Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00181
Gene name
Locationscaffold_01:1104207..1104739
Strand+
Gene length (bp)532
Transcript length (bp)462
Coding sequence length (bp)462
Protein length (aa) 154

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12273 RCR Chitin synthesis regulation, resistance to Congo red 5.4E-19 22 151

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cell membrane|Lysosome/Vacuole Signal peptide|Transmembrane domain 0.1608 0.2068 0.122 0.6509 0.1081 0.0019 0.3614 0.7165 0.222 0.0105

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 20 42 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup659
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1518
Ophiocordyceps australis map64 (Brazil) OphauB2|280
Ophiocordyceps australis map64 (Brazil) OphauB2|77
Ophiocordyceps camponoti-floridani Ophcf2|00181 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|7118
Ophiocordyceps kimflemingae Ophio5|8175
Ophiocordyceps subramaniannii Hirsu2|10707

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00181
MAVECFNGVCRRRRPWLNWGIWTFLGLLVVVFLTVFFLFACIARRRRRRGAQPMYGTGWMAPPNKYGGPEAGYHP
QQQQPPPQGYGQAGFAPPPPAYGQPQAQYPQSTGTNFHPNDGYYGDGSQQQHGVQPPATAYQPHNGPYSPPPGPP
PGK*
Coding >Ophcf2|00181
ATGGCGGTCGAATGCTTCAACGGTGTTTGTCGGAGACGCAGGCCTTGGCTTAACTGGGGGATCTGGACGTTTCTA
GGACTTCTCGTTGTTGTCTTTCTCACCGTCTTCTTCCTCTTTGCATGTATCGCCCGTCGTCGTCGTCGTCGCGGC
GCGCAGCCCATGTATGGCACAGGATGGATGGCGCCGCCCAATAAATACGGAGGTCCCGAGGCCGGATATCACCCG
CAGCAGCAGCAGCCGCCGCCGCAGGGCTACGGACAGGCTGGATTCGCGCCACCGCCGCCGGCATACGGACAACCG
CAGGCGCAGTATCCTCAGTCGACGGGCACCAACTTTCACCCCAACGACGGGTACTACGGCGATGGGTCGCAGCAG
CAGCATGGGGTGCAGCCGCCGGCTACGGCGTACCAGCCTCATAACGGGCCGTATTCGCCGCCGCCGGGGCCGCCG
CCGGGCAAGTGA
Transcript >Ophcf2|00181
ATGGCGGTCGAATGCTTCAACGGTGTTTGTCGGAGACGCAGGCCTTGGCTTAACTGGGGGATCTGGACGTTTCTA
GGACTTCTCGTTGTTGTCTTTCTCACCGTCTTCTTCCTCTTTGCATGTATCGCCCGTCGTCGTCGTCGTCGCGGC
GCGCAGCCCATGTATGGCACAGGATGGATGGCGCCGCCCAATAAATACGGAGGTCCCGAGGCCGGATATCACCCG
CAGCAGCAGCAGCCGCCGCCGCAGGGCTACGGACAGGCTGGATTCGCGCCACCGCCGCCGGCATACGGACAACCG
CAGGCGCAGTATCCTCAGTCGACGGGCACCAACTTTCACCCCAACGACGGGTACTACGGCGATGGGTCGCAGCAG
CAGCATGGGGTGCAGCCGCCGGCTACGGCGTACCAGCCTCATAACGGGCCGTATTCGCCGCCGCCGGGGCCGCCG
CCGGGCAAGTGA
Gene >Ophcf2|00181
ATGGCGGTCGAATGCTTCAACGGTGTTTGTCGGAGACGCAGGCCTTGGCTTAACTGGGGGATCTGGACGTTTCTA
GGACTTCTCGTTGTTGTCTTTCTCACCGTCTTCTTCCTCTTTGCGTGAGTGGCGAGCATTGTCTGGTATCTTGAC
GGGTTTGACTGACGATGATGGGTGGGGGCGGGATCACAGATGTATCGCCCGTCGTCGTCGTCGTCGCGGCGCGCA
GCCCATGTATGGCACAGGATGGATGGCGCCGCCCAATAAATACGGAGGTCCCGAGGCCGGATATCACCCGCAGCA
GCAGCAGCCGCCGCCGCAGGGCTACGGACAGGCTGGATTCGCGCCACCGCCGCCGGCATACGGACAACCGCAGGC
GCAGTATCCTCAGTCGACGGGCACCAACTTTCACCCCAACGACGGGTACTACGGCGATGGGTCGCAGCAGCAGCA
TGGGGTGCAGCCGCCGGCTACGGCGTACCAGCCTCATAACGGGCCGTATTCGCCGCCGCCGGGGCCGCCGCCGGG
CAAGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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