Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00078
Gene name
Locationscaffold_01:202636..204427
Strand-
Gene length (bp)1791
Transcript length (bp)1377
Coding sequence length (bp)1377
Protein length (aa) 459

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00587 tRNA-synt_2b tRNA synthetase class II core domain (G, H, P, S and T) 7.0E-37 224 410
PF02403 Seryl_tRNA_N Seryl-tRNA synthetase N-terminal domain 1.6E-16 1 112

GO

GO Term Description Terminal node
GO:0005524 ATP binding Yes
GO:0004812 aminoacyl-tRNA ligase activity Yes
GO:0006418 tRNA aminoacylation for protein translation Yes
GO:0000166 nucleotide binding Yes
GO:1901564 organonitrogen compound metabolic process No
GO:0003824 catalytic activity No
GO:0006520 cellular amino acid metabolic process No
GO:0043170 macromolecule metabolic process No
GO:1901265 nucleoside phosphate binding No
GO:0005488 binding No
GO:0032559 adenyl ribonucleotide binding No
GO:0034660 ncRNA metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0016875 ligase activity, forming carbon-oxygen bonds No
GO:0140098 catalytic activity, acting on RNA No
GO:0046483 heterocycle metabolic process No
GO:0008152 metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:1901363 heterocyclic compound binding No
GO:0043168 anion binding No
GO:0140101 catalytic activity, acting on a tRNA No
GO:0019752 carboxylic acid metabolic process No
GO:0009987 cellular process No
GO:0043436 oxoacid metabolic process No
GO:0006399 tRNA metabolic process No
GO:0044237 cellular metabolic process No
GO:0097159 organic cyclic compound binding No
GO:0043038 amino acid activation No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0097367 carbohydrate derivative binding No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0030554 adenyl nucleotide binding No
GO:0140640 catalytic activity, acting on a nucleic acid No
GO:0008150 biological_process No
GO:0043167 ion binding No
GO:0006082 organic acid metabolic process No
GO:0036094 small molecule binding No
GO:0043039 tRNA aminoacylation No
GO:0032555 purine ribonucleotide binding No
GO:0044281 small molecule metabolic process No
GO:0090304 nucleic acid metabolic process No
GO:0017076 purine nucleotide binding No
GO:0032553 ribonucleotide binding No
GO:0003674 molecular_function No
GO:0016070 RNA metabolic process No
GO:0016874 ligase activity No
GO:0006807 nitrogen compound metabolic process No
GO:0044238 primary metabolic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0071704 organic substance metabolic process No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.6288 0.4218 0.0888 0.0355 0.4167 0.1693 0.2681 0.0294 0.07 0.0066

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup3025
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|7586
Ophiocordyceps australis map64 (Brazil) OphauB2|3729
Ophiocordyceps camponoti-floridani Ophcf2|00078 (this protein)
Ophiocordyceps camponoti-rufipedis Ophun1|641
Ophiocordyceps kimflemingae Ophio5|944
Ophiocordyceps subramaniannii Hirsu2|5221

