Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00058
Gene name
Locationscaffold_01:149385..150298
Strand+
Gene length (bp)913
Transcript length (bp)855
Coding sequence length (bp)855
Protein length (aa) 285

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PFAM Domains

(None)

GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

Domain # Start End Length
1 191 213 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00058
MTLFRSIILVIALSPFIHGMDLSTVVDGTIPSMPMTKSAMPCSAPVLPTDFERCLIPGGVDFWTQGGFYSPGVCF
TGYRPLCTQTAGTETAVRCVPRAYKCNADGKDQRFAVSDFDGTLLSAPAFEIRWRGVDLKVGADTSSRASDRGLP
SETVTLSESASTASSTAAATHSSSPAVESAVASTSSVGAGLVAAIAIGTVAVVLIVGLLGGLLARRRRRKSHQSV
TRLKPATQPQANEMEDMPIGPRELPPHNPLGHSSAAQQPTAHVSAVFEMAAEQATDATQ*
Coding >Ophcf2|00058
ATGACCCTCTTTCGGTCCATTATTCTCGTTATAGCGCTCTCTCCTTTCATCCACGGGATGGATCTGAGCACCGTC
GTCGACGGAACCATTCCGTCAATGCCCATGACCAAGTCTGCGATGCCCTGCTCAGCCCCCGTGCTGCCGACTGAC
TTTGAACGCTGCCTCATCCCTGGCGGCGTCGACTTTTGGACGCAGGGCGGCTTCTACTCGCCCGGCGTCTGCTTC
ACAGGCTACAGGCCCCTCTGCACTCAGACGGCTGGCACGGAGACGGCTGTCAGATGTGTGCCCAGGGCCTACAAA
TGCAATGCTGACGGCAAGGACCAACGCTTCGCCGTCTCTGACTTTGACGGCACCCTTCTGTCTGCCCCTGCCTTT
GAGATCCGCTGGCGAGGTGTTGATTTGAAGGTCGGAGCGGATACGTCTTCCCGGGCCTCTGACCGGGGTCTGCCC
AGCGAGACGGTGACGCTCTCCGAGTCGGCTTCCACTGCTTCTTCCACTGCTGCCGCTACTCATTCTTCGAGTCCA
GCCGTCGAGTCAGCTGTGGCTTCGACGAGCTCCGTCGGCGCGGGACTGGTGGCCGCCATTGCCATCGGCACCGTC
GCTGTCGTGCTCATCGTAGGCCTCCTCGGCGGCCTCTTGGCCAGGAGGCGGCGCCGCAAAAGCCATCAGAGCGTC
ACACGACTGAAGCCAGCAACACAGCCGCAAGCCAACGAGATGGAAGACATGCCGATAGGCCCACGCGAACTGCCG
CCACACAACCCCCTGGGTCACAGCTCAGCTGCGCAGCAGCCAACAGCACATGTTTCGGCCGTTTTCGAGATGGCG
GCGGAGCAAGCAACAGACGCCACCCAGTGA
Transcript >Ophcf2|00058
ATGACCCTCTTTCGGTCCATTATTCTCGTTATAGCGCTCTCTCCTTTCATCCACGGGATGGATCTGAGCACCGTC
GTCGACGGAACCATTCCGTCAATGCCCATGACCAAGTCTGCGATGCCCTGCTCAGCCCCCGTGCTGCCGACTGAC
TTTGAACGCTGCCTCATCCCTGGCGGCGTCGACTTTTGGACGCAGGGCGGCTTCTACTCGCCCGGCGTCTGCTTC
ACAGGCTACAGGCCCCTCTGCACTCAGACGGCTGGCACGGAGACGGCTGTCAGATGTGTGCCCAGGGCCTACAAA
TGCAATGCTGACGGCAAGGACCAACGCTTCGCCGTCTCTGACTTTGACGGCACCCTTCTGTCTGCCCCTGCCTTT
GAGATCCGCTGGCGAGGTGTTGATTTGAAGGTCGGAGCGGATACGTCTTCCCGGGCCTCTGACCGGGGTCTGCCC
AGCGAGACGGTGACGCTCTCCGAGTCGGCTTCCACTGCTTCTTCCACTGCTGCCGCTACTCATTCTTCGAGTCCA
GCCGTCGAGTCAGCTGTGGCTTCGACGAGCTCCGTCGGCGCGGGACTGGTGGCCGCCATTGCCATCGGCACCGTC
GCTGTCGTGCTCATCGTAGGCCTCCTCGGCGGCCTCTTGGCCAGGAGGCGGCGCCGCAAAAGCCATCAGAGCGTC
ACACGACTGAAGCCAGCAACACAGCCGCAAGCCAACGAGATGGAAGACATGCCGATAGGCCCACGCGAACTGCCG
CCACACAACCCCCTGGGTCACAGCTCAGCTGCGCAGCAGCCAACAGCACATGTTTCGGCCGTTTTCGAGATGGCG
GCGGAGCAAGCAACAGACGCCACCCAGTGA
Gene >Ophcf2|00058
ATGACCCTCTTTCGGTCCATTATTCTCGTTATAGCGCTCTCTCCTTTCATCCACGGGATGGATCTGAGCACCGTC
GTCGACGGAACCATTCCGTCAATGCCCATGACCAAGTCTGCGATGCCCTGCTCAGCCCCCGTGCTGCCGACTGAC
TTTGAACGCTGCCTCATCCCTGGCGGCGTCGACTTTTGGACGCAGGGCGGCTTCTACTCGCCCGGCGTCTGCTTC
ACAGGCTACAGGCCCCTCTGCACTCAGACGGCTGGCACGGAGACGGCTGTCAGATGTGTGCCCAGGTGAGACCGA
ACCCCATCTTCGCGGGGGCTTCCGTGGTCGCTGACTATGCGGCTGCAGGGCCTACAAATGCAATGCTGACGGCAA
GGACCAACGCTTCGCCGTCTCTGACTTTGACGGCACCCTTCTGTCTGCCCCTGCCTTTGAGATCCGCTGGCGAGG
TGTTGATTTGAAGGTCGGAGCGGATACGTCTTCCCGGGCCTCTGACCGGGGTCTGCCCAGCGAGACGGTGACGCT
CTCCGAGTCGGCTTCCACTGCTTCTTCCACTGCTGCCGCTACTCATTCTTCGAGTCCAGCCGTCGAGTCAGCTGT
GGCTTCGACGAGCTCCGTCGGCGCGGGACTGGTGGCCGCCATTGCCATCGGCACCGTCGCTGTCGTGCTCATCGT
AGGCCTCCTCGGCGGCCTCTTGGCCAGGAGGCGGCGCCGCAAAAGCCATCAGAGCGTCACACGACTGAAGCCAGC
AACACAGCCGCAAGCCAACGAGATGGAAGACATGCCGATAGGCCCACGCGAACTGCCGCCACACAACCCCCTGGG
TCACAGCTCAGCTGCGCAGCAGCCAACAGCACATGTTTCGGCCGTTTTCGAGATGGCGGCGGAGCAAGCAACAGA
CGCCACCCAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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