Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00097
Gene name
Locationscaffold_01:839581..840211
Strand-
Gene length (bp)630
Transcript length (bp)570
Coding sequence length (bp)570
Protein length (aa) 190

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 44 0.45

Transmembrane Domains

Domain # Start End Length
1 92 109 17
2 116 138 22
3 142 164 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00097
MDFAPYQSSPPEHARVASPESLTSPRPSQDATRRSPPLLQHPQPQRAWAGALDGHATAVQGGGGSWANEAQPGPD
PVSEFDTSLGIRLDYEASLAYVALPPLGAIVLLVLERNSDYVRFHAWQAALLFTAILVLHIVISPSSFLSWLLFF
ADVGLMAFLALKAYRDAENLDRFEVPFFGPVSGRILDDE*
Coding >Ophcf2|00097
ATGGACTTTGCTCCTTATCAATCTTCGCCTCCAGAACACGCGCGCGTCGCGTCACCTGAGTCCCTCACGTCACCT
CGCCCATCCCAAGACGCCACCCGCAGAAGCCCCCCCTTGCTGCAGCACCCGCAGCCCCAGCGCGCCTGGGCCGGA
GCTCTAGACGGTCATGCCACCGCTGTTCAAGGCGGTGGAGGCTCGTGGGCCAACGAAGCGCAGCCGGGACCAGAT
CCTGTGAGCGAGTTCGACACGAGCCTCGGCATACGGCTCGATTACGAGGCCTCTCTAGCTTACGTCGCGCTTCCG
CCGCTGGGAGCCATTGTTCTTTTAGTTCTCGAGCGCAATAGCGACTACGTGCGCTTCCACGCCTGGCAGGCCGCC
CTGCTCTTCACCGCCATCCTCGTTCTGCACATCGTCATCTCGCCATCTTCCTTTCTCAGCTGGCTCCTCTTCTTC
GCTGACGTTGGTCTCATGGCGTTCCTCGCCCTCAAGGCATATAGGGACGCTGAGAATCTCGATCGGTTCGAGGTT
CCCTTCTTCGGCCCCGTCTCCGGCCGCATCCTAGATGATGAGTAG
Transcript >Ophcf2|00097
ATGGACTTTGCTCCTTATCAATCTTCGCCTCCAGAACACGCGCGCGTCGCGTCACCTGAGTCCCTCACGTCACCT
CGCCCATCCCAAGACGCCACCCGCAGAAGCCCCCCCTTGCTGCAGCACCCGCAGCCCCAGCGCGCCTGGGCCGGA
GCTCTAGACGGTCATGCCACCGCTGTTCAAGGCGGTGGAGGCTCGTGGGCCAACGAAGCGCAGCCGGGACCAGAT
CCTGTGAGCGAGTTCGACACGAGCCTCGGCATACGGCTCGATTACGAGGCCTCTCTAGCTTACGTCGCGCTTCCG
CCGCTGGGAGCCATTGTTCTTTTAGTTCTCGAGCGCAATAGCGACTACGTGCGCTTCCACGCCTGGCAGGCCGCC
CTGCTCTTCACCGCCATCCTCGTTCTGCACATCGTCATCTCGCCATCTTCCTTTCTCAGCTGGCTCCTCTTCTTC
GCTGACGTTGGTCTCATGGCGTTCCTCGCCCTCAAGGCATATAGGGACGCTGAGAATCTCGATCGGTTCGAGGTT
CCCTTCTTCGGCCCCGTCTCCGGCCGCATCCTAGATGATGAGTAG
Gene >Ophcf2|00097
ATGGACTTTGCTCCTTATCAATCTTCGCCTCCAGAACACGCGCGCGTCGCGTCACCTGAGTCCCTCACGTCACCT
CGCCCATCCCAAGACGCCACCCGCAGAAGCCCCCCCTTGCTGCAGCACCCGCAGCCCCAGCGCGCCTGGGCCGGA
GCTCTAGACGGTCATGCCACCGCTGTTCAAGGCGGTGGAGGCTCGTGGGCCAACGAAGCGCAGCCGGGACCAGAT
CCTGTGAGCGAGTTCGACACGAGCCTCGGCATACGGCTCGATTACGAGGCCTCTCTAGCTTACGTCGCGCTTCCG
CCGCTGGGAGCCATTGTTCTTTTAGTTCTCGAGCGCAATAGCGACTACGTGCGCTTCCACGCCTGGCAGGCCGCC
CTGCTCTTCACCGCCATCCTCGTTCTGCACATCGTCATCTCGCCATCTTCCTTTCTCAGCTGGCTCCTCTTCTTC
GCTGACGTTGGTCTCATGGCGTTCCTCGCCCTCAAGGCATATAGGGACGCTGAGAATCTCGATCGGTGAGCGCGC
TCTGATCTCCTCTTGCATATGATGATCCCAAGCTTACGTGACTATATCAGGTTCGAGGTTCCCTTCTTCGGCCCC
GTCTCCGGCCGCATCCTAGATGATGAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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