Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00123
Gene name
Locationscaffold_01:901127..902090
Strand+
Gene length (bp)963
Transcript length (bp)837
Coding sequence length (bp)837
Protein length (aa) 279

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03061 4HBT Thioesterase superfamily 1.0E-07 177 242

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 45 67 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00123
MLRRSDVWRRLASAEAPAWGFIWRPGRQQRRWHGTQQTSAAGGRTLKGLTMIAVGIASGALGAGAAWKTMTARGL
GFYSDEASLERFSPAETDAETRRLEETINKHPLALEMRQRPEMKESRPHMRMPAEYRARSMTGGTLSGPGKVPVP
ARTWIEAGGKSLVSILYVGDQLCGHPGLVHGGFLATMLDEGLAWCCFEALPHKIGVTARLAIDYCKPTPANSFLV
LKARTVRVEGRKAWVKGHIELLAGPGEEATVVAEAEALYVSPRYAALMPKVVR*
Coding >Ophcf2|00123
ATGCTGCGACGGTCGGATGTTTGGCGGCGCTTGGCGTCAGCAGAGGCGCCAGCGTGGGGATTTATTTGGCGGCCT
GGACGACAGCAGCGGCGATGGCATGGGACGCAGCAGACATCTGCTGCGGGTGGTAGAACCCTTAAAGGCCTAACG
ATGATCGCGGTAGGCATCGCGTCCGGCGCGCTGGGGGCGGGGGCGGCTTGGAAAACGATGACGGCGCGGGGCCTG
GGCTTCTACTCGGACGAGGCCAGTCTAGAGCGCTTCTCCCCTGCCGAAACGGACGCGGAGACGCGGCGGTTGGAG
GAGACAATCAACAAGCACCCGCTGGCGTTGGAGATGCGGCAAAGGCCCGAGATGAAGGAGTCTCGGCCTCACATG
CGGATGCCGGCCGAGTATCGGGCTCGGTCCATGACGGGCGGAACGCTATCGGGACCGGGAAAAGTGCCGGTACCA
GCGCGAACGTGGATCGAAGCGGGCGGCAAGTCGCTCGTGTCCATTCTCTACGTGGGCGACCAGCTATGCGGCCAC
CCGGGGCTGGTGCACGGGGGATTCCTGGCGACGATGCTTGATGAGGGTCTTGCGTGGTGTTGCTTCGAGGCGCTG
CCGCACAAGATTGGCGTTACGGCCAGGCTGGCTATCGATTATTGCAAGCCGACGCCTGCGAATAGCTTTTTGGTT
TTGAAGGCGAGGACAGTGCGGGTTGAGGGGCGAAAGGCTTGGGTTAAGGGGCATATTGAATTGCTGGCTGGGCCG
GGGGAGGAGGCGACGGTGGTGGCTGAGGCTGAGGCGCTGTATGTGTCGCCGCGTTATGCTGCTTTGATGCCAAAG
GTCGTTCGTTGA
Transcript >Ophcf2|00123
ATGCTGCGACGGTCGGATGTTTGGCGGCGCTTGGCGTCAGCAGAGGCGCCAGCGTGGGGATTTATTTGGCGGCCT
GGACGACAGCAGCGGCGATGGCATGGGACGCAGCAGACATCTGCTGCGGGTGGTAGAACCCTTAAAGGCCTAACG
ATGATCGCGGTAGGCATCGCGTCCGGCGCGCTGGGGGCGGGGGCGGCTTGGAAAACGATGACGGCGCGGGGCCTG
GGCTTCTACTCGGACGAGGCCAGTCTAGAGCGCTTCTCCCCTGCCGAAACGGACGCGGAGACGCGGCGGTTGGAG
GAGACAATCAACAAGCACCCGCTGGCGTTGGAGATGCGGCAAAGGCCCGAGATGAAGGAGTCTCGGCCTCACATG
CGGATGCCGGCCGAGTATCGGGCTCGGTCCATGACGGGCGGAACGCTATCGGGACCGGGAAAAGTGCCGGTACCA
GCGCGAACGTGGATCGAAGCGGGCGGCAAGTCGCTCGTGTCCATTCTCTACGTGGGCGACCAGCTATGCGGCCAC
CCGGGGCTGGTGCACGGGGGATTCCTGGCGACGATGCTTGATGAGGGTCTTGCGTGGTGTTGCTTCGAGGCGCTG
CCGCACAAGATTGGCGTTACGGCCAGGCTGGCTATCGATTATTGCAAGCCGACGCCTGCGAATAGCTTTTTGGTT
TTGAAGGCGAGGACAGTGCGGGTTGAGGGGCGAAAGGCTTGGGTTAAGGGGCATATTGAATTGCTGGCTGGGCCG
GGGGAGGAGGCGACGGTGGTGGCTGAGGCTGAGGCGCTGTATGTGTCGCCGCGTTATGCTGCTTTGATGCCAAAG
GTCGTTCGTTGA
Gene >Ophcf2|00123
ATGCTGCGACGGTCGGATGTTTGGCGGCGCTTGGCGTCAGCAGAGGCGCCAGCGTGGGGATTTATTTGGCGGCCT
GGACGACAGCAGCGGCGATGGCATGGGACGCAGCAGACATCTGCTGGTGAGCCGAGGAACTCGGATGATGACGGG
AGCAGACGGCTGATGCTTTGGCGGTGACAGCGGGTGGTAGAACCCTTAAAGGCCTAACGATGATCGCGGTAGGCA
TCGCGTCCGGCGCGCTGGGGGCGGGGGCGGCTTGGAAAACGATGACGGCGCGGGGCCTGGGCTTCTACTCGGACG
AGGCCAGTCTAGAGCGCTTCTCCCCTGCCGAAACGGACGCGGAGACGCGGCGGTTGGAGGAGACAATCAACAAGC
ACCCGCTGGCGTTGGAGATGCGGCAAAGGCCCGAGATGAAGGAGTCTCGGCCTCACATGCGGATGCCGGCCGAGT
ATCGGGCTCGGTCCATGACGGGCGGAACGCTATCGGGACCGGGAAAAGTGCCGGTACCAGCGCGAACGTGGATCG
AAGCGGGCGGCAAGTCGCTCGTGTCCATTCTCTACGTGGGCGACCAGCTATGCGGCCACCCGGGGCTGGTGCACG
GGGGATTCCTGGCGACGATGCTTGATGAGGGTCTTGCGTGGTGTTGCTTCGAGGCGCTGCCGCACAAGATTGGCG
TTACGGCCAGGCTGGCTATCGATTATTGCAAGCCGACGCCTGCGAATAGCTTTTTGGTTTTGAAGGCGAGGACAG
TGCGGGTTGAGGGGCGAAAGGCTTGGGTTAAGGGGCATATTGAATTGCTGGCTGGGCCGGGGGAGGAGGCGACGG
TGGTGGCTGAGGCTGAGGCGCTGTATGTGTCGCCGCGTTATGCTGCTGTGAGTTACCCGTTTGCGGGGATGGAAG
AGAGGGATGGAGGGAGAGAGGCTGACGTTGTGTGTTTAGTTGATGCCAAAGGTCGTTCGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail