Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00209
Gene name
Locationscaffold_01:1184388..1185545
Strand+
Gene length (bp)1157
Transcript length (bp)1023
Coding sequence length (bp)1023
Protein length (aa) 341

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 223 245 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00209
MPLQPEPGRARGPLLPTSTAASPSPPPRQKPSQTPSGLALPPMTTHWTKPQSCTWTYVADGHFGRASKGAIAWLD
LEPVPGASTLSCYPDGMFFEGRTGIFSPATCPDGWFTVTVQVGHVAETLHPTTTAVCCSSYYSYDGSHCKRSVPT
ALAVPISYDRVAGTHEVMVNSTTTLYSATIAVNAIRALFMEQDKHLLGLTDDEEIRHEEDEATTTSLSLGARIGI
AIGVTVIALLSLGAISFCLFRWRHSRRRRAKRMVLHELGAVRSRVRESMEPDTVFDGHDRCVLAPPPAYEASAGG
QRAASANEEIRALVAHKAAIQRRIEELERDNSEGGEVRGL*
Coding >Ophcf2|00209
ATGCCGCTGCAGCCTGAGCCTGGCAGAGCGAGGGGTCCCCTGTTGCCGACTTCGACCGCTGCGTCCCCGTCGCCT
CCGCCGAGGCAGAAGCCAAGCCAGACTCCATCGGGTCTGGCCTTGCCGCCCATGACGACGCACTGGACCAAACCT
CAAAGCTGCACATGGACATACGTCGCCGATGGACATTTTGGAAGGGCCTCCAAGGGAGCCATCGCCTGGCTGGAC
CTCGAGCCCGTGCCCGGAGCGAGCACCTTGTCGTGCTACCCAGACGGCATGTTCTTTGAAGGGCGCACCGGCATT
TTCAGCCCGGCCACTTGCCCCGACGGCTGGTTCACCGTGACGGTCCAGGTCGGTCACGTAGCCGAGACGCTTCAT
CCGACGACTACGGCCGTCTGCTGCTCCTCCTACTACTCGTATGACGGCTCTCACTGCAAAAGGTCGGTGCCCACG
GCCCTGGCTGTCCCCATCAGCTACGACCGCGTGGCCGGAACGCACGAGGTCATGGTCAACTCGACCACAACCCTG
TACAGCGCCACGATAGCCGTCAACGCCATCCGGGCCCTCTTCATGGAGCAGGACAAACACCTCTTGGGCCTGACG
GACGACGAGGAGATCAGACACGAAGAGGACGAGGCGACGACGACTTCGCTGTCCTTGGGAGCGCGAATCGGCATC
GCCATTGGCGTCACCGTGATCGCGCTATTGTCTCTGGGAGCCATCTCGTTCTGCCTCTTCCGATGGCGCCACTCG
CGGAGGAGGAGAGCCAAGAGAATGGTGCTTCATGAGCTGGGCGCCGTACGAAGCCGGGTCCGGGAATCGATGGAG
CCCGACACCGTCTTTGACGGCCACGACCGGTGCGTTCTGGCGCCGCCACCGGCATACGAAGCCTCTGCGGGAGGG
CAGCGGGCGGCGAGCGCCAACGAGGAGATCAGGGCCCTGGTAGCGCACAAGGCGGCCATTCAGCGGCGTATCGAG
GAGCTGGAGAGGGATAATTCCGAGGGGGGTGAAGTCAGGGGTCTCTAG
Transcript >Ophcf2|00209
ATGCCGCTGCAGCCTGAGCCTGGCAGAGCGAGGGGTCCCCTGTTGCCGACTTCGACCGCTGCGTCCCCGTCGCCT
CCGCCGAGGCAGAAGCCAAGCCAGACTCCATCGGGTCTGGCCTTGCCGCCCATGACGACGCACTGGACCAAACCT
CAAAGCTGCACATGGACATACGTCGCCGATGGACATTTTGGAAGGGCCTCCAAGGGAGCCATCGCCTGGCTGGAC
CTCGAGCCCGTGCCCGGAGCGAGCACCTTGTCGTGCTACCCAGACGGCATGTTCTTTGAAGGGCGCACCGGCATT
TTCAGCCCGGCCACTTGCCCCGACGGCTGGTTCACCGTGACGGTCCAGGTCGGTCACGTAGCCGAGACGCTTCAT
CCGACGACTACGGCCGTCTGCTGCTCCTCCTACTACTCGTATGACGGCTCTCACTGCAAAAGGTCGGTGCCCACG
GCCCTGGCTGTCCCCATCAGCTACGACCGCGTGGCCGGAACGCACGAGGTCATGGTCAACTCGACCACAACCCTG
TACAGCGCCACGATAGCCGTCAACGCCATCCGGGCCCTCTTCATGGAGCAGGACAAACACCTCTTGGGCCTGACG
GACGACGAGGAGATCAGACACGAAGAGGACGAGGCGACGACGACTTCGCTGTCCTTGGGAGCGCGAATCGGCATC
GCCATTGGCGTCACCGTGATCGCGCTATTGTCTCTGGGAGCCATCTCGTTCTGCCTCTTCCGATGGCGCCACTCG
CGGAGGAGGAGAGCCAAGAGAATGGTGCTTCATGAGCTGGGCGCCGTACGAAGCCGGGTCCGGGAATCGATGGAG
CCCGACACCGTCTTTGACGGCCACGACCGGTGCGTTCTGGCGCCGCCACCGGCATACGAAGCCTCTGCGGGAGGG
CAGCGGGCGGCGAGCGCCAACGAGGAGATCAGGGCCCTGGTAGCGCACAAGGCGGCCATTCAGCGGCGTATCGAG
GAGCTGGAGAGGGATAATTCCGAGGGGGGTGAAGTCAGGGGTCTCTAG
Gene >Ophcf2|00209
ATGCCGCTGCAGCCTGAGCCTGGCAGAGCGAGGGGTCCCCTGTTGCCGACTTCGACCGCTGCGTCCCCGTCGCCT
CCGCCGAGGCAGAAGCCAAGCCAGACTCCATCGGGTCTGGCCTTGCCGCCCATGACGACGCACTGGACCAAACCT
CAAAGCTGCACATGGACATACGTCGCCGATGGACATTTTGGAAGGGCCTCCAAGGGAGCCATCGCCTGGCTGGAC
CTCGAGCCCGTGCCCGGAGCGAGCACCTTGTCGTGCTACCCAGACGGCATGTTCTTTGAAGGGCGCACCGGCATT
TTCAGCCCGGCCACTTGCCCCGACGGCTGGTTCACCGTGACGGTCCAGGTCGGTCACGTAGCCGAGACGCTTCAT
CCGACGACTACGGCCGTCTGCTGCTCCTCGTCGGTGCCAACGCTCTTCTTTGTTCCATTCTTTCCCTCTTCTTCT
TTTTCTTTCTTCACACTTCTCTCTCTCTCTCTCTTTCTCTCTCTTCCCGTCTCGTATGTGCCGCGACTGCTGACA
GCCCTCGCGTTAGCTACTACTCGTATGACGGCTCTCACTGCAAAAGGTCGGTGCCCACGGCCCTGGCTGTCCCCA
TCAGCTACGACCGCGTGGCCGGAACGCACGAGGTCATGGTCAACTCGACCACAACCCTGTACAGCGCCACGATAG
CCGTCAACGCCATCCGGGCCCTCTTCATGGAGCAGGACAAACACCTCTTGGGCCTGACGGACGACGAGGAGATCA
GACACGAAGAGGACGAGGCGACGACGACTTCGCTGTCCTTGGGAGCGCGAATCGGCATCGCCATTGGCGTCACCG
TGATCGCGCTATTGTCTCTGGGAGCCATCTCGTTCTGCCTCTTCCGATGGCGCCACTCGCGGAGGAGGAGAGCCA
AGAGAATGGTGCTTCATGAGCTGGGCGCCGTACGAAGCCGGGTCCGGGAATCGATGGAGCCCGACACCGTCTTTG
ACGGCCACGACCGGTGCGTTCTGGCGCCGCCACCGGCATACGAAGCCTCTGCGGGAGGGCAGCGGGCGGCGAGCG
CCAACGAGGAGATCAGGGCCCTGGTAGCGCACAAGGCGGCCATTCAGCGGCGTATCGAGGAGCTGGAGAGGGATA
ATTCCGAGGGGGGTGAAGTCAGGGGTCTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail