTCG
CTACTCCCTGCTTATATATCCCGAGACGAGCCCGGTCGAGGTCAAGTCATGTTGCACCCGTCAGCCATTGACCCA
GAATCCCGCAACAAAGACGTCGGCGAGCAGCCTTCAAACCGCCTGTCTCCTCTAGGCAAACCGATGGTGTTGCGC
GTCTACTGGGAAGAGGGTGCCAAATACTCACAGTCCGGTGTCTTCACCGTCGTCCGCAACCCACAAGATGTCGCC
ATCCAAGATGTCGCGAGATGGATAAGAGGCCAGCCGGGAGGGGAAAGGGGTCTCGATCAGCCCGTCAACCAGGAG
GTCAGAACCACCAACATCAACCCAGCTGGTCAAGACAATCATATCTCGACGGCTGCCGTAGCTGGAATCGTCGTC
GGCACCATTCTCGCCCTCCTCATCGGTGCCTCTATCCTGACATGGATGCTGTTGCGTCGCCGCCGCCGGAGCGAA
CGAGAGCGAAAGACGGTTTACGCCTTGCAAAACAAGAGGTCCAAGAGCTCGGTGGATGGCAAAGACCTCGGACCT
CCGCCCTCTACTCACCATGCGGGAGACGTTGCACGAGAAGCGACGCCAGGCCAGACAGGCGGCTACGACAACGGC
GGTCTCTCACCCGTCGCTTCCGACGTGGTCGACTTTGAAGACAGGAGCCAGCATATACCGTCCAGCGGTGTTGCT
CATCACCTGGTCGAGGAGGGCATGACCGAGGCTGAGATCCGCCGTCTTGAGGAAGAGGAGCGACAGCTGGATGCC
GAGATTGCGCTCGCCGGCCACCGGTAG
Gene >Ophcf2|00251
ATGGGTGATCAGGCTGTGTCCCCCCTTGAACAGCCAGACCGGACGAGTCCGTCCGCGAGCTCTTTGTCCGATACG
CCGTCCGTTCACTTCAACGTCAGTGACGTGGGCGCAGAGGACCGAGTCTTCGAAACAGGGCTGCATTGCATATCC
TACAACTACAGCGTCGAAGCCGTCCGTCCGCAAAGCATCAGATGGTGTTTTATGGACGATGAGAGCACTGGAAAC
TTTTCGACTATTGCATCTGCGAATCTGAACCCCATGACTGGACAGGTCATCTTCGAATCAGACCCGGCCTTCTCG
CTACTCCCTGCTTATAGTAAGTCTGACGTGGCCGGCTGACGATCCTGGGCTGACATCTCCCATCAAGTATCCCGA
GACGAGCCCGGTCGAGGTCAAGTCATGTTGCACCCGTCAGCCATTGACCCAGAATCCCGCAACAAAGACGTCGGC
GAGCAGCCTTCAAACCGCCTGTCTCCTCTAGGCAAACCGATGGTGTTGCGCGTCTACTGGGAAGAGGGTGCCAAA
TACTCACAGTCCGGTGTCTTCACCGTCGTCCGCAACCCACAAGATGTCGCCATCCAAGATGTCGCGAGATGGATA
AGAGGCCAGCCGGGAGGGGAAAGGGGTCTCGATCAGCCCGTCAACCAGGAGGTCAGAACCACCAACATCAACCCA
GCTGGTCAAGACAATCATATCTCGACGGCTGCCGTAGCTGGAATCGTCGTCGGCACCATTCTCGCCCTCCTCATC
GGTGCCTCTATCCTGACATGGATGCTGTTGCGTCGCCGCCGCCGGAGCGAACGAGAGCGAAAGACGGTTTACGCC
TTGCAAAACAAGAGGTCCAAGAGCTCGGTGGATGGCAAAGACCTCGGACCTCCGCCCTCTACTCACCATGCGGGA
GACGTTGCACGAGAAGCGACGCCAGGCCAGACAGGCGGCTACGACAACGGCGGTCTCTCACCCGTCGCTTCCGAC
GTGGTCGACTTTGAAGACAGGAGCCAGCATATACCGTCCAGCGGTGTTGCTCATCACCTGGTCGAGGAGGGCATG
ACCGAGGCTGAGATCCGCCGTCTTGAGGAAGAGGAGCGACAGCTGGATGCCGAGATTGCGCTCGCCGGCCACCGG
TAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail