Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00042
Gene name
Locationscaffold_01:111922..113282
Strand+
Gene length (bp)1360
Transcript length (bp)1275
Coding sequence length (bp)1275
Protein length (aa) 425

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 58 80 22
2 139 161 22
3 189 208 19
4 270 292 22
5 299 321 22
6 331 350 19
7 371 393 22
8 397 419 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00042
MASLTRRLPRQAGPVEVKTVKLSTTLISDETSRKEHAQQEQRQRQKPPPLTDFGDSRIVTFWLLTIGSTLSFVLW
VVAATHVSHTSVRTRRQQVDSKTIMTTNSTSVLGFSPSPALDDALTLASSLKAENANVSIDIWFAVALTAALDAI
AVVLTFNGLLIRRFHYAVSQRVMFVASAMSYGALQRHGLVGRHPLAAVVVGLGLYLLFDRALDRFELLVPTASLK
AASRWGSLQRYSADLSIVEMSWPRASFLAACVGGFGLSLTMAVPSPWSALVPILHILFESVFLSAMGAKRTARYL
VLCSPVFFATICVHWGVSALVTAPRLAIRPWVFVSLVLVGRGLLDLLLKTSLRHRAELRWARSEALVSTRILVIL
CIGLVTLHHVGTGIVTYIKPTMVLAIYGLNGAGFLAVASYNVAFNLKVG*
Coding >Ophcf2|00042
ATGGCCTCCCTCACGCGCCGGCTTCCTCGTCAAGCCGGACCCGTCGAGGTCAAGACGGTAAAGCTGTCAACGACA
CTAATTTCGGATGAAACCTCTCGAAAAGAGCATGCACAACAAGAACAACGACAACGACAAAAACCACCTCCGCTG
ACGGACTTTGGTGACAGCCGCATCGTCACCTTCTGGCTCCTCACCATCGGAAGCACCCTCTCCTTCGTCCTCTGG
GTCGTAGCCGCAACTCATGTCTCTCACACGTCGGTCCGGACCCGACGTCAACAGGTCGACTCGAAGACCATCATG
ACGACCAACTCGACCTCTGTCCTCGGCTTCTCCCCATCACCAGCCCTCGACGACGCCCTTACTCTCGCCTCGTCA
CTAAAGGCGGAAAATGCCAACGTATCCATCGACATCTGGTTCGCAGTCGCCCTCACAGCAGCCCTCGATGCCATC
GCCGTCGTCCTCACCTTCAACGGACTGCTGATCCGTCGCTTCCATTACGCCGTCTCGCAACGAGTCATGTTCGTC
GCCTCGGCAATGTCGTACGGCGCGTTGCAGCGACACGGCCTCGTTGGTCGCCATCCCCTGGCGGCCGTCGTCGTC
GGCCTCGGACTATACCTGCTCTTCGACCGCGCCCTCGACCGATTCGAGCTCCTCGTTCCGACCGCTAGCCTCAAG
GCGGCCTCGAGATGGGGCTCGCTGCAGCGGTACAGCGCCGATCTGAGCATCGTCGAGATGTCTTGGCCCCGGGCT
TCGTTCCTGGCTGCCTGCGTCGGGGGCTTCGGCCTGTCACTGACCATGGCGGTGCCTTCACCGTGGTCGGCGCTG
GTGCCCATTCTTCACATCTTGTTCGAGTCCGTCTTCCTATCCGCCATGGGTGCCAAGAGGACGGCCCGTTATCTC
GTCCTCTGCTCGCCCGTCTTCTTCGCCACCATATGCGTCCACTGGGGGGTATCGGCCCTGGTAACAGCGCCTCGC
CTCGCCATCCGCCCCTGGGTCTTCGTCTCCCTCGTCCTGGTTGGACGCGGCTTGCTCGACCTGCTCCTCAAGACC
AGCCTCCGGCACCGGGCCGAGCTCCGCTGGGCTCGAAGCGAGGCCCTCGTCTCCACCCGGATCCTCGTTATCCTC
TGCATCGGCCTCGTCACGCTTCACCACGTCGGCACGGGCATTGTGACCTACATCAAGCCGACCATGGTGCTGGCC
ATCTATGGCCTCAATGGTGCTGGCTTCCTCGCCGTGGCATCGTACAACGTCGCCTTCAACCTCAAAGTCGGCTAG
Transcript >Ophcf2|00042
ATGGCCTCCCTCACGCGCCGGCTTCCTCGTCAAGCCGGACCCGTCGAGGTCAAGACGGTAAAGCTGTCAACGACA
CTAATTTCGGATGAAACCTCTCGAAAAGAGCATGCACAACAAGAACAACGACAACGACAAAAACCACCTCCGCTG
ACGGACTTTGGTGACAGCCGCATCGTCACCTTCTGGCTCCTCACCATCGGAAGCACCCTCTCCTTCGTCCTCTGG
GTCGTAGCCGCAACTCATGTCTCTCACACGTCGGTCCGGACCCGACGTCAACAGGTCGACTCGAAGACCATCATG
