Protein ID | Ophcf2|00135 |
Gene name | |
Location | scaffold_01:967671..969780 |
Strand | + |
Gene length (bp) | 2109 |
Transcript length (bp) | 2109 |
Coding sequence length (bp) | 2109 |
Protein length (aa) | 703 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01375 | Enterotoxin_a | Heat-labile enterotoxin alpha chain | 1.8E-21 | 72 | 259 |
PF01375 | Enterotoxin_a | Heat-labile enterotoxin alpha chain | 1.7E-10 | 316 | 494 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005615 | extracellular space | Yes |
GO:0090729 | toxin activity | Yes |
GO:0005575 | cellular_component | No |
GO:0003674 | molecular_function | No |
GO:0110165 | cellular anatomical entity | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.2314 | 0.1505 | 0.7908 | 0.2404 | 0.1319 | 0.1939 | 0.3877 | 0.3431 | 0.3398 | 0.0091 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 43 | 0.834587 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 569 | 591 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 283 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|00135 MSRRAKAAGLPLTSVQEMTVKSRAMTWLPLACMAMLLFQGGHAAHEPSTETSSTVNSLRQPGEIVWRGEYRKTPE EAEKAGGLLSPCLEKDGQGAIFSHSDLNDGASLYAHSKMETGAVSQYVSVTENLAAAFWLANAQQFDEYGVNEPI YLYKIHADQWMIPVRASLGNYSSSKLRGELCVVGRIPWNQIMGWYEINDTATDLADIGYGINIHPAFHVNPKYNA ALYDRQRIVGQPQPSLAGFPLRSAAWGQEPWRKYRGNAVFSLLGRFVWRKVCLRRVSCYVKRRPRPRPISRSKTD DGNKKPAIRTDPPHHLFIGHYLWPQEAMKQGGFPPAADHLYRGHEAPDRAYALTEHLDLNNHRRSSFYVPAFENF GAAAEYAVKLSNHHTPGFEGVVYLVSATPNMIDIGLSIGKYYGNMDPTKQRFAVVGGVLWTQVLGWLMVPANYTR PLTSLVTNKTGLHSQLKSVFQQHQNYFVPNPDYDSDRFQNLTANSQGQPQLFRSSKPKAALQKFMRLYGASVGWD GSFPLIGGKADFWTIITGGMSASAKSVGNVSHPHDLSKLRLSAIWAFMSFNVVAWSIMPAMVVAFVLQSTGVAIA AELLANIGVDAVESAGILFDAASEATVDAGSELGASIGGESGSGAAGAVAGEAGVAGEGGSLISSEMYNEVAELP VEQAEAERLKDLLQEPELPAVPIAPAA* |