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00078
MLDVIDFIADRGGDPEQIRDSQRRRHAKVETVDEVIALFEDHRKTNYSATQISSKINEAQKQIGTGKKAKENVDD
LVAQKQDLEKEKRLLVESAAKKDALLKSKLRTIGNIVHHSVPVSDNEDNNAVLRKWAPEGFTVEKRDVLSHHEVL
LRLDGYDPDRGVKIVGHRGYFLRQWGVFLNQALINYGLEFLSQRYYTPLQTPQFMHKDYMSKTAQLEAFDEELYK
VVDGEDKNDKYLIATSEQPISAFHANEWLIAKDLPIKYAGYSTCYRREAGSHGRDAWGIYRVHQFEKIEQFLLTD
PSKSWEAFDDMMAVSEEFYKSLGLPYQVVAIVSGALNNAAAKKLDLEAWFPYQGEYKELVSCSNCTDYQSRALEI
RFGAKSQTDTKKKYVHCLNATLCATSRTLCCILEIYQTEEGLKVPEPLRKYLPGSPDFIPFTRELPKESTSQKLA
SRTAKGIK*
Coding >Ophcf2|00078
ATGCTCGACGTTATCGACTTCATTGCAGATCGCGGCGGCGATCCAGAACAAATTCGAGACTCTCAACGGCGCAGA
CATGCAAAAGTAGAGACCGTTGACGAAGTTATAGCTCTCTTTGAGGACCATCGAAAGACAAACTACAGCGCGACA
CAAATCAGCAGCAAGATCAACGAGGCCCAGAAACAAATAGGAACCGGCAAGAAGGCCAAGGAGAACGTCGATGAC
TTAGTGGCCCAAAAACAAGACCTTGAGAAGGAAAAGAGGCTCCTCGTAGAGTCCGCCGCGAAGAAGGATGCCCTT
CTCAAGTCCAAGCTTCGAACCATTGGCAATATTGTTCACCACTCAGTACCAGTCAGCGATAATGAGGACAACAAC
GCTGTGCTTCGGAAGTGGGCCCCGGAAGGTTTCACGGTCGAGAAGCGCGACGTCCTGTCTCACCATGAAGTACTC
CTTCGTCTAGATGGGTATGACCCTGACCGCGGTGTCAAAATTGTCGGTCATCGGGGCTACTTCCTGCGTCAATGG
GGTGTCTTCCTCAACCAAGCGTTGATCAATTACGGTCTGGAATTTTTGAGTCAGCGCTACTATACTCCCCTGCAG
ACACCGCAGTTCATGCACAAGGACTATATGAGCAAGACTGCTCAGCTGGAGGCTTTCGACGAGGAGCTGTATAAG
GTCGTCGACGGCGAGGACAAGAACGACAAGTACCTCATTGCTACCTCGGAGCAGCCCATCTCGGCCTTTCACGCA
AACGAATGGCTTATCGCGAAGGATCTCCCCATCAAATATGCAGGATATAGCACCTGCTATCGGCGTGAGGCAGGG
TCACATGGGCGAGATGCCTGGGGAATTTATCGCGTTCATCAATTCGAAAAGATCGAGCAATTTCTCCTGACGGAC
CCTTCAAAGTCATGGGAAGCTTTCGACGATATGATGGCCGTTTCCGAGGAGTTCTACAAGTCACTTGGACTGCCC
TATCAGGTTGTGGCCATCGTCTCCGGCGCATTGAACAACGCAGCCGCTAAGAAATTGGATTTGGAAGCCTGGTTT
CCTTACCAAGGCGAGTACAAGGAGCTGGTTTCATGTTCGAATTGCACCGACTACCAGTCACGAGCCTTGGAGATT
CGATTCGGCGCAAAGTCGCAGACGGATACCAAGAAAAAGTATGTTCATTGCCTGAATGCCACGTTGTGCGCCACG
TCACGGACGCTATGTTGCATTCTCGAGATTTATCAGACCGAAGAGGGACTCAAGGTGCCTGAACCGCTCCGAAAA
TATCTCCCCGGATCGCCCGACTTCATACCGTTCACAAGGGAGCTTCCAAAGGAGTCGACATCCCAGAAGTTGGCG
TCGCGAACAGCGAAGGGAATCAAATAG
Transcript >Ophcf2|00078
ATGCTCGACGTTATCGACTTCATTGCAGATCGCGGCGGCGATCCAGAACAAATTCGAGACTCTCAACGGCGCAGA
CATGCAAAAGTAGAGACCGTTGACGAAGTTATAGCTCTCTTTGAGGACCATCGAAAGACAAACTACAGCGCGACA
CAAATCAGCAGCAAGATCAACGAGGCCCAGAAACAAATAGGAACCGGCAAGAAGGCCAAGGAGAACGTCGATGAC
TTAGTGGCCCAAAAACAAGACCTTGAGAAGGAAAAGAGGCTCCTCGTAGAGTCCGCCGCGAAGAAGGATGCCCTT
CTCAAGTCCAAGCTTCGAACCATTGGCAATATTGTTCACCACTCAGTACCAGTCAGCGATAATGAGGACAACAAC
GCTGTGCTTCGGAAGTGGGCCCCGGAAGGTTTCACGGTCGAGAAGCGCGACGTCCTGTCTCACCATGAAGTACTC
CTTCGTCTAGATGGGTATGACCCTGACCGCGGTGTCAAAATTGTCGGTCATCGGGGCTACTTCCTGCGTCAATGG
GGTGTCTTCCTCAACCAAGCGTTGATCAATTACGGTCTGGAATTTTTGAGTCAGCGCTACTATACTCCCCTGCAG
ACACCGCAGTTCATGCACAAGGACTATATGAGCAAGACTGCTCAGCTGGAGGCTTTCGACGAGGAGCTGTATAAG
