© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| PFAM domain | PF00575 |
| Short name | S1 |
| Long name | S1 RNA binding domain |
| Proteins with at least one of this domain | 5 |
| Total domain count | 8 |
| More information | PFAM website |
| Short name | Long name | E-value | Start | End | Name | ||
|---|---|---|---|---|---|---|---|
| protein ID | PFAM | ||||||
| Ophcf2|00963 | PF14632 | SPT6_acidic | Acidic N-terminal SPT6 | 9.5E-22 | 41 | 138 | |
| PF14641 | HTH_44 | Helix-turn-helix DNA-binding domain of SPT6 | 4.3E-36 | 299 | 421 | ||
| PF14639 | YqgF | Holliday-junction resolvase-like of SPT6 | 5.1E-30 | 710 | 865 | ||
| PF14635 | HHH_7 | Helix-hairpin-helix motif | 1.6E-30 | 867 | 976 | ||
| PF17674 | HHH_9 | HHH domain | 3.7E-05 | 985 | 1029 | ||
| PF00575 | S1 | S1 RNA binding domain | 1.6E-04 | 1104 | 1171 | ||
| PF14633 | SH2_2 | SH2 domain | 2.6E-86 | 1191 | 1400 | ||
| Ophcf2|02830 | PF00575 | S1 | S1 RNA binding domain | 7.4E-13 | 14 | 88 | |
| PF07541 | EIF_2_alpha | Eukaryotic translation initiation factor 2 alpha subunit | 1.5E-35 | 126 | 243 | ||
| Ophcf2|04530 | PF03876 | SHS2_Rpb7-N | SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 | 1.4E-13 | 8 | 63 | |
| PF00575 | S1 | S1 RNA binding domain | 5.6E-11 | 77 | 153 | ||
| Ophcf2|05997 | PF00575 | S1 | S1 RNA binding domain | 7.7E-08 | 609 | 679 | |
| PF00575 | S1 | S1 RNA binding domain | 1.8E-08 | 1082 | 1152 | ||
| PF00575 | S1 | S1 RNA binding domain | 4.4E-07 | 1175 | 1238 | ||
| PF00575 | S1 | S1 RNA binding domain | 5.4E-13 | 1265 | 1336 | ||
| Ophcf2|06302 | PF00575 | S1 | S1 RNA binding domain | 8.8E-12 | 210 | 282 | |
| PF00271 | Helicase_C | Helicase conserved C-terminal domain | 1.2E-13 | 715 | 844 | ||
| PF04408 | HA2 | Helicase associated domain (HA2) | 6.2E-22 | 906 | 994 | ||
| PF07717 | OB_NTP_bind | Oligonucleotide/oligosaccharide-binding (OB)-fold | 9.5E-22 | 1052 | 1127 |