Fungal Genomics

at Utrecht University

General Properties

Protein IDOphcf2|00012
Gene name
Locationscaffold_01:38317..40364
Strand+
Gene length (bp)2047
Transcript length (bp)1578
Coding sequence length (bp)1578
Protein length (aa) 526

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08386 Abhydrolase_4 TAP-like protein 1.7E-16 387 487
PF00561 Abhydrolase_1 alpha/beta hydrolase fold 5.6E-11 68 226

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 14 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in: Will et al., G3, 2020

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Fungus Fungus in pure culture 1.42 0.23 2.62
Alive In ants, during behavior modification 0.80 0.00 1.68
Dead In ants, recently dead 0.50 0.00 1.07

Differential expression

Label1 Label2 Q-value Significant difference
Alive Fungus 0.206591 no
Alive Dead 0.289549 no
Dead Fungus 0.023715 yes

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophcf2|00012
MLLLLSLLSFATAKPLKWTTCADTFGSALPADCSQLAVPLDYTKPETGPDLQLDLFRIPAATQPAQGSILLNFGG
PGQPGRQTLAILGPVLQAGTVNTLPFTCPDAIFRHRTFWQDSVYPVRDSPATDADLGQLWARGSALAETCGREHN
ETGRLIGTAFTARDIVRVAEAVDGDGLVRYWGFSYGTTLGATLLSMFPDKVDRVILDGVQNPHEYYNADADFEEW
TQSDEVFSAIFTSCAANPHRCRLARPHKSGQELEQTVWTLLESLRVRPRSFRNSSFVLDDGTLRGLLADALYSTA
NWPNVTTVLDMLISGPLDETFVLDRLGERASLPLGGNTTVIDEAEKRFMKMAMPLFGIHCIDRRARSGSLDALLP
ALHRLLNTSRAMGGAGANSAVACAQWKLEPAERYAGDFRVRPRAPVLIVGNSHDGHTPIRSAFNVSSGFEGSIVL
EVDGYGHTSLGLPSACLLRTVSSYWRDGKLPAPGTICRVDAPPFSAITWADILKNGTGLQKRHRGGAEPRPWRLL
*
Coding >Ophcf2|00012
ATGCTGCTTCTCCTCTCCCTCCTCTCATTCGCCACCGCTAAACCTCTGAAATGGACAACCTGCGCCGACACCTTC
GGCAGTGCCCTCCCGGCCGACTGCTCCCAGCTGGCGGTCCCGCTAGACTACACGAAGCCCGAGACGGGACCGGAC
TTGCAGCTGGATCTCTTCCGGATTCCCGCGGCCACGCAGCCGGCTCAGGGCAGCATCTTGCTCAACTTTGGGGGG
CCAGGGCAGCCGGGGAGGCAGACCTTGGCTATCCTCGGGCCGGTGCTGCAGGCCGGCACCGTCAACACACTACCC
TTTACCTGCCCGGACGCCATCTTCCGCCACAGAACCTTCTGGCAGGACTCCGTCTACCCCGTTCGCGACTCGCCG
GCCACGGACGCCGATCTGGGCCAGTTGTGGGCCCGTGGCTCGGCGCTGGCGGAGACTTGCGGTCGCGAGCATAAC
GAGACGGGGCGGTTAATTGGGACGGCGTTTACGGCGAGGGACATTGTGAGGGTTGCTGAGGCGGTGGATGGGGAT
GGGCTGGTGCGATATTGGGGCTTCTCGTACGGAACGACTCTGGGGGCTACGCTGCTGTCCATGTTCCCGGATAAG
GTCGACAGGGTGATTCTCGATGGGGTGCAGAACCCGCACGAGTATTACAACGCCGACGCCGACTTTGAGGAGTGG
ACCCAGTCAGACGAAGTCTTCTCCGCCATCTTTACCTCCTGCGCCGCAAACCCGCACCGGTGCCGTCTCGCCCGG
CCCCACAAATCCGGTCAGGAGCTAGAGCAAACGGTGTGGACCCTCCTTGAATCACTCCGGGTCCGGCCCCGATCC