GTCGTCGACGGCGAGGACAAGAACGACAAGTACCTCATTGCTACCTCGGAGCAGCCCATCTCGGCCTTTCACGCA
AACGAATGGCTTATCGCGAAGGATCTCCCCATCAAATATGCAGGATATAGCACCTGCTATCGGCGTGAGGCAGGG
TCACATGGGCGAGATGCCTGGGGAATTTATCGCGTTCATCAATTCGAAAAGATCGAGCAATTTCTCCTGACGGAC
CCTTCAAAGTCATGGGAAGCTTTCGACGATATGATGGCCGTTTCCGAGGAGTTCTACAAGTCACTTGGACTGCCC
TATCAGGTTGTGGCCATCGTCTCCGGCGCATTGAACAACGCAGCCGCTAAGAAATTGGATTTGGAAGCCTGGTTT
CCTTACCAAGGCGAGTACAAGGAGCTGGTTTCATGTTCGAATTGCACCGACTACCAGTCACGAGCCTTGGAGATT
CGATTCGGCGCAAAGTCGCAGACGGATACCAAGAAAAAGTATGTTCATTGCCTGAATGCCACGTTGTGCGCCACG
TCACGGACGCTATGTTGCATTCTCGAGATTTATCAGACCGAAGAGGGACTCAAGGTGCCTGAACCGCTCCGAAAA
TATCTCCCCGGATCGCCCGACTTCATACCGTTCACAAGGGAGCTTCCAAAGGAGTCGACATCCCAGAAGTTGGCG
TCGCGAACAGCGAAGGGAATCAAATAG
Gene >Ophcf2|00078
ATGCTCGACGTTATCGACTTCATTGCAGATCGCGGCGGCGATCCAGAACAAATTCGAGACTCTCAACGGCGCAGA
CATGCAAAAGTAGAGACCGTTGACGAAGTTATAGCTCTCTTTGAGGACCATCGAAAGAGTAAATAAATCTGTCCC
TTTCTAGCGGGTTTCTTTCCTTTCTTTCGCACTGTAGCTGGCTTCTTTGTTAATACAGCTTCTGATAGCAAACTA
CAGCGCGACACAAATCAGCAGCAAGATCAACGAGGCCCAGAAACAAATAGGAACCGGCAAGAAGGTTAACAGCTT
CACTATCTCCTTACCATGAGGTCCGATCATCTGACACGAGCTAGGCCAAGGAGAACGTCGATGACTTAGTGGCCC
AAAAACAAGACCTTGAGAAGGAAAAGAGGCTCCTCGTAGAGTCCGCCGCGAAGAAGGATGCCCTTCTCAAGTCCA
AGCTTCGAACCATTGGCAATATTGTTCACCACTCAGTACCAGTCAGCGATAATGAGGTATTTAGACGACGTCTCG
GCCGTTTATGATAAGGCCTAGTCCGCGTCTTGAACCTAATAGTGCTATTGCAGGACAACAACGCTGTGCTTCGGA
AGTGGGCCCCGGAAGGTTTCACGGTCGAGAAGCGCGACGTCCTGTCTCACCATGAAGTACTCCTTCGTCTAGATG
GGTATGACCCTGACCGCGGTGTCAAAATTGTCGGTCATCGGGGCTACTTCCTGCGTCAATGGGGTGTCTTCCTCA
ACCAAGCGTTGATCAATTACGGTCTGGAATTTTTGAGTCAGCGCTACTATACTCCCCTGCAGACACCGCAGTTCA
TGCACAAGGACTATATGAGCAAGACTGCTCAGCTGGAGGCTTTCGACGAGGAGCTGTATAAGGTCGTCGACGGCG
AGGACAAGAACGACAAGTACCTCATTGCTACCTCGGAGCAGCCCATCTCGGCCTTTCACGCAAACGAATGGCTTA
TCGCGAAGGATCTCCCCATCAAGTCAGTACAATCCAAGACTCCAGCAAGACCCCTTGGCTAACTCGACTATGCGG
TCTCAGATATGCAGGATATAGCACCTGCTATCGGCGTGAGGCAGGGTCACATGGGCGAGATGCCTGGGGAATTTA
TCGCGTTCATCAATTCGAAAAGGTACAGCCATATTCATCTGCTCCGGCTCTTCGCGGGACCCTGGCTAGCTGGAA
GTTCAAAATTATGCCTTATCTTTGCTAACCTCTCTCTAGATCGAGCAATTTCTCCTGACGGACCCTTCAAAGTCA
TGGGAAGCTTTCGACGATATGATGGCCGTTTCCGAGGAGTTCTACAAGTCACTTGGACTGCCCTATCAGGTTGTG
GCCATCGTCTCCGGCGCATTGAACAACGCAGCCGCTAAGAAATTGGATTTGGAAGCCTGGTTTCCTTACCAAGGC
GAGTACAAGGAGCTGGTTTCATGTTCGAATTGCACCGACTACCAGTCACGAGCCTTGGAGATTCGATTCGGCGCA
AAGTCGCAGACGGATACCAAGAAAAAGTATGTTCATTGCCTGAATGCCACGTTGTGCGCCACGTCACGGACGCTA
TGTTGCATTCTCGAGATTTATCAGACCGAAGAGGTGAGAGGTGTTAACCCGAGGTTTTGTGAAAATGTCATAACC
TGGTTGTAGGGACTCAAGGTGCCTGAACCGCTCCGAAAATATCTCCCCGGATCGCCCGACTTCATACCGTTCACA
AGGGAGCTTCCAAAGGAGTCGACATCCCAGAAGTTGGCGTCGCGAACAGCGAAGGGAATCAAATAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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