Protein ID | Ophcf2|00012 |
Gene name | |
Location | scaffold_01:38317..40364 |
Strand | + |
Gene length (bp) | 2047 |
Transcript length (bp) | 1578 |
Coding sequence length (bp) | 1578 |
Protein length (aa) | 526 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08386 | Abhydrolase_4 | TAP-like protein | 1.7E-16 | 387 | 487 |
PF00561 | Abhydrolase_1 | alpha/beta hydrolase fold | 5.6E-11 | 68 | 226 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 14 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophcf2|00012 MLLLLSLLSFATAKPLKWTTCADTFGSALPADCSQLAVPLDYTKPETGPDLQLDLFRIPAATQPAQGSILLNFGG PGQPGRQTLAILGPVLQAGTVNTLPFTCPDAIFRHRTFWQDSVYPVRDSPATDADLGQLWARGSALAETCGREHN ETGRLIGTAFTARDIVRVAEAVDGDGLVRYWGFSYGTTLGATLLSMFPDKVDRVILDGVQNPHEYYNADADFEEW TQSDEVFSAIFTSCAANPHRCRLARPHKSGQELEQTVWTLLESLRVRPRSFRNSSFVLDDGTLRGLLADALYSTA NWPNVTTVLDMLISGPLDETFVLDRLGERASLPLGGNTTVIDEAEKRFMKMAMPLFGIHCIDRRARSGSLDALLP ALHRLLNTSRAMGGAGANSAVACAQWKLEPAERYAGDFRVRPRAPVLIVGNSHDGHTPIRSAFNVSSGFEGSIVL EVDGYGHTSLGLPSACLLRTVSSYWRDGKLPAPGTICRVDAPPFSAITWADILKNGTGLQKRHRGGAEPRPWRLL * |
Coding | >Ophcf2|00012 ATGCTGCTTCTCCTCTCCCTCCTCTCATTCGCCACCGCTAAACCTCTGAAATGGACAACCTGCGCCGACACCTTC GGCAGTGCCCTCCCGGCCGACTGCTCCCAGCTGGCGGTCCCGCTAGACTACACGAAGCCCGAGACGGGACCGGAC TTGCAGCTGGATCTCTTCCGGATTCCCGCGGCCACGCAGCCGGCTCAGGGCAGCATCTTGCTCAACTTTGGGGGG CCAGGGCAGCCGGGGAGGCAGACCTTGGCTATCCTCGGGCCGGTGCTGCAGGCCGGCACCGTCAACACACTACCC TTTACCTGCCCGGACGCCATCTTCCGCCACAGAACCTTCTGGCAGGACTCCGTCTACCCCGTTCGCGACTCGCCG GCCACGGACGCCGATCTGGGCCAGTTGTGGGCCCGTGGCTCGGCGCTGGCGGAGACTTGCGGTCGCGAGCATAAC GAGACGGGGCGGTTAATTGGGACGGCGTTTACGGCGAGGGACATTGTGAGGGTTGCTGAGGCGGTGGATGGGGAT GGGCTGGTGCGATATTGGGGCTTCTCGTACGGAACGACTCTGGGGGCTACGCTGCTGTCCATGTTCCCGGATAAG GTCGACAGGGTGATTCTCGATGGGGTGCAGAACCCGCACGAGTATTACAACGCCGACGCCGACTTTGAGGAGTGG ACCCAGTCAGACGAAGTCTTCTCCGCCATCTTTACCTCCTGCGCCGCAAACCCGCACCGGTGCCGTCTCGCCCGG CCCCACAAATCCGGTCAGGAGCTAGAGCAAACGGTGTGGACCCTCCTTGAATCACTCCGGGTCCGGCCCCGATCC TTCCGAAACTCCTCCTTCGTCCTCGATGATGGCACTCTTCGCGGCCTCCTCGCCGACGCCCTCTACTCGACCGCC AACTGGCCCAACGTCACGACCGTGCTCGACATGCTCATCTCCGGACCGCTGGATGAGACCTTTGTGCTGGACCGT CTCGGAGAACGGGCTTCGCTCCCGCTGGGCGGCAACACGACCGTCATAGACGAAGCAGAGAAGCGCTTCATGAAG