Coding | >Ophcf2|00135 ATGAGCCGCAGAGCAAAAGCCGCCGGACTTCCTCTCACGTCCGTCCAGGAGATGACCGTCAAGAGTCGGGCCATG ACCTGGCTGCCTCTTGCATGTATGGCTATGCTGCTGTTTCAAGGTGGCCACGCAGCCCATGAGCCATCGACGGAG ACCAGTTCTACCGTTAATTCTCTTCGTCAACCTGGCGAAATTGTCTGGCGCGGCGAGTACAGAAAAACGCCAGAA GAGGCCGAGAAAGCCGGTGGACTACTTTCGCCCTGCCTGGAGAAAGATGGTCAAGGAGCCATCTTCAGCCACAGC GACCTCAATGACGGCGCCAGTCTGTACGCGCACTCCAAGATGGAAACGGGAGCAGTCTCGCAGTATGTATCGGTC ACCGAGAATCTCGCAGCTGCCTTTTGGCTTGCCAATGCTCAACAATTCGACGAATATGGCGTCAATGAGCCCATC TACCTCTACAAGATTCATGCCGACCAATGGATGATTCCCGTCCGAGCCTCTCTGGGAAATTATTCTTCCTCAAAG CTCAGAGGCGAGCTATGTGTCGTGGGCAGGATTCCGTGGAACCAGATCATGGGATGGTATGAAATTAACGACACA GCGACTGACTTGGCCGACATCGGCTATGGCATCAACATCCATCCCGCTTTCCATGTTAACCCAAAGTATAACGCC GCCTTGTACGACCGCCAGCGCATCGTGGGCCAGCCACAGCCGTCACTTGCCGGCTTTCCCCTTCGCTCCGCCGCT TGGGGTCAGGAACCATGGCGCAAGTACCGCGGCAATGCAGTGTTCAGTCTCCTGGGCCGTTTTGTCTGGCGCAAA GTGTGCCTGAGGAGAGTGTCCTGCTATGTCAAGCGCCGCCCTCGTCCTCGGCCGATATCACGATCAAAAACGGAT GACGGAAACAAAAAGCCGGCCATACGGACCGACCCTCCCCATCATCTCTTCATCGGTCACTATCTGTGGCCACAG GAGGCTATGAAGCAGGGCGGCTTCCCGCCCGCGGCCGACCACCTTTACCGGGGCCACGAAGCCCCGGATAGGGCA TACGCGCTCACGGAGCACCTCGACTTGAACAACCATCGACGGTCAAGCTTCTACGTGCCGGCCTTTGAGAACTTT GGCGCCGCAGCGGAATACGCCGTCAAATTGTCCAACCACCACACTCCCGGCTTTGAAGGCGTCGTCTACCTCGTC AGTGCCACGCCCAACATGATCGACATCGGCCTGTCAATAGGCAAATATTATGGCAACATGGATCCTACCAAGCAG CGATTCGCCGTCGTGGGGGGCGTCTTGTGGACTCAGGTCCTCGGCTGGCTCATGGTGCCGGCCAACTACACCAGG CCTTTGACGAGTCTGGTGACCAACAAGACGGGTCTGCATTCGCAATTGAAGAGCGTCTTCCAGCAGCACCAGAAC TACTTCGTCCCCAACCCAGATTACGACAGTGACCGCTTCCAGAACCTCACGGCCAACAGTCAAGGGCAGCCACAG CTCTTCCGATCGTCCAAGCCCAAGGCGGCCTTGCAAAAGTTCATGCGGCTCTATGGAGCGTCCGTCGGCTGGGAT GGCAGCTTTCCCCTCATTGGCGGCAAGGCCGATTTCTGGACCATCATCACGGGCGGCATGTCCGCCTCGGCCAAG TCTGTAGGCAATGTAAGCCATCCACACGACTTATCAAAATTGAGGTTAAGCGCAATCTGGGCCTTCATGTCGTTC AACGTCGTCGCTTGGTCCATCATGCCAGCCATGGTCGTCGCCTTCGTCCTCCAAAGCACAGGCGTGGCCATAGCA GCCGAATTGCTAGCCAACATAGGTGTCGACGCCGTCGAAAGCGCCGGCATCTTGTTCGATGCCGCTTCCGAAGCG ACAGTAGACGCCGGCTCTGAACTCGGAGCAAGCATCGGGGGCGAATCGGGGTCGGGCGCTGCAGGGGCCGTGGCT GGAGAGGCTGGAGTAGCTGGAGAGGGCGGATCCTTGATATCATCCGAAATGTACAACGAAGTGGCCGAGCTGCCC GTCGAGCAGGCTGAAGCCGAGCGGCTCAAGGATCTGCTTCAAGAGCCGGAACTCCCGGCCGTTCCTATTGCCCCG GCTGCGTGA |
