Fungal Genomics

at Utrecht University

PFAM Domain


General information

PFAM domainPF00240
Short nameubiquitin
Long nameUbiquitin family
Proteins with at least one of this domain9
Total domain count12
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
Ophcf2|00131 PF00240 ubiquitin Ubiquitin family 5.4E-10 22 92
PF11976 Rad60-SLD Ubiquitin-2 like Rad60 SUMO-like 3.8E-20 23 88
Ophcf2|00518 PF00240 ubiquitin Ubiquitin family 2.6E-10 7 74
PF13423 UCH_1 Ubiquitin carboxyl-terminal hydrolase 1.6E-07 109 526
PF00443 UCH Ubiquitin carboxyl-terminal hydrolase 9.4E-48 110 552
Ophcf2|01542 PF11976 Rad60-SLD Ubiquitin-2 like Rad60 SUMO-like 1.6E-15 1 71
PF00240 ubiquitin Ubiquitin family 1.6E-32 3 74
PF14560 Ubiquitin_2 Ubiquitin-like domain 1.0E-03 12 69
PF13881 Rad60-SLD_2 Ubiquitin-2 like Rad60 SUMO-like 1.5E-01 15 71
PF11976 Rad60-SLD Ubiquitin-2 like Rad60 SUMO-like 1.6E-15 77 147
PF00240 ubiquitin Ubiquitin family 1.6E-32 79 150
PF14560 Ubiquitin_2 Ubiquitin-like domain 9.3E-04 87 145
PF13881 Rad60-SLD_2 Ubiquitin-2 like Rad60 SUMO-like 1.4E-01 89 147
PF11976 Rad60-SLD Ubiquitin-2 like Rad60 SUMO-like 1.6E-15 153 223
PF00240 ubiquitin Ubiquitin family 1.6E-32 155 226
PF14560 Ubiquitin_2 Ubiquitin-like domain 9.3E-04 163 221
PF13881 Rad60-SLD_2 Ubiquitin-2 like Rad60 SUMO-like 1.4E-01 165 223
PF11976 Rad60-SLD Ubiquitin-2 like Rad60 SUMO-like 1.6E-15 229 299
PF00240 ubiquitin Ubiquitin family 1.6E-32 231 302
PF14560 Ubiquitin_2 Ubiquitin-like domain 9.3E-04 239 297
PF13881 Rad60-SLD_2 Ubiquitin-2 like Rad60 SUMO-like 1.4E-01 241 299
Ophcf2|02147 PF11976 Rad60-SLD Ubiquitin-2 like Rad60 SUMO-like 3.9E-16 1 71
PF00240 ubiquitin Ubiquitin family 3.8E-33 3 74
PF14560 Ubiquitin_2 Ubiquitin-like domain 2.7E-04 12 69
PF01599 Ribosomal_S27 Ribosomal protein S27a 6.8E-25 102 147
Ophcf2|02690 PF00240 ubiquitin Ubiquitin family 5.2E-21 10 80
PF00627 UBA UBA/TS-N domain 1.5E-05 356 392
Ophcf2|04168 PF00240 ubiquitin Ubiquitin family 1.0E-07 91 154
PF09668 Asp_protease Aspartyl protease 1.1E-59 274 397
PF08284 RVP_2 Retroviral aspartyl protease 7.1E-05 299 406
PF13650 Asp_protease_2 Aspartyl protease 1.0E-10 300 387
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 8.2E-23 300 391
PF00627 UBA UBA/TS-N domain 2.2E-06 493 526
Ophcf2|04244 PF11976 Rad60-SLD Ubiquitin-2 like Rad60 SUMO-like 3.6E-16 23 93
PF00240 ubiquitin Ubiquitin family 3.5E-33 25 96
PF14560 Ubiquitin_2 Ubiquitin-like domain 2.0E-04 32 91
PF01020 Ribosomal_L40e Ribosomal L40e family 7.6E-31 100 149
Ophcf2|06519 PF11976 Rad60-SLD Ubiquitin-2 like Rad60 SUMO-like 1.8E-08 1 64
PF00240 ubiquitin Ubiquitin family 3.9E-19 3 73
PF00627 UBA UBA/TS-N domain 3.6E-11 140 174
PF09280 XPC-binding XPC-binding domain 1.0E-24 258 313
PF00627 UBA UBA/TS-N domain 2.2E-13 333 368
Ophcf2|07326 PF11976 Rad60-SLD Ubiquitin-2 like Rad60 SUMO-like 8.0E-13 2 71
PF00240 ubiquitin Ubiquitin family 2.1E-23 3 74

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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