Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00213
Gene name
Locationscaffold_01:1193508..1193865
Strand-
Gene length (bp)357
Transcript length (bp)225
Coding sequence length (bp)225
Protein length (aa) 75

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09813 Coa3_cc Cytochrome c oxidase assembly factor 3 1.7E-15 20 60

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 34 0.5

Transmembrane Domains

Domain # Start End Length
1 28 50 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00213
MFPHAHQTYYDRRNRIGPALARARRPYLFRNTVTGLGLMSIVIGIYVYTIKAVGQDEFADVKVPDAPRQAAGKN*
Coding >Ophcf2|00213
ATGTTCCCTCACGCACATCAAACCTACTACGATCGACGCAACAGGATCGGCCCAGCCCTCGCCCGAGCCCGACGA
CCGTATCTATTCCGCAACACTGTCACTGGCTTGGGCTTGATGTCCATCGTCATAGGCATCTATGTATACACCATC
AAGGCCGTCGGCCAGGACGAATTCGCCGATGTCAAGGTGCCCGATGCTCCTCGACAAGCAGCCGGCAAGAACTAG
Transcript >Ophcf2|00213
ATGTTCCCTCACGCACATCAAACCTACTACGATCGACGCAACAGGATCGGCCCAGCCCTCGCCCGAGCCCGACGA
CCGTATCTATTCCGCAACACTGTCACTGGCTTGGGCTTGATGTCCATCGTCATAGGCATCTATGTATACACCATC
AAGGCCGTCGGCCAGGACGAATTCGCCGATGTCAAGGTGCCCGATGCTCCTCGACAAGCAGCCGGCAAGAACTAG
Gene >Ophcf2|00213
ATGTTCCCTCAGTAAGAGAAGCTTCCTCTTTTCCCTCAGACCATCAATACTCACCGCTCGCCTCCCGCAGCGCAC
ATCAAACCTACTACGATCGACGCAACAGGATCGGCCCAGCCCTCGCCCGAGCCCGACGACCGTATCTATTCCGCA
ACACTGTCACTGGCTTGGGCTTGATGTCCATCGTCATAGGCATCTGTGAGACTCGCTGCGCTTTAGCAGACTTTG
CTTTCGCATCAATGAGCGTGGGAATGCTCATGAGCTGTCATAGATGTATACACCATCAAGGCCGTCGGCCAGGAC
GAATTCGCCGATGTCAAGGTGCCCGATGCTCCTCGACAAGCAGCCGGCAAGAACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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