ACGACCAACTCGACCTCTGTCCTCGGCTTCTCCCCATCACCAGCCCTCGACGACGCCCTTACTCTCGCCTCGTCA
CTAAAGGCGGAAAATGCCAACGTATCCATCGACATCTGGTTCGCAGTCGCCCTCACAGCAGCCCTCGATGCCATC
GCCGTCGTCCTCACCTTCAACGGACTGCTGATCCGTCGCTTCCATTACGCCGTCTCGCAACGAGTCATGTTCGTC
GCCTCGGCAATGTCGTACGGCGCGTTGCAGCGACACGGCCTCGTTGGTCGCCATCCCCTGGCGGCCGTCGTCGTC
GGCCTCGGACTATACCTGCTCTTCGACCGCGCCCTCGACCGATTCGAGCTCCTCGTTCCGACCGCTAGCCTCAAG
GCGGCCTCGAGATGGGGCTCGCTGCAGCGGTACAGCGCCGATCTGAGCATCGTCGAGATGTCTTGGCCCCGGGCT
TCGTTCCTGGCTGCCTGCGTCGGGGGCTTCGGCCTGTCACTGACCATGGCGGTGCCTTCACCGTGGTCGGCGCTG
GTGCCCATTCTTCACATCTTGTTCGAGTCCGTCTTCCTATCCGCCATGGGTGCCAAGAGGACGGCCCGTTATCTC
GTCCTCTGCTCGCCCGTCTTCTTCGCCACCATATGCGTCCACTGGGGGGTATCGGCCCTGGTAACAGCGCCTCGC
CTCGCCATCCGCCCCTGGGTCTTCGTCTCCCTCGTCCTGGTTGGACGCGGCTTGCTCGACCTGCTCCTCAAGACC
AGCCTCCGGCACCGGGCCGAGCTCCGCTGGGCTCGAAGCGAGGCCCTCGTCTCCACCCGGATCCTCGTTATCCTC
TGCATCGGCCTCGTCACGCTTCACCACGTCGGCACGGGCATTGTGACCTACATCAAGCCGACCATGGTGCTGGCC
ATCTATGGCCTCAATGGTGCTGGCTTCCTCGCCGTGGCATCGTACAACGTCGCCTTCAACCTCAAAGTCGGCTAG
Gene >Ophcf2|00042
ATGGCCTCCCTCACGCGCCGGCTTCCTCGTCAAGCCGGACCCGTCGAGGTCAAGACGGTAAAGCTGTCAACGACA
CTAATTTCGGATGAAACCTCTCGAAAAGAGCATGCACAACAAGAACAACGACAACGACAAAAACCACCTCCGCTG
ACGGACTTTGGTGACAGCCGCATCGTCACCTTCTGGCTCCTCACCATCGGAAGCACCCTCTCCTTCGTCCTCTGG
GTCGTAGCCGCAACTCATGTCTCTCACACGTCGGTCCGGACCCGACGTCAACAGGTCGACTCGAAGACCATCATG
ACGACCAACTCGACCTCTGTCCTCGGCTTCTCCCCATCACCAGCCCTCGACGACGCCCTTACTCTCGCCTCGTCA
CTAAAGGCGGAAAATGCCAACGTATCCATCGACATCTGGTTCGCAGTCGCCCTCACAGCAGCCCTCGATGCCATC
GCCGTCGTCCTCACCTTCAACGGACTGCTGATCCGTCGCTTCCATTACGCCGTCTCGCAACGAGTCATGTTCGTC
GCCTCGGCAATGTCGTACGGCGCGTTGCAGCGACACGGCCTCGTTGGTCGCCATCCCCTGGCGGCCGTCGTCGTC
GGCCTCGGACTATACCTGCTCTTCGACCGCGCCCTCGACCGATTCGAGCTCCTCGTTCCGACCGCTAGCCTCAAG
GCGGCCTCGAGATGGGGCTCGCTGCAGCGGTACAGCGCCGATCTGAGCATCGTCGAGATGTCTTGGCCCCGGGCT
TCGTTCCTGGCTGCCTGCGTCGGGGGCTTCGGCCTGTCACTGACCATGGCGGTGCCTTCACCGTGGTCGGCGCTG
GTGCCCATTCTTCACATCTTGTTCGAGGTGAGCTTCTTCTCCTTCTCTCCCTCCCTCCCCCCCTCTCTCTCTCTC
TTCTCTCTTCTCTAAACTCACCTCTTTCACTCTGTAGTCCGTCTTCCTATCCGCCATGGGTGCCAAGAGGACGGC
CCGTTATCTCGTCCTCTGCTCGCCCGTCTTCTTCGCCACCATATGCGTCCACTGGGGGGTATCGGCCCTGGTAAC
AGCGCCTCGCCTCGCCATCCGCCCCTGGGTCTTCGTCTCCCTCGTCCTGGTTGGACGCGGCTTGCTCGACCTGCT
CCTCAAGACCAGCCTCCGGCACCGGGCCGAGCTCCGCTGGGCTCGAAGCGAGGCCCTCGTCTCCACCCGGATCCT
CGTTATCCTCTGCATCGGCCTCGTCACGCTTCACCACGTCGGCACGGGCATTGTGACCTACATCAAGCCGACCAT
GGTGCTGGCCATCTATGGCCTCAATGGTGCTGGCTTCCTCGCCGTGGCATCGTACAACGTCGCCTTCAACCTCAA
AGTCGGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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