Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00169
Gene name
Locationscaffold_01:1071066..1072364
Strand-
Gene length (bp)1298
Transcript length (bp)1239
Coding sequence length (bp)1239
Protein length (aa) 413

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03124 EXS EXS family 2.8E-107 18 380

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0005575 cellular_component No
GO:0031224 intrinsic component of membrane No
GO:0110165 cellular anatomical entity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 15 37 22
2 73 95 22
3 99 121 22
4 267 289 22
5 316 338 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00169
MDGDATVEPQLDSFSLVFPLPYRVGFIVTLAVWGWGLNLQYLGLIKIDVPALIRYPGRSLSHHVVPYASTYRLAT
ALSCLLGLSISLFWLLTWRVPSRVIAYDWLPMSYLVALVAIFLVPHRSLPLTGRRRLLTMLRRVSLGGIAETHEG
KFGDILLADVLTSYAKVCGDLFVALCMFLTPGGSSTDRPDRNCGGAVIVPLLMAFPSLIRLRQCITEYLRVRRAS
YKESTGWGGQHLANALKYSTAFPVIITSSLQRNLPGETTKTALNRAWLVAVLVNSLYSFYWDVAKDWDMTLFSAR
WKRNSPYHAWGLRDRLIFRPVGLYYAVIVLDLALRCTWSMKLSPHLYRFSDFESGIFLIEVLEVLRRWVWIFFRV
ETEWIRNSLTGVGVDDILLGDYQGKDDDDDDDDDDHD*
Coding >Ophcf2|00169
ATGGACGGCGATGCTACAGTTGAACCGCAGCTCGACTCCTTCAGCCTCGTGTTCCCGCTGCCGTACCGCGTCGGC
TTCATCGTGACACTCGCCGTTTGGGGATGGGGCCTCAACCTGCAATATCTCGGCCTCATCAAGATAGACGTGCCG
GCTTTGATACGATACCCGGGCCGGTCATTGTCGCATCATGTCGTCCCTTACGCCTCAACATATCGACTCGCCACA
GCGCTATCGTGCCTCTTGGGCCTTTCCATCTCTCTCTTCTGGCTCTTGACGTGGCGCGTGCCTTCGCGCGTCATC
GCTTACGACTGGCTGCCCATGTCGTATCTCGTCGCTCTCGTCGCCATCTTTCTCGTGCCCCATCGCAGCCTACCC
TTGACTGGTCGTCGGCGCCTTCTGACCATGCTTCGCCGCGTCTCCTTGGGCGGAATCGCCGAGACGCATGAGGGC
AAGTTTGGCGACATCTTGCTGGCCGATGTCTTGACGTCGTACGCCAAAGTCTGCGGTGACCTCTTCGTCGCCCTC
TGCATGTTTCTCACCCCAGGCGGCTCCTCGACTGACCGGCCGGACCGCAACTGCGGGGGCGCCGTCATCGTGCCT
CTGCTCATGGCTTTCCCCAGCCTGATCCGGCTGAGGCAGTGCATCACCGAGTATCTGCGCGTGCGTCGCGCCTCG
TACAAGGAGTCGACGGGCTGGGGAGGGCAGCATCTGGCCAACGCCCTCAAGTACTCGACGGCGTTTCCCGTCATC
ATCACGAGCTCGCTGCAGAGGAACCTGCCGGGCGAGACGACGAAGACGGCCCTCAACAGGGCTTGGCTGGTAGCC
GTACTCGTCAACTCGCTCTACTCCTTCTACTGGGACGTGGCCAAGGACTGGGACATGACGCTGTTCTCGGCCCGC
TGGAAGCGCAACTCGCCCTACCACGCCTGGGGGCTTCGAGACCGTCTCATATTCCGTCCCGTCGGCTTGTACTAC
GCCGTTATTGTCCTCGATCTGGCGCTGCGTTGTACCTGGTCGATGAAGCTCAGTCCTCACCTCTACAGGTTCAGC
GATTTCGAGAGCGGCATCTTTCTGATCGAGGTTCTCGAAGTGCTGCGACGCTGGGTATGGATCTTTTTCCGCGTC
GAAACAGAGTGGATAAGGAACTCGCTCACCGGCGTCGGCGTCGACGACATTCTGCTCGGCGACTACCAAGGAAAG
GATGATGATGATGATGATGATGATGATGATCATGATTAG
Transcript >Ophcf2|00169
ATGGACGGCGATGCTACAGTTGAACCGCAGCTCGACTCCTTCAGCCTCGTGTTCCCGCTGCCGTACCGCGTCGGC
TTCATCGTGACACTCGCCGTTTGGGGATGGGGCCTCAACCTGCAATATCTCGGCCTCATCAAGATAGACGTGCCG
