Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00182
Gene name
Locationscaffold_01:1106292..1107618
Strand+
Gene length (bp)1326
Transcript length (bp)1254
Coding sequence length (bp)1254
Protein length (aa) 418

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 36 0.45

Transmembrane Domains

Domain # Start End Length
1 62 81 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00182
MSPVDVAMMDGGRGFAIQAKRALGLLVSRDVLVDAADRVGDVKTAFSSWGSCMKVGYCKWPVIAVIVVGSLFVFS
IVWCIIRRLCCGLACCCSCCQCLRCCGNCCGCCDSPNRRRQHKYLDEPYIPPGHGYQAQPPMQAPQYAQFDVPRK
GGADALPEMPSWESGSSKRVMVEDDEVELNQLNKPNASPPLAQTPTLTGGSTPGYDRHSPVSYQQRAYFDRDANM
SNTGLVQPTPRGPSRPYNLMPQGTGDSFGGRSSPYQRAQRADYPPHPNFYDRQQDYGPQPLVYAPEAGYDTAVSY
PPTHTSPPVEMWPSPPDHHDLDQYQYHQQQQQQQQPTLPPVTPHHQQRRLRLHLGLLASRPEPAPPRRRQRLRIP
ATRPISRRHRLRRAERGWQMASTNYCVINHPWIHEYLAPCLE*
Coding >Ophcf2|00182
ATGTCTCCCGTCGACGTCGCCATGATGGATGGTGGCCGCGGCTTCGCGATACAGGCCAAGCGCGCTCTCGGTCTT
CTCGTCTCGAGGGATGTCCTCGTCGATGCTGCTGATCGCGTTGGCGATGTCAAGACGGCCTTTTCCAGCTGGGGC
AGCTGTATGAAGGTCGGCTACTGCAAGTGGCCAGTCATCGCCGTCATCGTCGTCGGCAGCCTCTTCGTCTTCAGC
ATCGTCTGGTGCATCATCCGACGTCTCTGCTGCGGCCTCGCCTGCTGCTGCTCCTGCTGTCAATGCCTCCGCTGC
TGCGGTAACTGCTGCGGCTGCTGCGATAGCCCTAACAGAAGACGCCAGCACAAATACCTCGACGAGCCCTACATC
CCCCCGGGTCACGGCTACCAGGCCCAGCCCCCGATGCAGGCGCCTCAATACGCCCAGTTCGACGTGCCCCGCAAG
GGAGGAGCGGATGCCCTGCCCGAGATGCCCAGCTGGGAGTCTGGCAGCTCCAAGAGGGTCATGGTCGAGGACGAC
GAGGTGGAATTGAACCAGCTCAATAAGCCCAACGCCTCGCCTCCTCTCGCCCAGACGCCTACCCTCACTGGCGGC
TCAACACCCGGCTACGACCGTCACTCGCCCGTCTCGTACCAACAGCGCGCCTACTTTGACCGCGACGCCAACATG
AGCAACACCGGTCTCGTCCAGCCCACGCCCAGGGGCCCCTCTCGCCCTTATAACCTGATGCCTCAGGGCACCGGC
GATAGCTTCGGCGGTCGATCGTCTCCTTACCAGAGAGCCCAGAGAGCCGACTATCCTCCCCACCCCAACTTCTAC
GACCGCCAGCAAGACTACGGCCCCCAACCGCTTGTTTACGCCCCGGAAGCCGGCTACGACACCGCCGTCTCCTAC
CCCCCGACGCACACGTCGCCTCCAGTCGAGATGTGGCCCTCGCCGCCGGATCATCATGACCTTGACCAATACCAA
TACCATCAACAGCAGCAGCAGCAGCAGCAGCCCACTCTCCCCCCAGTCACCCCCCATCACCAACAACGCCGGCTT
CGACTTCACCTCGGGCTACTCGCGTCCCGCCCCGAGCCCGCGCCCCCCCGCCGTCGACAACGCCTGCGTATCCCG
GCTACAAGGCCTATCAGCCGCCGTCACCGCCTGCGGCGAGCTGAGAGGGGCTGGCAGATGGCGTCTACCAACTAC
TGTGTTATAAACCACCCATGGATTCATGAATATCTAGCACCATGTCTGGAGTAG
Transcript >Ophcf2|00182
ATGTCTCCCGTCGACGTCGCCATGATGGATGGTGGCCGCGGCTTCGCGATACAGGCCAAGCGCGCTCTCGGTCTT
CTCGTCTCGAGGGATGTCCTCGTCGATGCTGCTGATCGCGTTGGCGATGTCAAGACGGCCTTTTCCAGCTGGGGC
AGCTGTATGAAGGTCGGCTACTGCAAGTGGCCAGTCATCGCCGTCATCGTCGTCGGCAGCCTCTTCGTCTTCAGC
ATCGTCTGGTGCATCATCCGACGTCTCTGCTGCGGCCTCGCCTGCTGCTGCTCCTGCTGTCAATGCCTCCGCTGC
