Protein ID | Ophcf2|00018 |
Gene name | |
Location | scaffold_01:57240..58908 |
Strand | + |
Gene length (bp) | 1668 |
Transcript length (bp) | 1668 |
Coding sequence length (bp) | 1668 |
Protein length (aa) | 556 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01375 | Enterotoxin_a | Heat-labile enterotoxin alpha chain | 1.1E-34 | 2 | 174 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005615 | extracellular space | Yes |
GO:0090729 | toxin activity | Yes |
GO:0005575 | cellular_component | No |
GO:0003674 | molecular_function | No |
GO:0110165 | cellular anatomical entity | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | 0.425 | 0.2773 | 0.6061 | 0.1369 | 0.2626 | 0.5613 | 0.146 | 0.2006 | 0.2293 | 0.2231 |
Orthofinder run ID | 4 |
Orthogroup | 5870 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|00018 MLSPDDLKLQGRFLPRGLDGTRARQTDTAPTISLFDHVRGLPSGTSRFDSGYVSTTTSIAFARRFLHTTLGSQGY IYKMHVSPNFIDTAQTLGQFYAQADESEVSVLGGPLYSQVLSWIEFRQGVEQPETTNPDYDSFKFDEAVWGGVQY QLAGFPDQHVAWKLDPWRRFSDCELVPHLVETCGPRQSSLQFAIHYIELTGIDDDDDDDDDDDDGGGIMAIFERV VIKADDYQKSAQGKQGSEFIEETRRMRSERKQSGFNGTGSTLGFRPASRKDKGRGPDIVYVSSRLSPHEAKHQRG LLPEKEASNKLTGHSSLREAARDGRREVMVSSSCRNRHSAAFIYAVRATPNMVQSKTNGSVVSIVGGVRWPQVLG WTSVTSRDKLKDWKTPSAIESNPDYDSRFDDLGGLFHGPDEPDLETSSGLTSFMRDNGRSVGWTGSFPLFKPSFS TASRRDYSRMARARRKKSAPDASFYHHQQSPWRVADAWAWIKRNAAPVSPVSDAVYLLSPVGDVVEGIEAAADLA EAVDAEDAVKGVIKGLATGEIESQLSEAGS* |
Coding | >Ophcf2|00018 ATGCTCTCCCCTGACGACCTCAAGCTTCAGGGCCGCTTCCTGCCCCGGGGCCTCGACGGGACCCGAGCCCGTCAG ACGGATACGGCGCCAACAATCAGCCTCTTCGATCACGTCCGCGGCCTTCCGTCCGGAACTAGCCGATTCGACTCG GGATACGTGTCGACGACAACGAGCATTGCCTTTGCCAGACGCTTTCTCCACACAACGCTCGGCTCGCAGGGCTAC ATCTATAAGATGCACGTGTCACCCAACTTTATTGATACGGCTCAGACGCTGGGTCAGTTCTACGCTCAGGCCGAC GAGAGCGAGGTTTCGGTTCTCGGCGGTCCGCTGTACTCGCAGGTCCTCAGCTGGATCGAGTTCCGCCAGGGCGTC GAGCAGCCAGAGACGACTAATCCGGACTATGACTCGTTCAAGTTCGACGAGGCCGTCTGGGGCGGCGTCCAGTAC CAGCTGGCCGGCTTCCCGGACCAGCACGTAGCCTGGAAGCTGGACCCGTGGCGCAGGTTTAGCGACTGCGAACTC GTGCCTCACCTGGTTGAGACTTGCGGGCCGAGACAGTCGTCGTTACAGTTTGCCATTCACTATATTGAGTTGACG GGCATCGACGACGACGACGACGACGACGACGACGACGACGACGGCGGCGGTATCATGGCCATCTTCGAGAGGGTG GTAATCAAGGCTGATGACTATCAAAAGTCAGCACAAGGAAAACAGGGTTCAGAGTTCATCGAAGAAACGAGGCGA