Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00024
Gene name
Locationscaffold_01:70477..70771
Strand+
Gene length (bp)294
Transcript length (bp)294
Coding sequence length (bp)294
Protein length (aa) 98

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03959 FSH1 Serine hydrolase (FSH1) 1.4E-11 2 89

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00024
MRILCVHGAAINGDIFASKTEKLRALLPADYSFVWPDGEHEVTPIQSLSDTYPGPYLSHLEEITTRGIRRSIERL
EACIEEDGPFDGVMAICEVLSF*
Coding >Ophcf2|00024
ATGCGTATTCTCTGCGTCCACGGAGCCGCTATCAACGGCGACATCTTCGCGTCCAAGACGGAAAAGCTTCGAGCT
CTGCTGCCGGCCGACTACTCATTTGTATGGCCCGATGGCGAGCATGAGGTCACACCTATCCAGAGTCTCTCAGAC
ACCTACCCCGGACCCTACCTTTCGCACCTTGAGGAGATCACCACCCGCGGCATCCGCAGATCCATCGAGAGACTC
GAGGCTTGCATCGAGGAGGACGGTCCGTTTGACGGTGTCATGGCCATCTGCGAGGTGCTCTCCTTCTGA
Transcript >Ophcf2|00024
ATGCGTATTCTCTGCGTCCACGGAGCCGCTATCAACGGCGACATCTTCGCGTCCAAGACGGAAAAGCTTCGAGCT
CTGCTGCCGGCCGACTACTCATTTGTATGGCCCGATGGCGAGCATGAGGTCACACCTATCCAGAGTCTCTCAGAC
ACCTACCCCGGACCCTACCTTTCGCACCTTGAGGAGATCACCACCCGCGGCATCCGCAGATCCATCGAGAGACTC
GAGGCTTGCATCGAGGAGGACGGTCCGTTTGACGGTGTCATGGCCATCTGCGAGGTGCTCTCCTTCTGA
Gene >Ophcf2|00024
ATGCGTATTCTCTGCGTCCACGGAGCCGCTATCAACGGCGACATCTTCGCGTCCAAGACGGAAAAGCTTCGAGCT
CTGCTGCCGGCCGACTACTCATTTGTATGGCCCGATGGCGAGCATGAGGTCACACCTATCCAGAGTCTCTCAGAC
ACCTACCCCGGACCCTACCTTTCGCACCTTGAGGAGATCACCACCCGCGGCATCCGCAGATCCATCGAGAGACTC
GAGGCTTGCATCGAGGAGGACGGTCCGTTTGACGGTGTCATGGCCATCTGCGAGGTGCTCTCCTTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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