ATGGCGATGCCCCTATTCGGAATCCACTGCATTGATCGCCGGGCCCGCTCCGGCTCCCTAGACGCCCTGCTCCCG GCTTTGCATCGGCTACTGAATACAAGCCGCGCCATGGGCGGAGCCGGGGCCAACTCGGCCGTTGCCTGTGCCCAG TGGAAGCTGGAGCCGGCGGAGCGGTATGCCGGGGACTTCCGGGTGCGACCGCGGGCTCCGGTGCTGATTGTGGGA AACTCGCACGACGGACATACGCCCATCCGGTCGGCGTTTAATGTCAGTTCGGGCTTTGAGGGGAGTATCGTCCTG GAAGTTGACGGCTACGGGCACACCTCTCTTGGCCTACCCTCGGCCTGCCTCCTCCGCACCGTCTCCTCCTACTGG CGAGACGGAAAGCTACCGGCTCCGGGGACCATCTGCCGCGTCGACGCCCCGCCCTTTTCAGCCATCACCTGGGCC GACATACTGAAGAACGGCACGGGGCTGCAGAAGAGGCATCGTGGCGGCGCGGAGCCGAGGCCGTGGCGTCTGCTG TAA |
Transcript | >Ophcf2|00012 ATGCTGCTTCTCCTCTCCCTCCTCTCATTCGCCACCGCTAAACCTCTGAAATGGACAACCTGCGCCGACACCTTC GGCAGTGCCCTCCCGGCCGACTGCTCCCAGCTGGCGGTCCCGCTAGACTACACGAAGCCCGAGACGGGACCGGAC TTGCAGCTGGATCTCTTCCGGATTCCCGCGGCCACGCAGCCGGCTCAGGGCAGCATCTTGCTCAACTTTGGGGGG CCAGGGCAGCCGGGGAGGCAGACCTTGGCTATCCTCGGGCCGGTGCTGCAGGCCGGCACCGTCAACACACTACCC TTTACCTGCCCGGACGCCATCTTCCGCCACAGAACCTTCTGGCAGGACTCCGTCTACCCCGTTCGCGACTCGCCG GCCACGGACGCCGATCTGGGCCAGTTGTGGGCCCGTGGCTCGGCGCTGGCGGAGACTTGCGGTCGCGAGCATAAC GAGACGGGGCGGTTAATTGGGACGGCGTTTACGGCGAGGGACATTGTGAGGGTTGCTGAGGCGGTGGATGGGGAT GGGCTGGTGCGATATTGGGGCTTCTCGTACGGAACGACTCTGGGGGCTACGCTGCTGTCCATGTTCCCGGATAAG GTCGACAGGGTGATTCTCGATGGGGTGCAGAACCCGCACGAGTATTACAACGCCGACGCCGACTTTGAGGAGTGG ACCCAGTCAGACGAAGTCTTCTCCGCCATCTTTACCTCCTGCGCCGCAAACCCGCACCGGTGCCGTCTCGCCCGG CCCCACAAATCCGGTCAGGAGCTAGAGCAAACGGTGTGGACCCTCCTTGAATCACTCCGGGTCCGGCCCCGATCC TTCCGAAACTCCTCCTTCGTCCTCGATGATGGCACTCTTCGCGGCCTCCTCGCCGACGCCCTCTACTCGACCGCC AACTGGCCCAACGTCACGACCGTGCTCGACATGCTCATCTCCGGACCGCTGGATGAGACCTTTGTGCTGGACCGT CTCGGAGAACGGGCTTCGCTCCCGCTGGGCGGCAACACGACCGTCATAGACGAAGCAGAGAAGCGCTTCATGAAG ATGGCGATGCCCCTATTCGGAATCCACTGCATTGATCGCCGGGCCCGCTCCGGCTCCCTAGACGCCCTGCTCCCG GCTTTGCATCGGCTACTGAATACAAGCCGCGCCATGGGCGGAGCCGGGGCCAACTCGGCCGTTGCCTGTGCCCAG TGGAAGCTGGAGCCGGCGGAGCGGTATGCCGGGGACTTCCGGGTGCGACCGCGGGCTCCGGTGCTGATTGTGGGA AACTCGCACGACGGACATACGCCCATCCGGTCGGCGTTTAATGTCAGTTCGGGCTTTGAGGGGAGTATCGTCCTG GAAGTTGACGGCTACGGGCACACCTCTCTTGGCCTACCCTCGGCCTGCCTCCTCCGCACCGTCTCCTCCTACTGG CGAGACGGAAAGCTACCGGCTCCGGGGACCATCTGCCGCGTCGACGCCCCGCCCTTTTCAGCCATCACCTGGGCC GACATACTGAAGAACGGCACGGGGCTGCAGAAGAGGCATCGTGGCGGCGCGGAGCCGAGGCCGTGGCGTCTGCTG TAA |
Gene | >Ophcf2|00012 ATGCTGCTTCTCCTCTCCCTCCTCTCATTCGCCACCGCTAAACCTCTGAAATGGACAACCTGCGCCGACACCTTC GGCAGTGCCCTCCCGGCCGACTGCTCCCAGCTGGCGGTCCCGCTAGACTACACGAAGCCCGAGACGGGACCGGAC TTGCAGCTGGATCTCTTCCGGATTCCCGCGGCCACGCAGCCGGCTCAGGGCAGCATCTTGCTCAACTTTGGGGGG CCAGGGCAGCCGGGGAGGCAGACCTTGGCTATCCTCGGGCCGGTGCTGCAGGCGTGAGTTGTCCCGAGTTAGCTT GAGACGGGTCGGGTCGTTGGTTGCTGAAAGGGAGAATCGATAGTCTTTCAGGTGGGCGTTTTAACCTAGTAGCCT TTGATCCACGGTCAGTATCTGTGCCTATACCTACCTAACTATTCAGAGACAGTCTCAGCTGATCCTCGCAGCGGC ACCGTCAACACACTACCCTTTACCTGCCCGGACGCCATCTTCCGCCACAGAACCTTCTGGCAGGACTCCGTCTAC CCCGTTCGCGACTCGCCGGCCACGGACGCCGATCTGGGCCAGTTGTGGGCCCGTGGCTCGGCGCTGGCGGAGACT TGCGGTCGCGAGCATAACGAGACGGGGCGGTTAATTGGGACGGCGTTTACGGCGAGGGACATTGTGAGGGTTGCT GAGGCGGTGGATGGGGATGGGCTGGTGCGATATTGGGGTGAGTTCCTCGCTTATGACGTTTGAAGTCTGAGATAC ACAACTCATGTCGTCTCAGGCTTCTCGTACGGAACGACTCTGGGGGCTACGCTGCTGTCCATGTTCCCGGATAAG GTCGACAGGGTGATTCTCGATGGGGTGCAGAACCCGCACGAGTATTACAACGCCGACGCGTGAGTCTCTCACCCC TGAATCTCCCCATCCCGGTCTCTTCTAAGACCGAGTCTGTCAGCGACTTTGAGGAGTGGACCCAGTCAGACGAAG TCTTCTCCGCCATCTTTACCTCCTGCGCCGCAAACCCGCACCGGTGCCGTCTCGCCCGGCCCCACAAATCCGGTC AGGAGCTAGAGCAAACGGTGTGGACCCTCCTTGAATCACTCCGGGTCCGGCCCCGATCCTTCCGAAACTCCTCCT TCGTCCTCGATGATGGCACTCTTCGCGGCCTCCTCGCCGACGCCCTCTACTCGACCGCCAACTGGCCCAACGTCA CGACCGTGCTCGACATGCTCATCTCCGGACCGCTGGATGAGACCTTTGTGCTGGACCGTCTCGGAGAACGGGCTT CGCTCCCGCTGGGCGGCAACACGACCGTCATAGACGAAGCAGAGAAGCGCTTCATGAAGATGGCGATGCCCCTAT TCGGAATCCACTGCATTGATCGCCGGGCCCGCTCCGGCTCCCTAGACGCCCTGCTCCCGGCTTTGCATCGGCTAC TGAATACAAGCCGCGCCATGGGCGGAGCCGGGGCCAACTCGGCCGTTGCCTGTGCCCAGTGGAAGCTGGAGCCGG CGGAGCGGTATGCCGGGGACTTCCGGGTGCGACCGCGGGCTCCGGTGCTGATTGTGGGAAACTCGCACGACGGAC ATACGCCCATCCGGTCGGCGTTTAATGTCAGTTCGGGCTTTGAGGGGAGTATCGTCCTGGAAGTTGACGGCTACG GGGTGTGTACATCTTCCTTCCTCTCCTCTTCTCTCTCTATGCCGCTCTCATCTGCTCATATCCCTCCGTCTCCTT TCCTTTCTCTACTCTAATCTTCCCCTCTATGTTGCTCTTCATCTCCCTTCTCCCTTTCCCTCTTTTCCTCCCCCT CTATCCACTCTTGATACAAGCGACTGATCCCCCTCAGCACACCTCTCTTGGCCTACCCTCGGCCTGCCTCCTCCG CACCGTCTCCTCCTACTGGCGAGACGGAAAGCTACCGGCTCCGGGGACCATCTGCCGCGTCGACGCCCCGCCCTT TTCAGCCATCACCTGGGCCGACATACTGAAGAACGGCACGGGGCTGCAGAAGAGGCATCGTGGCGGCGCGGAGCC GAGGCCGTGGCGTCTGCTGTAA |