ATGAGGAGTGAGAGAAAGCAATCCGGCTTCAACGGCACCGGCAGTACCCTCGGCTTCCGGCCCGCTTCCCGCAAG GACAAGGGTCGAGGCCCGGACATCGTCTACGTGAGCAGCCGACTGTCACCGCACGAAGCCAAGCATCAGCGAGGA TTGCTGCCGGAGAAAGAGGCCTCGAACAAGCTCACCGGCCACTCCTCCCTGAGAGAAGCGGCCAGAGACGGTCGA CGAGAAGTCATGGTCTCGTCATCGTGCCGCAATCGTCACTCGGCGGCATTTATCTATGCCGTCCGTGCGACGCCC AACATGGTGCAGAGCAAGACGAATGGGAGCGTCGTATCCATCGTCGGTGGCGTCCGATGGCCTCAAGTTCTTGGC TGGACGAGCGTGACGAGCCGCGACAAGCTGAAGGACTGGAAGACACCGTCAGCGATCGAGAGCAACCCTGACTAT GACAGCCGGTTTGACGACTTGGGTGGCCTCTTCCACGGGCCTGACGAGCCAGACCTAGAGACGTCGTCGGGGCTG ACGAGCTTCATGCGTGACAATGGCAGGTCTGTCGGCTGGACCGGCTCCTTTCCTCTCTTCAAGCCCTCCTTCAGC ACTGCCAGCCGCAGAGACTATTCGCGGATGGCGAGAGCACGCAGAAAAAAGTCGGCACCAGACGCATCGTTTTAT CACCATCAGCAGTCGCCGTGGCGCGTTGCCGACGCCTGGGCGTGGATCAAGCGCAACGCTGCCCCCGTCTCACCC GTCAGCGATGCCGTCTACCTGCTCTCGCCCGTGGGCGACGTCGTGGAGGGTATCGAAGCCGCAGCTGATCTGGCA GAGGCTGTAGACGCTGAAGATGCCGTCAAGGGGGTGATAAAGGGGCTGGCTACTGGCGAGATTGAGAGTCAGCTC TCTGAGGCAGGATCCTAG |
Transcript | >Ophcf2|00018 ATGCTCTCCCCTGACGACCTCAAGCTTCAGGGCCGCTTCCTGCCCCGGGGCCTCGACGGGACCCGAGCCCGTCAG ACGGATACGGCGCCAACAATCAGCCTCTTCGATCACGTCCGCGGCCTTCCGTCCGGAACTAGCCGATTCGACTCG GGATACGTGTCGACGACAACGAGCATTGCCTTTGCCAGACGCTTTCTCCACACAACGCTCGGCTCGCAGGGCTAC ATCTATAAGATGCACGTGTCACCCAACTTTATTGATACGGCTCAGACGCTGGGTCAGTTCTACGCTCAGGCCGAC GAGAGCGAGGTTTCGGTTCTCGGCGGTCCGCTGTACTCGCAGGTCCTCAGCTGGATCGAGTTCCGCCAGGGCGTC GAGCAGCCAGAGACGACTAATCCGGACTATGACTCGTTCAAGTTCGACGAGGCCGTCTGGGGCGGCGTCCAGTAC CAGCTGGCCGGCTTCCCGGACCAGCACGTAGCCTGGAAGCTGGACCCGTGGCGCAGGTTTAGCGACTGCGAACTC GTGCCTCACCTGGTTGAGACTTGCGGGCCGAGACAGTCGTCGTTACAGTTTGCCATTCACTATATTGAGTTGACG GGCATCGACGACGACGACGACGACGACGACGACGACGACGACGGCGGCGGTATCATGGCCATCTTCGAGAGGGTG GTAATCAAGGCTGATGACTATCAAAAGTCAGCACAAGGAAAACAGGGTTCAGAGTTCATCGAAGAAACGAGGCGA ATGAGGAGTGAGAGAAAGCAATCCGGCTTCAACGGCACCGGCAGTACCCTCGGCTTCCGGCCCGCTTCCCGCAAG GACAAGGGTCGAGGCCCGGACATCGTCTACGTGAGCAGCCGACTGTCACCGCACGAAGCCAAGCATCAGCGAGGA TTGCTGCCGGAGAAAGAGGCCTCGAACAAGCTCACCGGCCACTCCTCCCTGAGAGAAGCGGCCAGAGACGGTCGA CGAGAAGTCATGGTCTCGTCATCGTGCCGCAATCGTCACTCGGCGGCATTTATCTATGCCGTCCGTGCGACGCCC AACATGGTGCAGAGCAAGACGAATGGGAGCGTCGTATCCATCGTCGGTGGCGTCCGATGGCCTCAAGTTCTTGGC TGGACGAGCGTGACGAGCCGCGACAAGCTGAAGGACTGGAAGACACCGTCAGCGATCGAGAGCAACCCTGACTAT