GCTTTGATACGATACCCGGGCCGGTCATTGTCGCATCATGTCGTCCCTTACGCCTCAACATATCGACTCGCCACA
GCGCTATCGTGCCTCTTGGGCCTTTCCATCTCTCTCTTCTGGCTCTTGACGTGGCGCGTGCCTTCGCGCGTCATC
GCTTACGACTGGCTGCCCATGTCGTATCTCGTCGCTCTCGTCGCCATCTTTCTCGTGCCCCATCGCAGCCTACCC
TTGACTGGTCGTCGGCGCCTTCTGACCATGCTTCGCCGCGTCTCCTTGGGCGGAATCGCCGAGACGCATGAGGGC
AAGTTTGGCGACATCTTGCTGGCCGATGTCTTGACGTCGTACGCCAAAGTCTGCGGTGACCTCTTCGTCGCCCTC
TGCATGTTTCTCACCCCAGGCGGCTCCTCGACTGACCGGCCGGACCGCAACTGCGGGGGCGCCGTCATCGTGCCT
CTGCTCATGGCTTTCCCCAGCCTGATCCGGCTGAGGCAGTGCATCACCGAGTATCTGCGCGTGCGTCGCGCCTCG
TACAAGGAGTCGACGGGCTGGGGAGGGCAGCATCTGGCCAACGCCCTCAAGTACTCGACGGCGTTTCCCGTCATC
ATCACGAGCTCGCTGCAGAGGAACCTGCCGGGCGAGACGACGAAGACGGCCCTCAACAGGGCTTGGCTGGTAGCC
GTACTCGTCAACTCGCTCTACTCCTTCTACTGGGACGTGGCCAAGGACTGGGACATGACGCTGTTCTCGGCCCGC
TGGAAGCGCAACTCGCCCTACCACGCCTGGGGGCTTCGAGACCGTCTCATATTCCGTCCCGTCGGCTTGTACTAC
GCCGTTATTGTCCTCGATCTGGCGCTGCGTTGTACCTGGTCGATGAAGCTCAGTCCTCACCTCTACAGGTTCAGC
GATTTCGAGAGCGGCATCTTTCTGATCGAGGTTCTCGAAGTGCTGCGACGCTGGGTATGGATCTTTTTCCGCGTC
GAAACAGAGTGGATAAGGAACTCGCTCACCGGCGTCGGCGTCGACGACATTCTGCTCGGCGACTACCAAGGAAAG
GATGATGATGATGATGATGATGATGATGATCATGATTAG
Gene >Ophcf2|00169
ATGGACGGCGATGCTACAGTTGAACCGCAGCTCGACTCCTTCAGCCTCGTGTTCCCGCTGCCGTACCGCGTCGGC
TTCATCGTGACACTCGGTCAGTCCGTTTCTGTGCTCGGAATACCTCGGGAACGCCTGAGTTAACGTCGAACGCAG
CCGTTTGGGGATGGGGCCTCAACCTGCAATATCTCGGCCTCATCAAGATAGACGTGCCGGCTTTGATACGATACC
CGGGCCGGTCATTGTCGCATCATGTCGTCCCTTACGCCTCAACATATCGACTCGCCACAGCGCTATCGTGCCTCT
TGGGCCTTTCCATCTCTCTCTTCTGGCTCTTGACGTGGCGCGTGCCTTCGCGCGTCATCGCTTACGACTGGCTGC
CCATGTCGTATCTCGTCGCTCTCGTCGCCATCTTTCTCGTGCCCCATCGCAGCCTACCCTTGACTGGTCGTCGGC
GCCTTCTGACCATGCTTCGCCGCGTCTCCTTGGGCGGAATCGCCGAGACGCATGAGGGCAAGTTTGGCGACATCT
TGCTGGCCGATGTCTTGACGTCGTACGCCAAAGTCTGCGGTGACCTCTTCGTCGCCCTCTGCATGTTTCTCACCC
CAGGCGGCTCCTCGACTGACCGGCCGGACCGCAACTGCGGGGGCGCCGTCATCGTGCCTCTGCTCATGGCTTTCC
CCAGCCTGATCCGGCTGAGGCAGTGCATCACCGAGTATCTGCGCGTGCGTCGCGCCTCGTACAAGGAGTCGACGG
GCTGGGGAGGGCAGCATCTGGCCAACGCCCTCAAGTACTCGACGGCGTTTCCCGTCATCATCACGAGCTCGCTGC
AGAGGAACCTGCCGGGCGAGACGACGAAGACGGCCCTCAACAGGGCTTGGCTGGTAGCCGTACTCGTCAACTCGC
TCTACTCCTTCTACTGGGACGTGGCCAAGGACTGGGACATGACGCTGTTCTCGGCCCGCTGGAAGCGCAACTCGC
CCTACCACGCCTGGGGGCTTCGAGACCGTCTCATATTCCGTCCCGTCGGCTTGTACTACGCCGTTATTGTCCTCG
ATCTGGCGCTGCGTTGTACCTGGTCGATGAAGCTCAGTCCTCACCTCTACAGGTTCAGCGATTTCGAGAGCGGCA
TCTTTCTGATCGAGGTTCTCGAAGTGCTGCGACGCTGGGTATGGATCTTTTTCCGCGTCGAAACAGAGTGGATAA
GGAACTCGCTCACCGGCGTCGGCGTCGACGACATTCTGCTCGGCGACTACCAAGGAAAGGATGATGATGATGATG
ATGATGATGATGATCATGATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail