Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00111
Gene name
Locationscaffold_01:868536..869656
Strand+
Gene length (bp)1120
Transcript length (bp)1002
Coding sequence length (bp)1002
Protein length (aa) 334

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01786 AOX Alternative oxidase 4.6E-91 65 298

GO

GO Term Description Terminal node
GO:0009916 alternative oxidase activity Yes
GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors No
GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor No
GO:0003824 catalytic activity No
GO:0003674 molecular_function No
GO:0016491 oxidoreductase activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 35 0.45

Transmembrane Domains

Domain # Start End Length
1 130 152 22
2 193 215 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00111
MISVAIQPRAIGSRHAVQLVRAGALTAISRRCFSTTPVTHLRDFFPVKDTPHILKTKPAWPHHGYTAEEMAAVIP
AHRKPRNFSDWAAWKIVRIARYWMDKATGMDKEQQVDKKNPTTAVVADKPLTEAQWLVRFVFLESIAGVPGMVAG
MLRHLNSLRRMRRDNGWIETLLEESYNERMHLLTFMKMCEPGWFMKLMIIAAQGVFFNGLFVAYLLHPKVVHRFV
GYLEEEAVHTYTRAIHEIDQGHLPKWSDPKFQIPDIAIGYWNMPQGHRTMRDLILYIRADEAGHRGVNHTLGNLN
QKEDPNPFVSTFKDRDAPRPSLKPAGYERAEVI*
Coding >Ophcf2|00111
ATGATATCTGTTGCTATACAGCCTCGGGCTATCGGTTCGCGGCACGCCGTCCAGCTCGTTCGAGCAGGAGCCCTG
ACAGCCATCTCCCGCCGCTGTTTTTCGACCACCCCAGTGACGCACCTCCGCGACTTCTTCCCCGTCAAAGACACG
CCTCACATTCTCAAGACCAAGCCTGCCTGGCCTCACCATGGTTATACCGCCGAGGAGATGGCGGCCGTGATCCCG
GCTCACCGCAAGCCACGCAATTTCAGCGACTGGGCTGCTTGGAAGATAGTCCGCATCGCGCGGTACTGGATGGAC
AAGGCCACCGGTATGGACAAGGAGCAGCAGGTGGATAAGAAGAACCCCACGACAGCCGTCGTGGCGGACAAGCCA
CTGACCGAGGCCCAATGGCTAGTCCGCTTCGTCTTCTTGGAGAGCATTGCCGGTGTGCCAGGAATGGTAGCCGGG
ATGCTTCGCCACCTCAACAGCCTGCGACGCATGCGGCGGGACAACGGCTGGATCGAGACGCTCCTCGAGGAGAGC
TACAACGAGCGGATGCACCTCCTGACCTTCATGAAGATGTGTGAGCCGGGATGGTTCATGAAGCTCATGATCATC
GCTGCCCAAGGCGTCTTCTTTAACGGACTCTTCGTCGCTTACCTGCTTCATCCCAAAGTCGTCCACCGCTTCGTC
GGCTATCTGGAGGAAGAGGCCGTGCACACGTACACTCGAGCCATCCACGAGATTGATCAGGGCCATCTGCCCAAA
TGGTCCGACCCCAAGTTCCAAATTCCGGATATTGCTATTGGGTACTGGAACATGCCCCAAGGTCACCGCACCATG
AGAGACCTCATCCTTTATATCCGAGCCGACGAGGCTGGTCACCGTGGTGTCAACCACACGCTTGGAAATCTCAAC
CAGAAGGAAGATCCGAACCCGTTCGTCAGCACGTTCAAGGACCGCGATGCACCTAGACCGAGCCTCAAGCCCGCG
GGTTACGAGCGAGCCGAGGTCATCTGA
Transcript >Ophcf2|00111
ATGATATCTGTTGCTATACAGCCTCGGGCTATCGGTTCGCGGCACGCCGTCCAGCTCGTTCGAGCAGGAGCCCTG
ACAGCCATCTCCCGCCGCTGTTTTTCGACCACCCCAGTGACGCACCTCCGCGACTTCTTCCCCGTCAAAGACACG
CCTCACATTCTCAAGACCAAGCCTGCCTGGCCTCACCATGGTTATACCGCCGAGGAGATGGCGGCCGTGATCCCG
GCTCACCGCAAGCCACGCAATTTCAGCGACTGGGCTGCTTGGAAGATAGTCCGCATCGCGCGGTACTGGATGGAC
AAGGCCACCGGTATGGACAAGGAGCAGCAGGTGGATAAGAAGAACCCCACGACAGCCGTCGTGGCGGACAAGCCA
CTGACCGAGGCCCAATGGCTAGTCCGCTTCGTCTTCTTGGAGAGCATTGCCGGTGTGCCAGGAATGGTAGCCGGG
ATGCTTCGCCACCTCAACAGCCTGCGACGCATGCGGCGGGACAACGGCTGGATCGAGACGCTCCTCGAGGAGAGC
TACAACGAGCGGATGCACCTCCTGACCTTCATGAAGATGTGTGAGCCGGGATGGTTCATGAAGCTCATGATCATC
GCTGCCCAAGGCGTCTTCTTTAACGGACTCTTCGTCGCTTACCTGCTTCATCCCAAAGTCGTCCACCGCTTCGTC
GGCTATCTGGAGGAAGAGGCCGTGCACACGTACACTCGAGCCATCCACGAGATTGATCAGGGCCATCTGCCCAAA
TGGTCCGACCCCAAGTTCCAAATTCCGGATATTGCTATTGGGTACTGGAACATGCCCCAAGGTCACCGCACCATG
AGAGACCTCATCCTTTATATCCGAGCCGACGAGGCTGGTCACCGTGGTGTCAACCACACGCTTGGAAATCTCAAC
CAGAAGGAAGATCCGAACCCGTTCGTCAGCACGTTCAAGGACCGCGATGCACCTAGACCGAGCCTCAAGCCCGCG
GGTTACGAGCGAGCCGAGGTCATCTGA
Gene >Ophcf2|00111
ATGATATCTGTTGCTATACAGCCTCGGGCTATCGGTTCGCGGCACGCCGTCCAGCTCGTTCGAGCAGGAGCCCTG
ACAGCCATCTCCCGCCGCTGTTTTTCGACCACCCCAGTGACGCACCTCCGCGACTTCTTCCCCGTCAAAGACACG
CCTCACATTCTCAAGACCAAGCCTGCCTGGCCTCACCATGGTTATACCGCCGAGGAGATGGCGGCCGTGATCCCG
GCTCACCGCAAGCCACGCAATTTCAGCGACTGGGCTGCTTGGAAGATAGTCCGCATCGCGCGGTACTGGATGGAC
AAGGCCACCGGTATGGACAAGGAGCAGCAGGTGGATAAGAAGAACCCCACGACAGCCGTCGTGGCGGACAAGCCA
CTGACCGAGGCCCAATGGGTGAGTTGCCCCCCGTCCTCGTTTTCCTTTCTAGACGTGGCTAACGACTGAATAGCT
AGTCCGCTTCGTCTTCTTGGAGAGCATTGCCGGTGTGCCAGGAATGGTAGCCGGGATGCTTCGCCACCTCAACAG
CCTGCGACGCATGCGGCGGGACAACGGCTGGATCGAGACGCTCCTCGAGGAGAGCTACAACGAGCGGATGCACCT
CCTGACCTTCATGAAGATGTGTGAGCCGGGATGGTTCATGAAGCTCATGATCATCGCTGCCCAAGGCGTCTTCTT
TAACGGACTCTTCGTCGCTTACCTGCTTCATCCCAAAGTCGTCCACCGCTTCGTCGGCTATCTGGAGGAAGAGGC
CGTGCACACGTACACTCGAGCCATCCACGAGATTGATCAGGGCCATCTGCCCAAATGGTCCGACCCCAAGTTCCA
AATTCCGGATATTGCTATTGGGGTAAGCATCGACACCCAGCCACTTTCAGTGCGAGGCTTCAGCTGACGTGAACC
GCCTTGATAGTACTGGAACATGCCCCAAGGTCACCGCACCATGAGAGACCTCATCCTTTATATCCGAGCCGACGA
GGCTGGTCACCGTGGTGTCAACCACACGCTTGGAAATCTCAACCAGAAGGAAGATCCGAACCCGTTCGTCAGCAC
GTTCAAGGACCGCGATGCACCTAGACCGAGCCTCAAGCCCGCGGGTTACGAGCGAGCCGAGGTCATCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail