Fungal Genomics

at Utrecht University

PFAM Domain


General information

PFAM domainPF00623
Short nameRNA_pol_Rpb1_2
Long nameRNA polymerase Rpb1, domain 2
Proteins with at least one of this domain3
Total domain count3
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
Ophcf2|02492 PF04997 RNA_pol_Rpb1_1 RNA polymerase Rpb1, domain 1 2.3E-83 19 365
PF00623 RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2 8.2E-71 367 536
PF04983 RNA_pol_Rpb1_3 RNA polymerase Rpb1, domain 3 1.1E-33 539 714
PF05000 RNA_pol_Rpb1_4 RNA polymerase Rpb1, domain 4 8.1E-30 739 845
PF04998 RNA_pol_Rpb1_5 RNA polymerase Rpb1, domain 5 2.1E-77 852 1371
Ophcf2|03360 PF00400 WD40 WD domain, G-beta repeat 7.7E-03 25 52
PF04997 RNA_pol_Rpb1_1 RNA polymerase Rpb1, domain 1 6.5E-109 485 826
PF00623 RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2 6.0E-76 828 993
PF04983 RNA_pol_Rpb1_3 RNA polymerase Rpb1, domain 3 3.6E-44 996 1154
PF05000 RNA_pol_Rpb1_4 RNA polymerase Rpb1, domain 4 2.5E-36 1181 1285
PF04998 RNA_pol_Rpb1_5 RNA polymerase Rpb1, domain 5 6.9E-99 1292 1889
PF04992 RNA_pol_Rpb1_6 RNA polymerase Rpb1, domain 6 1.0E-59 1358 1542
PF04990 RNA_pol_Rpb1_7 RNA polymerase Rpb1, domain 7 3.7E-47 1626 1761
Ophcf2|04276 PF04997 RNA_pol_Rpb1_1 RNA polymerase Rpb1, domain 1 1.6E-15 10 101
PF00623 RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2 4.1E-67 147 325
PF04983 RNA_pol_Rpb1_3 RNA polymerase Rpb1, domain 3 2.8E-33 330 507
PF05000 RNA_pol_Rpb1_4 RNA polymerase Rpb1, domain 4 6.4E-17 588 656
PF04998 RNA_pol_Rpb1_5 RNA polymerase Rpb1, domain 5 7.0E-85 663 1330

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail