Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00041
Gene name
Locationscaffold_01:109549..111126
Strand-
Gene length (bp)1577
Transcript length (bp)1299
Coding sequence length (bp)1299
Protein length (aa) 433

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 2.5E-24 231 346
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 1.4E-15 216 349

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 54 0.45

Transmembrane Domains

Domain # Start End Length
1 121 143 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00041
MGGREKGRGKEEEKRKLKKKKKKKKKKKKKKKKKKKKKQKKKQKKKKKKKKKKKQKKKKKKQKKKQKKKKKKKKQ
KKKQKKKKKKQKKKKKKKKKKKKHTFDLNFSFSFNKFEKATSKMPSNHHLIPLILALPPLVAVLFLLLGDRILGS
LAAAAWLALTSRALSRAGLNPSAGAPCRGRWEEELVVVTGAAGDWGGSWTPLHLHPHRRHIPPSIQAARSEILSR
LSRPPTALVATAGSLPSGGTPLLTTSESDLRETLDVNLLGVIFCVQAFMPAMMEARRGHVLVTSSVAGFSPAAGV
VAYAASKAALTAVVEGLQTEMKHLWANAGVKISAVFPAAVRTKMFEGMELPVPEALMPMLGAGEVAERMVGILAD
GESDMVMMPALALTSWWIPAMPRWVRVMIQDAGARGTAKLVERARRRVEGKGGRWVS*
Coding >Ophcf2|00041
ATGGGGGGAAGAGAGAAGGGAAGAGGAAAAGAGGAAGAGAAGAGGAAGTTGAAGAAGAAGAAGAAGAAGAAAAAG
AAGAAGAAGAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGCAGAAGAAGAAGCAGAAGAAGAAGAAGAAGAAGAAG
AAGAAGAAGAAGCAGAAGAAGAAGAAGAAGAAGCAGAAGAAGAAGCAGAAGAAGAAGAAGAAGAAGAAGAAGCAG
AAGAAGAAGCAGAAGAAGAAGAAGAAGAAGCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCACACC
TTCGACCTCAACTTCAGCTTCAGCTTCAACAAATTCGAAAAGGCTACATCAAAGATGCCCAGCAACCACCACCTC
ATCCCCCTCATCCTCGCCCTTCCCCCCCTCGTCGCCGTCCTCTTCCTCCTCCTGGGCGACAGGATCCTCGGCAGC
CTCGCAGCGGCGGCATGGCTCGCGCTGACTAGCCGGGCCCTCAGCAGGGCCGGCCTCAACCCCTCTGCGGGAGCG
CCTTGTCGGGGCCGCTGGGAGGAGGAGCTGGTGGTTGTCACGGGGGCAGCGGGGGATTGGGGAGGTTCTTGGACA
CCGCTCCATCTTCATCCACACAGACGTCACATCCCCCCTTCCATCCAAGCCGCCCGCTCCGAAATCCTCTCCCGC
CTCTCCCGCCCCCCGACCGCCCTCGTCGCCACGGCCGGAAGCCTCCCCTCAGGCGGAACCCCCCTCCTGACGACC
AGCGAGTCGGACCTCCGCGAAACGCTAGACGTCAACCTCCTCGGCGTCATCTTCTGCGTCCAGGCCTTCATGCCC
GCCATGATGGAGGCCCGTCGCGGACACGTCCTCGTCACCTCTTCCGTCGCAGGGTTTTCCCCCGCCGCGGGCGTC
GTTGCTTACGCCGCCAGCAAGGCCGCCTTGACGGCTGTGGTTGAAGGGTTGCAGACGGAGATGAAGCATCTTTGG
GCGAACGCGGGCGTCAAGATCAGTGCCGTGTTTCCGGCTGCCGTTAGGACCAAGATGTTTGAGGGGATGGAGTTG
CCGGTTCCCGAGGCTTTGATGCCCATGTTGGGGGCTGGGGAGGTTGCGGAGAGGATGGTCGGGATTCTTGCTGAT
GGGGAGAGTGACATGGTCATGATGCCTGCGTTGGCGCTTACCAGCTGGTGGATTCCGGCGATGCCGAGGTGGGTT
AGGGTCATGATCCAGGATGCTGGGGCGAGGGGGACGGCCAAGTTGGTTGAGAGGGCGAGGAGGAGGGTGGAAGGG
AAGGGGGGTCGATGGGTGAGTTGA
Transcript >Ophcf2|00041
ATGGGGGGAAGAGAGAAGGGAAGAGGAAAAGAGGAAGAGAAGAGGAAGTTGAAGAAGAAGAAGAAGAAGAAAAAG
AAGAAGAAGAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGCAGAAGAAGAAGCAGAAGAAGAAGAAGAAGAAGAAG
AAGAAGAAGAAGCAGAAGAAGAAGAAGAAGAAGCAGAAGAAGAAGCAGAAGAAGAAGAAGAAGAAGAAGAAGCAG
AAGAAGAAGCAGAAGAAGAAGAAGAAGAAGCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCACACC
