Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00040
Gene name
Locationscaffold_01:107994..109365
Strand+
Gene length (bp)1371
Transcript length (bp)1191
Coding sequence length (bp)1191
Protein length (aa) 397

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.5

Transmembrane Domains

Domain # Start End Length
1 4 23 19
2 40 59 19
3 95 117 22
4 129 151 22
5 180 202 22
6 214 236 22
7 251 270 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00040
MAAVEAWVYLGICTALVLLRLYARLHTQAGGGGLHLDDHLMALAIPLFVAVVIVAQVIQSETQNLANNDMTPEYR
ASLDPLSPEFAMRVRGSQLHMAGWTIYVSLLWTLKICWLLLYRRFGERVKYIKLKINLGVVIVASTYVLVIFVVM
FACRPIGRNWQISPDPGDACHPAVSKVQAIITALANLGTDMYIIWIPLPIIWGARISKLDKTILGTMFVACLVIT
MSVGLARCGLILTNSSGNTEFVGRWSYREAFVAIVISNMPVLLPWTRQKLSRHTKQKDSDAIPAPLRSLSIGSDQ
TIVVPGGPDSVKADLESGLRQKHHLERGFDDDDDDDDDDDDDDNDDDVVVVEGVSHLEERRPDARLQEGESEEGR
KRDVRGVDKDETEERETLPPV*
Coding >Ophcf2|00040
ATGGCGGCTGTGGAGGCGTGGGTTTATCTGGGCATCTGCACAGCGCTGGTGCTGTTGCGGCTGTACGCCAGGCTT
CATACGCAGGCCGGTGGAGGAGGCTTGCATCTTGACGACCACTTGATGGCGCTGGCTATTCCGCTGTTTGTGGCC
GTGGTTATCGTGGCACAGGTGATTCAATCGGAGACGCAAAACCTAGCCAACAACGACATGACGCCCGAGTATCGA
GCCTCGCTCGACCCCCTGAGCCCCGAATTTGCCATGCGTGTCCGCGGCTCTCAACTCCACATGGCCGGCTGGACC
ATCTATGTATCGCTCCTCTGGACACTCAAGATCTGCTGGCTGCTTCTATACCGACGCTTCGGCGAGCGTGTCAAG
TACATAAAGCTCAAGATCAACCTCGGCGTCGTCATCGTGGCATCGACGTACGTGCTCGTCATCTTCGTCGTCATG
TTTGCCTGTCGACCCATCGGTCGGAACTGGCAGATTAGTCCGGATCCCGGTGATGCCTGTCATCCGGCTGTGTCC
AAGGTTCAGGCTATCATCACGGCCTTGGCCAATTTGGGGACCGACATGTATATCATCTGGATTCCGCTTCCTATC
ATCTGGGGCGCCCGCATCTCCAAACTCGACAAGACGATCCTCGGCACCATGTTCGTTGCCTGCCTCGTCATAACC
ATGTCCGTCGGCCTCGCCCGCTGCGGCCTCATCCTCACCAATTCGTCCGGAAACACCGAGTTCGTGGGCCGCTGG
TCATACCGCGAGGCCTTTGTCGCCATCGTCATCTCCAACATGCCCGTCCTCTTGCCCTGGACGCGGCAAAAGCTA
TCCCGACACACCAAGCAGAAAGATTCGGATGCGATTCCCGCGCCGTTGCGGTCCTTGAGCATCGGCTCCGATCAG
ACCATCGTCGTGCCTGGCGGTCCTGATTCCGTCAAGGCGGATCTGGAGTCTGGGCTGCGGCAGAAGCATCATCTG
GAGAGGGGTTTTGATGATGATGATGATGATGATGATGATGATGATGACGACGACAATGATGATGATGTTGTCGTT
GTTGAGGGTGTTTCTCATCTGGAAGAGCGTCGTCCCGATGCTCGGTTACAGGAGGGTGAGTCGGAAGAGGGGAGG
AAGAGAGATGTCAGGGGTGTTGATAAGGATGAGACGGAGGAGCGCGAGACGCTGCCGCCTGTATGA
Transcript >Ophcf2|00040
ATGGCGGCTGTGGAGGCGTGGGTTTATCTGGGCATCTGCACAGCGCTGGTGCTGTTGCGGCTGTACGCCAGGCTT
CATACGCAGGCCGGTGGAGGAGGCTTGCATCTTGACGACCACTTGATGGCGCTGGCTATTCCGCTGTTTGTGGCC
GTGGTTATCGTGGCACAGGTGATTCAATCGGAGACGCAAAACCTAGCCAACAACGACATGACGCCCGAGTATCGA
GCCTCGCTCGACCCCCTGAGCCCCGAATTTGCCATGCGTGTCCGCGGCTCTCAACTCCACATGGCCGGCTGGACC
ATCTATGTATCGCTCCTCTGGACACTCAAGATCTGCTGGCTGCTTCTATACCGACGCTTCGGCGAGCGTGTCAAG
TACATAAAGCTCAAGATCAACCTCGGCGTCGTCATCGTGGCATCGACGTACGTGCTCGTCATCTTCGTCGTCATG
TTTGCCTGTCGACCCATCGGTCGGAACTGGCAGATTAGTCCGGATCCCGGTGATGCCTGTCATCCGGCTGTGTCC
AAGGTTCAGGCTATCATCACGGCCTTGGCCAATTTGGGGACCGACATGTATATCATCTGGATTCCGCTTCCTATC
ATCTGGGGCGCCCGCATCTCCAAACTCGACAAGACGATCCTCGGCACCATGTTCGTTGCCTGCCTCGTCATAACC
ATGTCCGTCGGCCTCGCCCGCTGCGGCCTCATCCTCACCAATTCGTCCGGAAACACCGAGTTCGTGGGCCGCTGG
TCATACCGCGAGGCCTTTGTCGCCATCGTCATCTCCAACATGCCCGTCCTCTTGCCCTGGACGCGGCAAAAGCTA
TCCCGACACACCAAGCAGAAAGATTCGGATGCGATTCCCGCGCCGTTGCGGTCCTTGAGCATCGGCTCCGATCAG
ACCATCGTCGTGCCTGGCGGTCCTGATTCCGTCAAGGCGGATCTGGAGTCTGGGCTGCGGCAGAAGCATCATCTG
GAGAGGGGTTTTGATGATGATGATGATGATGATGATGATGATGATGACGACGACAATGATGATGATGTTGTCGTT
GTTGAGGGTGTTTCTCATCTGGAAGAGCGTCGTCCCGATGCTCGGTTACAGGAGGGTGAGTCGGAAGAGGGGAGG
AAGAGAGATGTCAGGGGTGTTGATAAGGATGAGACGGAGGAGCGCGAGACGCTGCCGCCTGTATGA
Gene >Ophcf2|00040
ATGGCGGCTGTGGAGGCGTGGGTTTATCTGGGCATCTGCACAGCGCTGGTGCTGTTGCGGCTGTACGCCAGGCTT
CATACGCAGGCCGGTGGAGGAGGCTTGCATCTTGACGACCACTTGATGGCGCTGGCTATTGTGAGTTTCTGGAGT
CTGTTGAGTGTTGAGTGGGAGATTGGGTTGCTTATACTGGTGATAGCCGCTGTTTGTGGCCGTGGTTATCGTGGC
ACAGGTGATTCAATCGGAGACGCAAAACCTAGCCAACAACGAGTGAGTCCGTCACATCATCATCTCTTGATATCT
CATCTTAACCAGACAACAACAGCATGACGCCCGAGTATCGAGCCTCGCTCGACCCCCTGAGCCCCGAATTTGCCA
TGCGTGTCCGCGGCTCTCAACTCCACATGGCCGGCTGGACCATCTATGTATCGCTCCTCTGGACACTCAAGATCT
GCTGGCTGCTTCTATACCGACGCTTCGGCGAGCGTGTCAAGTACATAAAGCTCAAGATCAACCTCGGCGTCGTCA
TCGTGGCATCGACGTACGTGCTCGTCATCTTCGTCGTCATGTTTGCCTGTCGACCCATCGGTCGGAACTGGCAGA
TTAGTCCGGATCCCGGTGATGCCTGTCATCCGGCTGTGTCCAAGGTTCAGGCTATCATCACGGCCTTGGCCAATT
TGGGGACCGACATGTATATCATCTGGATTCCGCTTCCTGTGAGTTCTCCCACTCTTCCTCTCCTCTCTGAAAGCG
TGTACTCGACTAACAAAAGACACCAAGATCATCTGGGGCGCCCGCATCTCCAAACTCGACAAGACGATCCTCGGC
ACCATGTTCGTTGCCTGCCTCGTCATAACCATGTCCGTCGGCCTCGCCCGCTGCGGCCTCATCCTCACCAATTCG
TCCGGAAACACCGAGTTCGTGGGCCGCTGGTCATACCGCGAGGCCTTTGTCGCCATCGTCATCTCCAACATGCCC
GTCCTCTTGCCCTGGACGCGGCAAAAGCTATCCCGACACACCAAGCAGAAAGATTCGGATGCGATTCCCGCGCCG
TTGCGGTCCTTGAGCATCGGCTCCGATCAGACCATCGTCGTGCCTGGCGGTCCTGATTCCGTCAAGGCGGATCTG
GAGTCTGGGCTGCGGCAGAAGCATCATCTGGAGAGGGGTTTTGATGATGATGATGATGATGATGATGATGATGAT
GACGACGACAATGATGATGATGTTGTCGTTGTTGAGGGTGTTTCTCATCTGGAAGAGCGTCGTCCCGATGCTCGG
TTACAGGAGGGTGAGTCGGAAGAGGGGAGGAAGAGAGATGTCAGGGGTGTTGATAAGGATGAGACGGAGGAGCGC
GAGACGCTGCCGCCTGTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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