Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00201
Gene name
Locationscaffold_01:1168306..1169034
Strand+
Gene length (bp)728
Transcript length (bp)456
Coding sequence length (bp)456
Protein length (aa) 152

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00505 HMG_box HMG (high mobility group) box 8.6E-25 76 144
PF09011 HMG_box_2 HMG-box domain 3.7E-17 73 144

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.4184 0.7072 0.1134 0.0701 0.1716 0.0884 0.0659 0.0145 0.0444 0.0174

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
HMG

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup3795
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5383
Ophiocordyceps australis map64 (Brazil) OphauB2|2954
Ophiocordyceps camponoti-floridani Ophcf2|00201 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|6256
Ophiocordyceps kimflemingae Ophio5|6554
Ophiocordyceps subramaniannii Hirsu2|7404

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00201
MSWWWMARVSLLRWSLTPPLQISQAQYISAFRCLSTRLSSLQSTLFFSRISKMPKAAAGKRGKEVKKRGKKDPNA
PKRGLSAYMFFANEQRENVREENPGISFGQVGKILGERWKALNEKQRAPYEAKAAADKKRYEDEKQAYNAEADDS
S*
Coding >Ophcf2|00201
ATGAGCTGGTGGTGGATGGCGCGCGTGTCGCTGCTTCGGTGGTCGCTGACACCGCCGTTGCAGATATCGCAGGCG
CAATACATCTCGGCCTTCAGGTGTCTCTCTACTCGTCTCTCTTCCCTTCAATCAACACTCTTCTTCTCCCGCATC
AGCAAAATGCCCAAGGCAGCCGCCGGGAAGCGTGGCAAGGAGGTAAAGAAGCGCGGCAAGAAAGACCCCAATGCC
CCCAAGCGCGGCCTCTCAGCCTACATGTTTTTCGCCAACGAGCAGCGCGAGAACGTACGCGAGGAGAACCCCGGC
ATCTCGTTTGGCCAAGTCGGAAAGATTCTAGGCGAGCGATGGAAGGCTCTTAATGAGAAGCAGCGCGCTCCCTAC
GAAGCCAAGGCTGCAGCCGACAAGAAGCGATACGAGGACGAAAAACAAGCGTACAACGCCGAGGCCGATGATTCT
TCCTAG
Transcript >Ophcf2|00201
ATGAGCTGGTGGTGGATGGCGCGCGTGTCGCTGCTTCGGTGGTCGCTGACACCGCCGTTGCAGATATCGCAGGCG
CAATACATCTCGGCCTTCAGGTGTCTCTCTACTCGTCTCTCTTCCCTTCAATCAACACTCTTCTTCTCCCGCATC
AGCAAAATGCCCAAGGCAGCCGCCGGGAAGCGTGGCAAGGAGGTAAAGAAGCGCGGCAAGAAAGACCCCAATGCC
CCCAAGCGCGGCCTCTCAGCCTACATGTTTTTCGCCAACGAGCAGCGCGAGAACGTACGCGAGGAGAACCCCGGC
ATCTCGTTTGGCCAAGTCGGAAAGATTCTAGGCGAGCGATGGAAGGCTCTTAATGAGAAGCAGCGCGCTCCCTAC
GAAGCCAAGGCTGCAGCCGACAAGAAGCGATACGAGGACGAAAAACAAGCGTACAACGCCGAGGCCGATGATTCT
TCCTAG
Gene >Ophcf2|00201
ATGAGCTGGTGGTGGATGGCGCGCGTGTCGCTGCTTCGGTGGTCGCTGACACCGCCGTTGCAGATATCGCAGGCG
CAAGTGGGTTCGCCAGTCGCGTTGTGCACCACCCCCCCCCTTCCCCCCAAAAAAACACGTCTCTTACGCGTCCTG
ATTCTTTTATTTCACGCGTCACCGCTTGACTAACAGTGCTCTTTTTTACCCAGTACATCTCGGCCTTCAGGTGTC
TCTCTACTCGTCTCTCTTCCCTTCAATCAACACTCTTCTTCTCCCGCATCAGCAAAATGCCCAAGGCAGCCGCCG
GGAAGCGTGGCAAGGAGGTAAAGAAGCGCGGCAAGAAAGGTTAGCATCTCAACCTCGGCCCGTTCTTGCCCTTTC
TCTCTGGCCTTTCTCTCTAAAGGGCTACTCTAACGGGCTATCCCACTCAAAGACCCCAATGCCCCCAAGCGCGGC
CTCTCAGCCTACATGTTTTTCGCCAACGAGCAGCGCGAGAACGTACGCGAGGAGAACCCCGGCATCTCGTTTGGC
CAAGTCGGAAAGATTCTAGGCGAGCGATGGAAGGCTCTTAATGAGAAGCAGCGCGCTCCCTACGAAGCCAAGGCT
GCAGCCGACAAGAAGCGATACGAGGACGAAAAACAAGCGTACAACGTATGATGAAATCCTCGCGTGTTACGGATG
AAGAAGACTAGGGAAACTAACTGGAATAGGCCGAGGCCGATGATTCTTCCTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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