Fungal Genomics

at Utrecht University

PFAM Domain


General information

PFAM domainPF00270
Short nameDEAD
Long nameDEAD/DEAH box helicase
Proteins with at least one of this domain44
Total domain count46
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
Ophcf2|00081 PF00270 DEAD DEAD/DEAH box helicase 5.0E-42 94 271
PF04851 ResIII Type III restriction enzyme, res subunit 2.6E-06 106 264
PF00271 Helicase_C Helicase conserved C-terminal domain 4.6E-19 318 425
Ophcf2|00261 PF00270 DEAD DEAD/DEAH box helicase 1.1E-07 296 449
PF00271 Helicase_C Helicase conserved C-terminal domain 4.4E-13 494 620
PF04408 HA2 Helicase associated domain (HA2) 2.1E-21 686 769
PF07717 OB_NTP_bind Oligonucleotide/oligosaccharide-binding (OB)-fold 3.5E-18 828 904
Ophcf2|00288 PF04851 ResIII Type III restriction enzyme, res subunit 5.1E-22 141 297
PF00270 DEAD DEAD/DEAH box helicase 9.9E-17 142 302
PF00271 Helicase_C Helicase conserved C-terminal domain 1.9E-22 498 607
Ophcf2|00359 PF04851 ResIII Type III restriction enzyme, res subunit 1.8E-06 778 950
PF00270 DEAD DEAD/DEAH box helicase 1.3E-21 782 954
PF00271 Helicase_C Helicase conserved C-terminal domain 7.6E-14 994 1100
PF16124 RecQ_Zn_bind RecQ zinc-binding 7.2E-15 1113 1178
PF09382 RQC RQC domain 5.3E-14 1184 1295
Ophcf2|00403 PF00270 DEAD DEAD/DEAH box helicase 3.2E-45 49 213
PF04851 ResIII Type III restriction enzyme, res subunit 4.0E-05 62 208
PF00271 Helicase_C Helicase conserved C-terminal domain 8.0E-31 250 358
Ophcf2|00408 PF00270 DEAD DEAD/DEAH box helicase 1.0E-15 133 306
PF20470 HTH_61 Helix-turn-helix domain 4.7E-24 541 630
Ophcf2|00415 PF00270 DEAD DEAD/DEAH box helicase 2.1E-45 305 511
PF00271 Helicase_C Helicase conserved C-terminal domain 1.9E-26 550 657
PF00133 tRNA-synt_1 tRNA synthetases class I (I, L, M and V) 2.0E-219 851 1472
PF09334 tRNA-synt_1g tRNA synthetases class I (M) 1.3E-04 882 1030
PF13603 tRNA-synt_1_2 Leucyl-tRNA synthetase, Domain 2 3.7E-08 1099 1157
PF08264 Anticodon_1 Anticodon-binding domain of tRNA ligase 3.0E-33 1516 1665
Ophcf2|00549 PF00270 DEAD DEAD/DEAH box helicase 4.9E-43 72 236
PF00271 Helicase_C Helicase conserved C-terminal domain 5.8E-27 273 379
Ophcf2|00593 PF00270 DEAD DEAD/DEAH box helicase 2.1E-47 217 403
PF00271 Helicase_C Helicase conserved C-terminal domain 3.6E-32 438 547
Ophcf2|00898 PF00270 DEAD DEAD/DEAH box helicase 8.0E-11 673 828
PF13401 AAA_22 AAA domain 1.3E-07 679 823
PF00271 Helicase_C Helicase conserved C-terminal domain 2.6E-13 935 1056
PF04408 HA2 Helicase associated domain (HA2) 1.2E-14 1121 1203
PF07717 OB_NTP_bind Oligonucleotide/oligosaccharide-binding (OB)-fold 3.4E-09 1307 1384
Ophcf2|01312 PF00270 DEAD DEAD/DEAH box helicase 1.7E-42 161 348
PF00271 Helicase_C Helicase conserved C-terminal domain 1.7E-25 408 516
Ophcf2|01698 PF00270 DEAD DEAD/DEAH box helicase 5.6E-40 97 267
PF00271 Helicase_C Helicase conserved C-terminal domain 1.3E-29 309 443
Ophcf2|01745 PF00270 DEAD DEAD/DEAH box helicase 3.5E-48 146 315
PF04851 ResIII Type III restriction enzyme, res subunit 3.4E-05 166 309
PF00271 Helicase_C Helicase conserved C-terminal domain 1.5E-25 359 491
Ophcf2|02032 PF00270 DEAD DEAD/DEAH box helicase 6.0E-33 114 278
PF00271 Helicase_C Helicase conserved C-terminal domain 4.9E-25 320 432
Ophcf2|02287 PF00270 DEAD DEAD/DEAH box helicase 1.1E-23 189 408
PF00271 Helicase_C Helicase conserved C-terminal domain 7.3E-25 480 579
Ophcf2|02531 PF00270 DEAD DEAD/DEAH box helicase 3.1E-51 201 372
PF00271 Helicase_C Helicase conserved C-terminal domain 1.2E-29 425 536
Ophcf2|02769 PF00270 DEAD DEAD/DEAH box helicase 3.9E-49 106 270
PF04851 ResIII Type III restriction enzyme, res subunit 1.1E-06 126 267
PF00271 Helicase_C Helicase conserved C-terminal domain 2.9E-24 355 450
PF08147 DBP10CT DBP10CT (NUC160) domain 8.3E-22 737 802
Ophcf2|02968 PF17911 Ski2_N Ski2 N-terminal region 1.9E-34 49 196
PF00270 DEAD DEAD/DEAH box helicase 2.6E-16 300 446
PF00271 Helicase_C Helicase conserved C-terminal domain 4.2E-06 636 742
PF13234 rRNA_proc-arch rRNA-processing arch domain 1.0E-27 800 1074
PF08148 DSHCT DSHCT (NUC185) domain 5.9E-48 1101 1270
Ophcf2|03117 PF00270 DEAD DEAD/DEAH box helicase 4.6E-46 100 271
PF04851 ResIII Type III restriction enzyme, res subunit 3.5E-06 115 263
PF00271 Helicase_C Helicase conserved C-terminal domain 2.3E-24 317 418
PF13959 DUF4217 Domain of unknown function (DUF4217) 4.2E-20 460 520
Ophcf2|03461 PF00270 DEAD DEAD/DEAH box helicase 1.9E-43 126 315
PF00271 Helicase_C Helicase conserved C-terminal domain 4.5E-25 353 466
Ophcf2|03749 PF00270 DEAD DEAD/DEAH box helicase 3.2E-17 160 306
PF00271 Helicase_C Helicase conserved C-terminal domain 7.2E-06 470 557
PF13234 rRNA_proc-arch rRNA-processing arch domain 1.6E-92 611 888
PF08148 DSHCT DSHCT (NUC185) domain 5.0E-48 916 1085
Ophcf2|04017 PF00270 DEAD DEAD/DEAH box helicase 1.4E-41 103 289
PF00271 Helicase_C Helicase conserved C-terminal domain 4.2E-21 353 453
Ophcf2|04102 PF00270 DEAD DEAD/DEAH box helicase 5.9E-40 176 373
PF00271 Helicase_C Helicase conserved C-terminal domain 3.4E-19 481 563
PF13959 DUF4217 Domain of unknown function (DUF4217) 3.8E-15 631 690
Ophcf2|04109 PF04851 ResIII Type III restriction enzyme, res subunit 8.8E-09 272 456
PF00270 DEAD DEAD/DEAH box helicase 1.8E-26 273 459
PF02889 Sec63 Sec63 Brl domain 2.5E-80 784 1087
PF00270 DEAD DEAD/DEAH box helicase 3.9E-19 1133 1294
PF04851 ResIII Type III restriction enzyme, res subunit 2.2E-07 1138 1265
