Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophcf2\|00068
Gene name
Location	scaffold_01:174345..176160
Strand	-
Gene length (bp)	1815
Transcript length (bp)	1002
Coding sequence length (bp)	1002
Protein length (aa)	334

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 70	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	25	47	22
2	57	76	19
3	140	162	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
Fungus	Fungus in pure culture	5.98	1.64	10.31
Alive	In ants, during behavior modification	10.86	3.56	18.17
Dead	In ants, recently dead	7.00	1.95	12.05

Differential expression

Label1	Label2	Q-value	Significant difference
Alive	Fungus	0.050101	no
Alive	Dead	0.099022	no
Dead	Fungus	0.673809	no

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophcf2\|00068 MNATADASFGPRLSDRFDTLKFEQAVFSIGPSAVLSFASPLGIAILARRQPTFRADALLWSKMTFFFYLAFGWLN WRCGLYPHRLYALESRWLFPDVVAMGSLLYAEHRYSHSPSTMISLYLSVTILLETASIRSLFLRGGLFAFAIVSV AALAVKLLLLALEEIPKLELSAPATGYTAFLGVDDLPSLDHKLDSHRLVSSLKQEWKSVEKPVEHSLAYATFACL QGHRLGWVRTLEKCVWTTPGAWLGALLPLRLEVYLGIAVSKCHYMHHTFRLITSLRGGLVALIFAKASLRVKHSN SPSDLGQLSSLLCLESNLADQLTPILVITPVVF*
Coding	>Ophcf2\|00068 ATGAACGCCACTGCAGACGCCTCCTTCGGCCCACGGCTGTCGGACCGCTTCGACACCCTGAAATTCGAGCAAGCC GTCTTCTCTATCGGTCCATCTGCTGTCCTGTCATTTGCCTCACCGCTCGGCATTGCGATCCTAGCCCGAAGACAG CCGACTTTCCGGGCCGATGCCCTGCTCTGGTCCAAGATGACATTCTTCTTCTATTTGGCCTTCGGCTGGCTGAAC TGGCGTTGTGGATTGTATCCTCACCGGCTATACGCACTCGAATCACGTTGGCTGTTTCCCGATGTCGTGGCCATG GGATCGCTGCTTTATGCTGAGCATCGTTACTCTCACTCGCCCTCCACAATGATTAGCCTGTACTTATCCGTCACG ATTCTGCTTGAAACTGCAAGCATTCGCTCCCTCTTTCTTCGCGGCGGTCTGTTTGCCTTTGCCATCGTCAGCGTT GCTGCTCTTGCTGTCAAGCTCCTGCTTCTCGCACTCGAAGAGATCCCTAAGCTGGAGCTCTCTGCACCCGCAACG GGCTATACTGCCTTTCTTGGAGTCGATGACTTGCCCAGCCTCGATCATAAGCTTGACTCTCACCGGCTTGTCTCT AGCTTGAAGCAGGAATGGAAATCGGTTGAGAAACCTGTCGAGCACTCTCTGGCTTATGCCACTTTTGCCTGCCTT CAAGGCCACCGTCTGGGCTGGGTCCGGACTCTGGAGAAATGCGTCTGGACGACTCCCGGGGCGTGGTTGGGGGCC TTGTTGCCGCTACGGCTTGAGGTATATCTTGGGATAGCGGTCTCGAAATGTCACTACATGCATCACACATTCCGT CTCATCACCTCCTTACGAGGCGGTCTTGTGGCGCTCATCTTTGCCAAAGCCTCCCTGCGTGTTAAGCATAGCAAC AGCCCGAGTGACTTAGGGCAGCTCTCGTCTCTTCTCTGTCTTGAATCCAATCTCGCCGATCAGTTGACTCCCATC CTCGTCATTACCCCGGTCGTCTTCTGA
Transcript	>Ophcf2\|00068 ATGAACGCCACTGCAGACGCCTCCTTCGGCCCACGGCTGTCGGACCGCTTCGACACCCTGAAATTCGAGCAAGCC GTCTTCTCTATCGGTCCATCTGCTGTCCTGTCATTTGCCTCACCGCTCGGCATTGCGATCCTAGCCCGAAGACAG CCGACTTTCCGGGCCGATGCCCTGCTCTGGTCCAAGATGACATTCTTCTTCTATTTGGCCTTCGGCTGGCTGAAC TGGCGTTGTGGATTGTATCCTCACCGGCTATACGCACTCGAATCACGTTGGCTGTTTCCCGATGTCGTGGCCATG GGATCGCTGCTTTATGCTGAGCATCGTTACTCTCACTCGCCCTCCACAATGATTAGCCTGTACTTATCCGTCACG