GACAGCCGGTTTGACGACTTGGGTGGCCTCTTCCACGGGCCTGACGAGCCAGACCTAGAGACGTCGTCGGGGCTG ACGAGCTTCATGCGTGACAATGGCAGGTCTGTCGGCTGGACCGGCTCCTTTCCTCTCTTCAAGCCCTCCTTCAGC ACTGCCAGCCGCAGAGACTATTCGCGGATGGCGAGAGCACGCAGAAAAAAGTCGGCACCAGACGCATCGTTTTAT CACCATCAGCAGTCGCCGTGGCGCGTTGCCGACGCCTGGGCGTGGATCAAGCGCAACGCTGCCCCCGTCTCACCC GTCAGCGATGCCGTCTACCTGCTCTCGCCCGTGGGCGACGTCGTGGAGGGTATCGAAGCCGCAGCTGATCTGGCA GAGGCTGTAGACGCTGAAGATGCCGTCAAGGGGGTGATAAAGGGGCTGGCTACTGGCGAGATTGAGAGTCAGCTC TCTGAGGCAGGATCCTAG |
Gene | >Ophcf2|00018 ATGCTCTCCCCTGACGACCTCAAGCTTCAGGGCCGCTTCCTGCCCCGGGGCCTCGACGGGACCCGAGCCCGTCAG ACGGATACGGCGCCAACAATCAGCCTCTTCGATCACGTCCGCGGCCTTCCGTCCGGAACTAGCCGATTCGACTCG GGATACGTGTCGACGACAACGAGCATTGCCTTTGCCAGACGCTTTCTCCACACAACGCTCGGCTCGCAGGGCTAC ATCTATAAGATGCACGTGTCACCCAACTTTATTGATACGGCTCAGACGCTGGGTCAGTTCTACGCTCAGGCCGAC GAGAGCGAGGTTTCGGTTCTCGGCGGTCCGCTGTACTCGCAGGTCCTCAGCTGGATCGAGTTCCGCCAGGGCGTC GAGCAGCCAGAGACGACTAATCCGGACTATGACTCGTTCAAGTTCGACGAGGCCGTCTGGGGCGGCGTCCAGTAC CAGCTGGCCGGCTTCCCGGACCAGCACGTAGCCTGGAAGCTGGACCCGTGGCGCAGGTTTAGCGACTGCGAACTC GTGCCTCACCTGGTTGAGACTTGCGGGCCGAGACAGTCGTCGTTACAGTTTGCCATTCACTATATTGAGTTGACG GGCATCGACGACGACGACGACGACGACGACGACGACGACGACGGCGGCGGTATCATGGCCATCTTCGAGAGGGTG GTAATCAAGGCTGATGACTATCAAAAGTCAGCACAAGGAAAACAGGGTTCAGAGTTCATCGAAGAAACGAGGCGA ATGAGGAGTGAGAGAAAGCAATCCGGCTTCAACGGCACCGGCAGTACCCTCGGCTTCCGGCCCGCTTCCCGCAAG GACAAGGGTCGAGGCCCGGACATCGTCTACGTGAGCAGCCGACTGTCACCGCACGAAGCCAAGCATCAGCGAGGA TTGCTGCCGGAGAAAGAGGCCTCGAACAAGCTCACCGGCCACTCCTCCCTGAGAGAAGCGGCCAGAGACGGTCGA CGAGAAGTCATGGTCTCGTCATCGTGCCGCAATCGTCACTCGGCGGCATTTATCTATGCCGTCCGTGCGACGCCC AACATGGTGCAGAGCAAGACGAATGGGAGCGTCGTATCCATCGTCGGTGGCGTCCGATGGCCTCAAGTTCTTGGC TGGACGAGCGTGACGAGCCGCGACAAGCTGAAGGACTGGAAGACACCGTCAGCGATCGAGAGCAACCCTGACTAT GACAGCCGGTTTGACGACTTGGGTGGCCTCTTCCACGGGCCTGACGAGCCAGACCTAGAGACGTCGTCGGGGCTG ACGAGCTTCATGCGTGACAATGGCAGGTCTGTCGGCTGGACCGGCTCCTTTCCTCTCTTCAAGCCCTCCTTCAGC ACTGCCAGCCGCAGAGACTATTCGCGGATGGCGAGAGCACGCAGAAAAAAGTCGGCACCAGACGCATCGTTTTAT CACCATCAGCAGTCGCCGTGGCGCGTTGCCGACGCCTGGGCGTGGATCAAGCGCAACGCTGCCCCCGTCTCACCC GTCAGCGATGCCGTCTACCTGCTCTCGCCCGTGGGCGACGTCGTGGAGGGTATCGAAGCCGCAGCTGATCTGGCA GAGGCTGTAGACGCTGAAGATGCCGTCAAGGGGGTGATAAAGGGGCTGGCTACTGGCGAGATTGAGAGTCAGCTC TCTGAGGCAGGATCCTAG |