Transcript | >Ophcf2|00135 ATGAGCCGCAGAGCAAAAGCCGCCGGACTTCCTCTCACGTCCGTCCAGGAGATGACCGTCAAGAGTCGGGCCATG ACCTGGCTGCCTCTTGCATGTATGGCTATGCTGCTGTTTCAAGGTGGCCACGCAGCCCATGAGCCATCGACGGAG ACCAGTTCTACCGTTAATTCTCTTCGTCAACCTGGCGAAATTGTCTGGCGCGGCGAGTACAGAAAAACGCCAGAA GAGGCCGAGAAAGCCGGTGGACTACTTTCGCCCTGCCTGGAGAAAGATGGTCAAGGAGCCATCTTCAGCCACAGC GACCTCAATGACGGCGCCAGTCTGTACGCGCACTCCAAGATGGAAACGGGAGCAGTCTCGCAGTATGTATCGGTC ACCGAGAATCTCGCAGCTGCCTTTTGGCTTGCCAATGCTCAACAATTCGACGAATATGGCGTCAATGAGCCCATC TACCTCTACAAGATTCATGCCGACCAATGGATGATTCCCGTCCGAGCCTCTCTGGGAAATTATTCTTCCTCAAAG CTCAGAGGCGAGCTATGTGTCGTGGGCAGGATTCCGTGGAACCAGATCATGGGATGGTATGAAATTAACGACACA GCGACTGACTTGGCCGACATCGGCTATGGCATCAACATCCATCCCGCTTTCCATGTTAACCCAAAGTATAACGCC GCCTTGTACGACCGCCAGCGCATCGTGGGCCAGCCACAGCCGTCACTTGCCGGCTTTCCCCTTCGCTCCGCCGCT TGGGGTCAGGAACCATGGCGCAAGTACCGCGGCAATGCAGTGTTCAGTCTCCTGGGCCGTTTTGTCTGGCGCAAA GTGTGCCTGAGGAGAGTGTCCTGCTATGTCAAGCGCCGCCCTCGTCCTCGGCCGATATCACGATCAAAAACGGAT GACGGAAACAAAAAGCCGGCCATACGGACCGACCCTCCCCATCATCTCTTCATCGGTCACTATCTGTGGCCACAG GAGGCTATGAAGCAGGGCGGCTTCCCGCCCGCGGCCGACCACCTTTACCGGGGCCACGAAGCCCCGGATAGGGCA TACGCGCTCACGGAGCACCTCGACTTGAACAACCATCGACGGTCAAGCTTCTACGTGCCGGCCTTTGAGAACTTT GGCGCCGCAGCGGAATACGCCGTCAAATTGTCCAACCACCACACTCCCGGCTTTGAAGGCGTCGTCTACCTCGTC AGTGCCACGCCCAACATGATCGACATCGGCCTGTCAATAGGCAAATATTATGGCAACATGGATCCTACCAAGCAG CGATTCGCCGTCGTGGGGGGCGTCTTGTGGACTCAGGTCCTCGGCTGGCTCATGGTGCCGGCCAACTACACCAGG CCTTTGACGAGTCTGGTGACCAACAAGACGGGTCTGCATTCGCAATTGAAGAGCGTCTTCCAGCAGCACCAGAAC TACTTCGTCCCCAACCCAGATTACGACAGTGACCGCTTCCAGAACCTCACGGCCAACAGTCAAGGGCAGCCACAG CTCTTCCGATCGTCCAAGCCCAAGGCGGCCTTGCAAAAGTTCATGCGGCTCTATGGAGCGTCCGTCGGCTGGGAT GGCAGCTTTCCCCTCATTGGCGGCAAGGCCGATTTCTGGACCATCATCACGGGCGGCATGTCCGCCTCGGCCAAG TCTGTAGGCAATGTAAGCCATCCACACGACTTATCAAAATTGAGGTTAAGCGCAATCTGGGCCTTCATGTCGTTC AACGTCGTCGCTTGGTCCATCATGCCAGCCATGGTCGTCGCCTTCGTCCTCCAAAGCACAGGCGTGGCCATAGCA GCCGAATTGCTAGCCAACATAGGTGTCGACGCCGTCGAAAGCGCCGGCATCTTGTTCGATGCCGCTTCCGAAGCG ACAGTAGACGCCGGCTCTGAACTCGGAGCAAGCATCGGGGGCGAATCGGGGTCGGGCGCTGCAGGGGCCGTGGCT GGAGAGGCTGGAGTAGCTGGAGAGGGCGGATCCTTGATATCATCCGAAATGTACAACGAAGTGGCCGAGCTGCCC GTCGAGCAGGCTGAAGCCGAGCGGCTCAAGGATCTGCTTCAAGAGCCGGAACTCCCGGCCGTTCCTATTGCCCCG GCTGCGTGA |