ATTCTGCTTGAAACTGCAAGCATTCGCTCCCTCTTTCTTCGCGGCGGTCTGTTTGCCTTTGCCATCGTCAGCGTT GCTGCTCTTGCTGTCAAGCTCCTGCTTCTCGCACTCGAAGAGATCCCTAAGCTGGAGCTCTCTGCACCCGCAACG GGCTATACTGCCTTTCTTGGAGTCGATGACTTGCCCAGCCTCGATCATAAGCTTGACTCTCACCGGCTTGTCTCT AGCTTGAAGCAGGAATGGAAATCGGTTGAGAAACCTGTCGAGCACTCTCTGGCTTATGCCACTTTTGCCTGCCTT CAAGGCCACCGTCTGGGCTGGGTCCGGACTCTGGAGAAATGCGTCTGGACGACTCCCGGGGCGTGGTTGGGGGCC TTGTTGCCGCTACGGCTTGAGGTATATCTTGGGATAGCGGTCTCGAAATGTCACTACATGCATCACACATTCCGT CTCATCACCTCCTTACGAGGCGGTCTTGTGGCGCTCATCTTTGCCAAAGCCTCCCTGCGTGTTAAGCATAGCAAC AGCCCGAGTGACTTAGGGCAGCTCTCGTCTCTTCTCTGTCTTGAATCCAATCTCGCCGATCAGTTGACTCCCATC CTCGTCATTACCCCGGTCGTCTTCTGA
Gene	>Ophcf2\|00068 ATGAACGCCACTGCAGACGCCTCCTTCGGCCCACGGCTGTCGGACCGCTTCGACACCCTGAAATTCGAGCAAGCC GTCTTCTCTATCGGTCCATCTGCTGTCCTGTCATTTGCCTCACCGCTCGGCATTGCGATCCTAGCCCGAAGACAG CCGACTTTCCGGGCCGATGCCCTGCTCTGGTCCAAGATGGTGAGCGGCTTCGTCTGCTGCTTCTCGACGTTGTGC TGACCCTGGACAGACATTCTTCTTCTATTTGGCCTTCGGCTGGCTGAACTGGCGTTGTGGATTGTATCCTCACCG GCTATACGCACTCGAATCACGTTGGCTGTTTCCCGATGTCGTGGCCATGGGATCGCTGCTTTATGCTGAGCATCG TTACTCTCACTCGCCCTCCACAATGATTAGCCTGTACTTATCCGTCACGATTCTGCTTGAAACTGCAAGCATTCG CTCCCTCTTTCTTCGCGGCGGTCTGTTTGCCTTTGCCATCGTCAGCGTTGCTGCTCTTGCTGTCAAGCTCCTGCT TCTCGCACTCGAAGAGATCCCTAAGCTGGAGCTCTCTGCACCCGCAACGTTCAGAGAGACTTCGAGCGTGATTTG GAATCGCTCCGTCTTCTAGTGGCTGAAATCGACCCTCTTCAGGGGCTATACTGCCTTTCTTGGAGTCGATGACTT GCCCAGCCTCGATCATAAGCTTGACTCTCACCGGCTTGTCTCTAGCTTGAAGCAGGAATGGAAATCGGGTAGGTT GGCAGCAGCGTGCTTATCAGTCTTCATCGTCAATCGTGCTGATTCTTAAGCCAGTTGAGAAACCTGTCGAGCACT CTCTGGCTTATGCCACTTTTGCCTGCCTTCAAGGCCACCGTCTGGGCTGGGGTAATTCCTAGGCTCTGCTTCACA GGCTTCACCTTTGCTCAGCCCTTTCTGCTTAATACAGTCGTCCAATTCCTCGGGAGCACGAGTCCGGACTCTGGA GAAATGCGTCTGGACGACTCCCGGGGCGTGGTTGGGGGCCTTGTTGCCGCTACGGCTTGAGGTATATCTTGGGAT AGCGGTATGTCAAGTGTTGAGCGGACATCATCGTCCTCACCCGCTTATCCGTAGCATCCGCAGGTCTCGAAATGT CACTACATGCATCACACATTCCGTCTCATCACCTCCTTACGAGGCGGTCTTGTGGCGCTCATCTTTGCCAAAGCC GTGGGCCTAGAGGCGACTACGGCTATGGACACTGCTGCTTTGACCCTAATGAGCACCGACTTGAACGGAATCTCT AGCGGACTTTAGGATGTTCACGATTTGTGGGCGAGCTTCATCGAGCTAGGTCTCGGTGTCTTCCTGCTTCAACGA CAAGTCGGAGCGGCCTGCTTCCTGTTACTAGTCCCTGCGGTTCGTAAGTCCTAACTTGCCTCTCCCGGCATCGCG GCTCTAGGCTTTCTTTACCCCTGACGACGGTAACGGTGTGTAGTGTTAAGCATAGCAACAGCCCGAGTGACTTAG GGCGTAAGTCCCGCTAAAGCGTTGTGGAATTCCAATGTATAGAAGCGAGTCTCAACAACCTCGTCGGCTCTCGGC CAAATCAAGGGCATTAAGATGATGGGCATCGAAGACCGCATCTCCCGCCCTATCTAGTCTCTCTGTGTTTACAAA CTTAATTCGTCTAAGAGCTCTCGTCTCTTCTCTGTCTTGAATGTGAGATAGGTGCTTGTTGTTGCCTCGACTAAC GGACTCTTGGTCCGGGTTGCTAACGTCCCCACAGCCAATCTCGCCGATCAGTTGACTCCCATCCTCGTCATTACC CCGGTCGTCTTCTGA

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