TTCGACCTCAACTTCAGCTTCAGCTTCAACAAATTCGAAAAGGCTACATCAAAGATGCCCAGCAACCACCACCTC
ATCCCCCTCATCCTCGCCCTTCCCCCCCTCGTCGCCGTCCTCTTCCTCCTCCTGGGCGACAGGATCCTCGGCAGC
CTCGCAGCGGCGGCATGGCTCGCGCTGACTAGCCGGGCCCTCAGCAGGGCCGGCCTCAACCCCTCTGCGGGAGCG
CCTTGTCGGGGCCGCTGGGAGGAGGAGCTGGTGGTTGTCACGGGGGCAGCGGGGGATTGGGGAGGTTCTTGGACA
CCGCTCCATCTTCATCCACACAGACGTCACATCCCCCCTTCCATCCAAGCCGCCCGCTCCGAAATCCTCTCCCGC
CTCTCCCGCCCCCCGACCGCCCTCGTCGCCACGGCCGGAAGCCTCCCCTCAGGCGGAACCCCCCTCCTGACGACC
AGCGAGTCGGACCTCCGCGAAACGCTAGACGTCAACCTCCTCGGCGTCATCTTCTGCGTCCAGGCCTTCATGCCC
GCCATGATGGAGGCCCGTCGCGGACACGTCCTCGTCACCTCTTCCGTCGCAGGGTTTTCCCCCGCCGCGGGCGTC
GTTGCTTACGCCGCCAGCAAGGCCGCCTTGACGGCTGTGGTTGAAGGGTTGCAGACGGAGATGAAGCATCTTTGG
GCGAACGCGGGCGTCAAGATCAGTGCCGTGTTTCCGGCTGCCGTTAGGACCAAGATGTTTGAGGGGATGGAGTTG
CCGGTTCCCGAGGCTTTGATGCCCATGTTGGGGGCTGGGGAGGTTGCGGAGAGGATGGTCGGGATTCTTGCTGAT
GGGGAGAGTGACATGGTCATGATGCCTGCGTTGGCGCTTACCAGCTGGTGGATTCCGGCGATGCCGAGGTGGGTT
AGGGTCATGATCCAGGATGCTGGGGCGAGGGGGACGGCCAAGTTGGTTGAGAGGGCGAGGAGGAGGGTGGAAGGG
AAGGGGGGTCGATGGGTGAGTTGA
Gene >Ophcf2|00041
ATGGGGGGAAGAGAGAAGGTAGATAACTGGGCTGGGGGGAAGGGGAGGCTTCGTTCATGTTGTATTGAGGAGGGA
GAAGGGAAGAGGAAAAGAGGAAGAGAAGAGGAAGTTGAAGAAGAAGAAGAAGAAGAAAAAGAAGAAGAAGAAGAA
GAAAAAGAAGAAGAAGAAGAAGAAGCAGAAGAAGAAGCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCA
GAAGAAGAAGAAGAAGAAGCAGAAGAAGAAGCAGAAGAAGAAGAAGAAGAAGAAGAAGCAGAAGAAGAAGCAGAA
GAAGAAGAAGAAGAAGCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCACACCTTCGACCTCAACTT
CAGCTTCAGCTTCAACAAATTCGAAAAGGCTACATCAAAGATGCCCAGCAACCACCACCTCATCCCCCTCATCCT
CGCCCTTCCCCCCCTCGTCGCCGTCCTCTTCCTCCTCCTGGGCGACAGGATCCTCGGCAGCCTCGCAGCGGCGGC
ATGGCTCGCGCTGACTAGCCGGGCCCTCAGCAGGGCCGGCCTCAACCCCTCTGCGGGAGCGCCTTGTCGGGGCCG
CTGGGAGGAGGAGCTGGTGGTTGTCACGGGGGCAGCGGGGGATTGGGGAGGTTGTGAGCAGGTTGGAAGGGTTGG
GGCTGGGGTTGTGGTTCTTGATGTTGTTGCGCCGGAGAAGCTTGGTGAGTCTTTTCTTGTTCTCTCTTTTTCCCG
TTGGGGGGGAGGTTTTCATGATGATAGGACAGTGAAGACTGACGACGTTCGTCCAGGACACCGCTCCATCTTCAT
CCACACAGACGTCACATCCCCCCTTCCATCCAAGCCGCCCGCTCCGAAATCCTCTCCCGCCTCTCCCGCCCCCCG
ACCGCCCTCGTCGCCACGGCCGGAAGCCTCCCCTCAGGCGGAACCCCCCTCCTGACGACCAGCGAGTCGGACCTC
CGCGAAACGCTAGACGTCAACCTCCTCGGCGTCATCTTCTGCGTCCAGGCCTTCATGCCCGCCATGATGGAGGCC
CGTCGCGGACACGTCCTCGTCACCTCTTCCGTCGCAGGGTTTTCCCCCGCCGCGGGCGTCGTTGCTTACGCCGCC
AGCAAGGCCGCCTTGACGGCTGTGGTTGAAGGGTTGCAGACGGAGATGAAGCATCTTTGGGCGAACGCGGGCGTC
AAGATCAGTGCCGTGTTTCCGGCTGCCGTTAGGACCAAGATGTTTGAGGGGATGGAGTTGCCGGTTCCCGAGGCT
TTGATGCCCATGTTGGGGGCTGGGGAGGTTGCGGAGAGGATGGTCGGGATTCTTGCTGATGGGGAGAGGTGAGTT
TTCTTTCTTTTTTTTTTCTCTTTTCTTGTCACTGTTCTTATGGCATGCTGACTTGAGGCAGTGACATGGTCATGA
TGCCTGCGTTGGCGCTTACCAGCTGGTGGATTCCGGCGATGCCGAGGTGGGTTAGGGTCATGATCCAGGATGCTG
GGGCGAGGGGGACGGCCAAGTTGGTTGAGAGGGCGAGGAGGAGGGTGGAAGGGAAGGGGGGTCGATGGGTGAGTT
GA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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