TTCCGAAACTCCTCCTTCGTCCTCGATGATGGCACTCTTCGCGGCCTCCTCGCCGACGCCCTCTACTCGACCGCC
AACTGGCCCAACGTCACGACCGTGCTCGACATGCTCATCTCCGGACCGCTGGATGAGACCTTTGTGCTGGACCGT
CTCGGAGAACGGGCTTCGCTCCCGCTGGGCGGCAACACGACCGTCATAGACGAAGCAGAGAAGCGCTTCATGAAG
ATGGCGATGCCCCTATTCGGAATCCACTGCATTGATCGCCGGGCCCGCTCCGGCTCCCTAGACGCCCTGCTCCCG
GCTTTGCATCGGCTACTGAATACAAGCCGCGCCATGGGCGGAGCCGGGGCCAACTCGGCCGTTGCCTGTGCCCAG
TGGAAGCTGGAGCCGGCGGAGCGGTATGCCGGGGACTTCCGGGTGCGACCGCGGGCTCCGGTGCTGATTGTGGGA
AACTCGCACGACGGACATACGCCCATCCGGTCGGCGTTTAATGTCAGTTCGGGCTTTGAGGGGAGTATCGTCCTG
GAAGTTGACGGCTACGGGCACACCTCTCTTGGCCTACCCTCGGCCTGCCTCCTCCGCACCGTCTCCTCCTACTGG
CGAGACGGAAAGCTACCGGCTCCGGGGACCATCTGCCGCGTCGACGCCCCGCCCTTTTCAGCCATCACCTGGGCC
GACATACTGAAGAACGGCACGGGGCTGCAGAAGAGGCATCGTGGCGGCGCGGAGCCGAGGCCGTGGCGTCTGCTG
TAA
Transcript >Ophcf2|00012
ATGCTGCTTCTCCTCTCCCTCCTCTCATTCGCCACCGCTAAACCTCTGAAATGGACAACCTGCGCCGACACCTTC
GGCAGTGCCCTCCCGGCCGACTGCTCCCAGCTGGCGGTCCCGCTAGACTACACGAAGCCCGAGACGGGACCGGAC
TTGCAGCTGGATCTCTTCCGGATTCCCGCGGCCACGCAGCCGGCTCAGGGCAGCATCTTGCTCAACTTTGGGGGG
CCAGGGCAGCCGGGGAGGCAGACCTTGGCTATCCTCGGGCCGGTGCTGCAGGCCGGCACCGTCAACACACTACCC
TTTACCTGCCCGGACGCCATCTTCCGCCACAGAACCTTCTGGCAGGACTCCGTCTACCCCGTTCGCGACTCGCCG
GCCACGGACGCCGATCTGGGCCAGTTGTGGGCCCGTGGCTCGGCGCTGGCGGAGACTTGCGGTCGCGAGCATAAC
GAGACGGGGCGGTTAATTGGGACGGCGTTTACGGCGAGGGACATTGTGAGGGTTGCTGAGGCGGTGGATGGGGAT
GGGCTGGTGCGATATTGGGGCTTCTCGTACGGAACGACTCTGGGGGCTACGCTGCTGTCCATGTTCCCGGATAAG
GTCGACAGGGTGATTCTCGATGGGGTGCAGAACCCGCACGAGTATTACAACGCCGACGCCGACTTTGAGGAGTGG
ACCCAGTCAGACGAAGTCTTCTCCGCCATCTTTACCTCCTGCGCCGCAAACCCGCACCGGTGCCGTCTCGCCCGG
CCCCACAAATCCGGTCAGGAGCTAGAGCAAACGGTGTGGACCCTCCTTGAATCACTCCGGGTCCGGCCCCGATCC
TTCCGAAACTCCTCCTTCGTCCTCGATGATGGCACTCTTCGCGGCCTCCTCGCCGACGCCCTCTACTCGACCGCC
AACTGGCCCAACGTCACGACCGTGCTCGACATGCTCATCTCCGGACCGCTGGATGAGACCTTTGTGCTGGACCGT
CTCGGAGAACGGGCTTCGCTCCCGCTGGGCGGCAACACGACCGTCATAGACGAAGCAGAGAAGCGCTTCATGAAG
ATGGCGATGCCCCTATTCGGAATCCACTGCATTGATCGCCGGGCCCGCTCCGGCTCCCTAGACGCCCTGCTCCCG
GCTTTGCATCGGCTACTGAATACAAGCCGCGCCATGGGCGGAGCCGGGGCCAACTCGGCCGTTGCCTGTGCCCAG
TGGAAGCTGGAGCCGGCGGAGCGGTATGCCGGGGACTTCCGGGTGCGACCGCGGGCTCCGGTGCTGATTGTGGGA
AACTCGCACGACGGACATACGCCCATCCGGTCGGCGTTTAATGTCAGTTCGGGCTTTGAGGGGAGTATCGTCCTG
GAAGTTGACGGCTACGGGCACACCTCTCTTGGCCTACCCTCGGCCTGCCTCCTCCGCACCGTCTCCTCCTACTGG
CGAGACGGAAAGCTACCGGCTCCGGGGACCATCTGCCGCGTCGACGCCCCGCCCTTTTCAGCCATCACCTGGGCC
GACATACTGAAGAACGGCACGGGGCTGCAGAAGAGGCATCGTGGCGGCGCGGAGCCGAGGCCGTGGCGTCTGCTG
TAA
Gene >Ophcf2|00012
ATGCTGCTTCTCCTCTCCCTCCTCTCATTCGCCACCGCTAAACCTCTGAAATGGACAACCTGCGCCGACACCTTC
GGCAGTGCCCTCCCGGCCGACTGCTCCCAGCTGGCGGTCCCGCTAGACTACACGAAGCCCGAGACGGGACCGGAC
TTGCAGCTGGATCTCTTCCGGATTCCCGCGGCCACGCAGCCGGCTCAGGGCAGCATCTTGCTCAACTTTGGGGGG
CCAGGGCAGCCGGGGAGGCAGACCTTGGCTATCCTCGGGCCGGTGCTGCAGGCGTGAGTTGTCCCGAGTTAGCTT
GAGACGGGTCGGGTCGTTGGTTGCTGAAAGGGAGAATCGATAGTCTTTCAGGTGGGCGTTTTAACCTAGTAGCCT
TTGATCCACGGTCAGTATCTGTGCCTATACCTACCTAACTATTCAGAGACAGTCTCAGCTGATCCTCGCAGCGGC
ACCGTCAACACACTACCCTTTACCTGCCCGGACGCCATCTTCCGCCACAGAACCTTCTGGCAGGACTCCGTCTAC
CCCGTTCGCGACTCGCCGGCCACGGACGCCGATCTGGGCCAGTTGTGGGCCCGTGGCTCGGCGCTGGCGGAGACT
TGCGGTCGCGAGCATAACGAGACGGGGCGGTTAATTGGGACGGCGTTTACGGCGAGGGACATTGTGAGGGTTGCT
GAGGCGGTGGATGGGGATGGGCTGGTGCGATATTGGGGTGAGTTCCTCGCTTATGACGTTTGAAGTCTGAGATAC
ACAACTCATGTCGTCTCAGGCTTCTCGTACGGAACGACTCTGGGGGCTACGCTGCTGTCCATGTTCCCGGATAAG
GTCGACAGGGTGATTCTCGATGGGGTGCAGAACCCGCACGAGTATTACAACGCCGACGCGTGAGTCTCTCACCCC
TGAATCTCCCCATCCCGGTCTCTTCTAAGACCGAGTCTGTCAGCGACTTTGAGGAGTGGACCCAGTCAGACGAAG
TCTTCTCCGCCATCTTTACCTCCTGCGCCGCAAACCCGCACCGGTGCCGTCTCGCCCGGCCCCACAAATCCGGTC
AGGAGCTAGAGCAAACGGTGTGGACCCTCCTTGAATCACTCCGGGTCCGGCCCCGATCCTTCCGAAACTCCTCCT
TCGTCCTCGATGATGGCACTCTTCGCGGCCTCCTCGCCGACGCCCTCTACTCGACCGCCAACTGGCCCAACGTCA
CGACCGTGCTCGACATGCTCATCTCCGGACCGCTGGATGAGACCTTTGTGCTGGACCGTCTCGGAGAACGGGCTT
CGCTCCCGCTGGGCGGCAACACGACCGTCATAGACGAAGCAGAGAAGCGCTTCATGAAGATGGCGATGCCCCTAT
TCGGAATCCACTGCATTGATCGCCGGGCCCGCTCCGGCTCCCTAGACGCCCTGCTCCCGGCTTTGCATCGGCTAC
TGAATACAAGCCGCGCCATGGGCGGAGCCGGGGCCAACTCGGCCGTTGCCTGTGCCCAGTGGAAGCTGGAGCCGG
CGGAGCGGTATGCCGGGGACTTCCGGGTGCGACCGCGGGCTCCGGTGCTGATTGTGGGAAACTCGCACGACGGAC
ATACGCCCATCCGGTCGGCGTTTAATGTCAGTTCGGGCTTTGAGGGGAGTATCGTCCTGGAAGTTGACGGCTACG
GGGTGTGTACATCTTCCTTCCTCTCCTCTTCTCTCTCTATGCCGCTCTCATCTGCTCATATCCCTCCGTCTCCTT
TCCTTTCTCTACTCTAATCTTCCCCTCTATGTTGCTCTTCATCTCCCTTCTCCCTTTCCCTCTTTTCCTCCCCCT
CTATCCACTCTTGATACAAGCGACTGATCCCCCTCAGCACACCTCTCTTGGCCTACCCTCGGCCTGCCTCCTCCG
CACCGTCTCCTCCTACTGGCGAGACGGAAAGCTACCGGCTCCGGGGACCATCTGCCGCGTCGACGCCCCGCCCTT
TTCAGCCATCACCTGGGCCGACATACTGAAGAACGGCACGGGGCTGCAGAAGAGGCATCGTGGCGGCGCGGAGCC
GAGGCCGTGGCGTCTGCTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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