PF00271 Helicase_C Helicase conserved C-terminal domain 2.9E-06 1410 1497
PF02889 Sec63 Sec63 Brl domain 5.8E-46 1625 1881
Ophcf2|04156 PF04851 ResIII Type III restriction enzyme, res subunit 1.6E-24 39 201
PF00270 DEAD DEAD/DEAH box helicase 2.8E-11 44 204
PF00271 Helicase_C Helicase conserved C-terminal domain 1.5E-13 281 378
Ophcf2|04554 PF18149 Helicase_PWI N-terminal helicase PWI domain 4.3E-31 288 400
PF00270 DEAD DEAD/DEAH box helicase 6.6E-27 523 697
PF04851 ResIII Type III restriction enzyme, res subunit 3.6E-14 523 697
PF00271 Helicase_C Helicase conserved C-terminal domain 8.4E-07 814 901
PF02889 Sec63 Sec63 Brl domain 1.1E-92 1023 1330
PF00270 DEAD DEAD/DEAH box helicase 7.4E-18 1374 1539
PF04851 ResIII Type III restriction enzyme, res subunit 7.9E-06 1376 1507
PF02889 Sec63 Sec63 Brl domain 6.7E-64 1859 2175
Ophcf2|04576 PF00270 DEAD DEAD/DEAH box helicase 1.7E-46 42 208
PF04851 ResIII Type III restriction enzyme, res subunit 5.0E-05 62 202
PF00271 Helicase_C Helicase conserved C-terminal domain 2.2E-31 246 353
PF16203 ERCC3_RAD25_C ERCC3/RAD25/XPB C-terminal helicase 4.3E-07 246 355
Ophcf2|04859 PF00270 DEAD DEAD/DEAH box helicase 8.1E-09 604 758
PF00271 Helicase_C Helicase conserved C-terminal domain 3.7E-16 836 960
PF04408 HA2 Helicase associated domain (HA2) 1.4E-14 1024 1110
PF07717 OB_NTP_bind Oligonucleotide/oligosaccharide-binding (OB)-fold 1.0E-14 1180 1281
Ophcf2|04971 PF00270 DEAD DEAD/DEAH box helicase 9.8E-40 110 284
PF00271 Helicase_C Helicase conserved C-terminal domain 1.4E-28 331 436
Ophcf2|04987 PF00270 DEAD DEAD/DEAH box helicase 6.6E-32 316 550
PF04851 ResIII Type III restriction enzyme, res subunit 8.9E-06 321 394
PF00271 Helicase_C Helicase conserved C-terminal domain 4.3E-19 656 755
Ophcf2|05126 PF04851 ResIII Type III restriction enzyme, res subunit 4.0E-14 58 226
PF00270 DEAD DEAD/DEAH box helicase 2.2E-19 61 227
PF00271 Helicase_C Helicase conserved C-terminal domain 1.0E-14 424 529
PF03368 Dicer_dimer Dicer dimerisation domain 4.4E-21 596 686
PF14622 Ribonucleas_3_3 Ribonuclease-III-like 7.6E-11 980 1099
PF00636 Ribonuclease_3 Ribonuclease III domain 3.1E-22 982 1091
PF00636 Ribonuclease_3 Ribonuclease III domain 1.0E-14 1170 1304
Ophcf2|05292 PF00270 DEAD DEAD/DEAH box helicase 1.3E-41 53 215
PF00271 Helicase_C Helicase conserved C-terminal domain 1.8E-32 254 362
Ophcf2|05778 PF00270 DEAD DEAD/DEAH box helicase 2.3E-06 110 256
PF00271 Helicase_C Helicase conserved C-terminal domain 2.6E-10 295 435
PF04408 HA2 Helicase associated domain (HA2) 4.5E-17 498 586
PF07717 OB_NTP_bind Oligonucleotide/oligosaccharide-binding (OB)-fold 5.3E-23 653 728
Ophcf2|05782 PF00270 DEAD DEAD/DEAH box helicase 1.6E-33 36 232