TGCGGTAACTGCTGCGGCTGCTGCGATAGCCCTAACAGAAGACGCCAGCACAAATACCTCGACGAGCCCTACATC
CCCCCGGGTCACGGCTACCAGGCCCAGCCCCCGATGCAGGCGCCTCAATACGCCCAGTTCGACGTGCCCCGCAAG
GGAGGAGCGGATGCCCTGCCCGAGATGCCCAGCTGGGAGTCTGGCAGCTCCAAGAGGGTCATGGTCGAGGACGAC
GAGGTGGAATTGAACCAGCTCAATAAGCCCAACGCCTCGCCTCCTCTCGCCCAGACGCCTACCCTCACTGGCGGC
TCAACACCCGGCTACGACCGTCACTCGCCCGTCTCGTACCAACAGCGCGCCTACTTTGACCGCGACGCCAACATG
AGCAACACCGGTCTCGTCCAGCCCACGCCCAGGGGCCCCTCTCGCCCTTATAACCTGATGCCTCAGGGCACCGGC
GATAGCTTCGGCGGTCGATCGTCTCCTTACCAGAGAGCCCAGAGAGCCGACTATCCTCCCCACCCCAACTTCTAC
GACCGCCAGCAAGACTACGGCCCCCAACCGCTTGTTTACGCCCCGGAAGCCGGCTACGACACCGCCGTCTCCTAC
CCCCCGACGCACACGTCGCCTCCAGTCGAGATGTGGCCCTCGCCGCCGGATCATCATGACCTTGACCAATACCAA
TACCATCAACAGCAGCAGCAGCAGCAGCAGCCCACTCTCCCCCCAGTCACCCCCCATCACCAACAACGCCGGCTT
CGACTTCACCTCGGGCTACTCGCGTCCCGCCCCGAGCCCGCGCCCCCCCGCCGTCGACAACGCCTGCGTATCCCG
GCTACAAGGCCTATCAGCCGCCGTCACCGCCTGCGGCGAGCTGAGAGGGGCTGGCAGATGGCGTCTACCAACTAC
TGTGTTATAAACCACCCATGGATTCATGAATATCTAGCACCATGTCTGGAGTAG
Gene >Ophcf2|00182
ATGTCTCCCGTCGACGTCGCCATGATGGATGGTGGCCGCGGCTTCGCGATACAGGCCAAGCGCGCTCTCGGTCTT
CTCGTCTCGAGGGATGTCCTCGTCGATGCTGCTGATCGCGTTGGCGATGTCAAGACGGCCTTTTCCAGCTGGGGC
AGCTGTATGAAGGTCGGCTACTGCAAGTACGAACACAACATTGTCCTTCTCTCTCACACATGTTCTCTTCTGATG
CTAATGACTTCCCCCCCAAACAGGTGGCCAGTCATCGCCGTCATCGTCGTCGGCAGCCTCTTCGTCTTCAGCATC
GTCTGGTGCATCATCCGACGTCTCTGCTGCGGCCTCGCCTGCTGCTGCTCCTGCTGTCAATGCCTCCGCTGCTGC
GGTAACTGCTGCGGCTGCTGCGATAGCCCTAACAGAAGACGCCAGCACAAATACCTCGACGAGCCCTACATCCCC
CCGGGTCACGGCTACCAGGCCCAGCCCCCGATGCAGGCGCCTCAATACGCCCAGTTCGACGTGCCCCGCAAGGGA
GGAGCGGATGCCCTGCCCGAGATGCCCAGCTGGGAGTCTGGCAGCTCCAAGAGGGTCATGGTCGAGGACGACGAG
GTGGAATTGAACCAGCTCAATAAGCCCAACGCCTCGCCTCCTCTCGCCCAGACGCCTACCCTCACTGGCGGCTCA
ACACCCGGCTACGACCGTCACTCGCCCGTCTCGTACCAACAGCGCGCCTACTTTGACCGCGACGCCAACATGAGC
AACACCGGTCTCGTCCAGCCCACGCCCAGGGGCCCCTCTCGCCCTTATAACCTGATGCCTCAGGGCACCGGCGAT
AGCTTCGGCGGTCGATCGTCTCCTTACCAGAGAGCCCAGAGAGCCGACTATCCTCCCCACCCCAACTTCTACGAC
CGCCAGCAAGACTACGGCCCCCAACCGCTTGTTTACGCCCCGGAAGCCGGCTACGACACCGCCGTCTCCTACCCC
CCGACGCACACGTCGCCTCCAGTCGAGATGTGGCCCTCGCCGCCGGATCATCATGACCTTGACCAATACCAATAC
CATCAACAGCAGCAGCAGCAGCAGCAGCCCACTCTCCCCCCAGTCACCCCCCATCACCAACAACGCCGGCTTCGA
CTTCACCTCGGGCTACTCGCGTCCCGCCCCGAGCCCGCGCCCCCCCGCCGTCGACAACGCCTGCGTATCCCGGCT
ACAAGGCCTATCAGCCGCCGTCACCGCCTGCGGCGAGCTGAGAGGGGCTGGCAGATGGCGTCTACCAACTACTGT
GTTATAAACCACCCATGGATTCATGAATATCTAGCACCATGTCTGGAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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