Gene | >Ophcf2|00135 ATGAGCCGCAGAGCAAAAGCCGCCGGACTTCCTCTCACGTCCGTCCAGGAGATGACCGTCAAGAGTCGGGCCATG ACCTGGCTGCCTCTTGCATGTATGGCTATGCTGCTGTTTCAAGGTGGCCACGCAGCCCATGAGCCATCGACGGAG ACCAGTTCTACCGTTAATTCTCTTCGTCAACCTGGCGAAATTGTCTGGCGCGGCGAGTACAGAAAAACGCCAGAA GAGGCCGAGAAAGCCGGTGGACTACTTTCGCCCTGCCTGGAGAAAGATGGTCAAGGAGCCATCTTCAGCCACAGC GACCTCAATGACGGCGCCAGTCTGTACGCGCACTCCAAGATGGAAACGGGAGCAGTCTCGCAGTATGTATCGGTC ACCGAGAATCTCGCAGCTGCCTTTTGGCTTGCCAATGCTCAACAATTCGACGAATATGGCGTCAATGAGCCCATC TACCTCTACAAGATTCATGCCGACCAATGGATGATTCCCGTCCGAGCCTCTCTGGGAAATTATTCTTCCTCAAAG CTCAGAGGCGAGCTATGTGTCGTGGGCAGGATTCCGTGGAACCAGATCATGGGATGGTATGAAATTAACGACACA GCGACTGACTTGGCCGACATCGGCTATGGCATCAACATCCATCCCGCTTTCCATGTTAACCCAAAGTATAACGCC GCCTTGTACGACCGCCAGCGCATCGTGGGCCAGCCACAGCCGTCACTTGCCGGCTTTCCCCTTCGCTCCGCCGCT TGGGGTCAGGAACCATGGCGCAAGTACCGCGGCAATGCAGTGTTCAGTCTCCTGGGCCGTTTTGTCTGGCGCAAA GTGTGCCTGAGGAGAGTGTCCTGCTATGTCAAGCGCCGCCCTCGTCCTCGGCCGATATCACGATCAAAAACGGAT GACGGAAACAAAAAGCCGGCCATACGGACCGACCCTCCCCATCATCTCTTCATCGGTCACTATCTGTGGCCACAG GAGGCTATGAAGCAGGGCGGCTTCCCGCCCGCGGCCGACCACCTTTACCGGGGCCACGAAGCCCCGGATAGGGCA TACGCGCTCACGGAGCACCTCGACTTGAACAACCATCGACGGTCAAGCTTCTACGTGCCGGCCTTTGAGAACTTT GGCGCCGCAGCGGAATACGCCGTCAAATTGTCCAACCACCACACTCCCGGCTTTGAAGGCGTCGTCTACCTCGTC AGTGCCACGCCCAACATGATCGACATCGGCCTGTCAATAGGCAAATATTATGGCAACATGGATCCTACCAAGCAG CGATTCGCCGTCGTGGGGGGCGTCTTGTGGACTCAGGTCCTCGGCTGGCTCATGGTGCCGGCCAACTACACCAGG CCTTTGACGAGTCTGGTGACCAACAAGACGGGTCTGCATTCGCAATTGAAGAGCGTCTTCCAGCAGCACCAGAAC TACTTCGTCCCCAACCCAGATTACGACAGTGACCGCTTCCAGAACCTCACGGCCAACAGTCAAGGGCAGCCACAG CTCTTCCGATCGTCCAAGCCCAAGGCGGCCTTGCAAAAGTTCATGCGGCTCTATGGAGCGTCCGTCGGCTGGGAT GGCAGCTTTCCCCTCATTGGCGGCAAGGCCGATTTCTGGACCATCATCACGGGCGGCATGTCCGCCTCGGCCAAG TCTGTAGGCAATGTAAGCCATCCACACGACTTATCAAAATTGAGGTTAAGCGCAATCTGGGCCTTCATGTCGTTC AACGTCGTCGCTTGGTCCATCATGCCAGCCATGGTCGTCGCCTTCGTCCTCCAAAGCACAGGCGTGGCCATAGCA GCCGAATTGCTAGCCAACATAGGTGTCGACGCCGTCGAAAGCGCCGGCATCTTGTTCGATGCCGCTTCCGAAGCG ACAGTAGACGCCGGCTCTGAACTCGGAGCAAGCATCGGGGGCGAATCGGGGTCGGGCGCTGCAGGGGCCGTGGCT GGAGAGGCTGGAGTAGCTGGAGAGGGCGGATCCTTGATATCATCCGAAATGTACAACGAAGTGGCCGAGCTGCCC GTCGAGCAGGCTGAAGCCGAGCGGCTCAAGGATCTGCTTCAAGAGCCGGAACTCCCGGCCGTTCCTATTGCCCCG GCTGCGTGA |