PF00271 Helicase_C Helicase conserved C-terminal domain 3.6E-20 283 392
PF13959 DUF4217 Domain of unknown function (DUF4217) 4.2E-16 442 499
Ophcf2|05858 PF00270 DEAD DEAD/DEAH box helicase 7.2E-08 377 543
PF00271 Helicase_C Helicase conserved C-terminal domain 1.0E-10 679 773
PF04408 HA2 Helicase associated domain (HA2) 1.6E-25 835 952
PF07717 OB_NTP_bind Oligonucleotide/oligosaccharide-binding (OB)-fold 7.0E-11 1019 1123
Ophcf2|06164 PF00270 DEAD DEAD/DEAH box helicase 2.0E-37 10 177
PF04851 ResIII Type III restriction enzyme, res subunit 6.0E-08 25 172
PF00271 Helicase_C Helicase conserved C-terminal domain 3.8E-24 215 323
Ophcf2|06236 PF14617 CMS1 U3-containing 90S pre-ribosomal complex subunit 1.1E-76 9 245
PF00270 DEAD DEAD/DEAH box helicase 5.0E-06 100 204
Ophcf2|06286 PF00106 adh_short short chain dehydrogenase 5.5E-16 56 272
PF01370 Epimerase NAD dependent epimerase/dehydratase family 9.8E-07 58 242
PF08659 KR KR domain 2.0E-06 58 169
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 6.2E-07 64 199
PF04851 ResIII Type III restriction enzyme, res subunit 8.4E-13 466 635
PF00270 DEAD DEAD/DEAH box helicase 1.8E-13 467 635
PF00271 Helicase_C Helicase conserved C-terminal domain 2.2E-16 794 909
PF03368 Dicer_dimer Dicer dimerisation domain 4.2E-20 988 1070
PF00636 Ribonuclease_3 Ribonuclease III domain 5.9E-18 1412 1518
PF14622 Ribonucleas_3_3 Ribonuclease-III-like 6.6E-11 1593 1674
PF00636 Ribonuclease_3 Ribonuclease III domain 4.8E-20 1614 1730
Ophcf2|06324 PF00270 DEAD DEAD/DEAH box helicase 1.1E-45 77 246
PF04851 ResIII Type III restriction enzyme, res subunit 1.2E-07 89 239
PF00271 Helicase_C Helicase conserved C-terminal domain 1.1E-23 283 393
PF13959 DUF4217 Domain of unknown function (DUF4217) 1.1E-23 435 495
Ophcf2|06350 PF04851 ResIII Type III restriction enzyme, res subunit 3.6E-08 67 243
PF00270 DEAD DEAD/DEAH box helicase 2.7E-35 69 244
PF13604 AAA_30 AAA domain 9.6E-07 69 208
Ophcf2|06489 PF04851 ResIII Type III restriction enzyme, res subunit 2.3E-05 220 401
PF00270 DEAD DEAD/DEAH box helicase 8.1E-30 221 434
PF00271 Helicase_C Helicase conserved C-terminal domain 3.3E-18 502 616
Ophcf2|06624 PF00270 DEAD DEAD/DEAH box helicase 1.0E-15 734 895
PF04851 ResIII Type III restriction enzyme, res subunit 1.1E-10 737 894
PF00271 Helicase_C Helicase conserved C-terminal domain 1.6E-07 1245 1316
Ophcf2|07035 PF00270 DEAD DEAD/DEAH box helicase 3.3E-48 269 439
PF00271 Helicase_C Helicase conserved C-terminal domain 5.7E-27 481 585
Ophcf2|07258 PF00270 DEAD DEAD/DEAH box helicase 1.1E-47 632 802
PF00271 Helicase_C Helicase conserved C-terminal domain 3.7E-27 844 953

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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