© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|993 |
| Gene name | |
| Location | Contig_127:6494..7802 |
| Strand | + |
| Gene length (bp) | 1308 |
| Transcript length (bp) | 1158 |
| Coding sequence length (bp) | 1158 |
| Protein length (aa) | 386 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03839 | Sec62 | Translocation protein Sec62 | 3.9E-63 | 125 | 311 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q99161|SEC62_YARLI | Translocation protein SEC62 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SEC62 PE=3 SV=2 | 97 | 315 | 9.0E-61 |
| sp|O13787|SEC62_SCHPO | Translocation protein sec62 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec62 PE=3 SV=1 | 100 | 383 | 2.0E-53 |
| sp|Q5AI21|SEC62_CANAL | Translocation protein SEC62 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEC62 PE=3 SV=1 | 84 | 358 | 3.0E-32 |
| sp|Q6CLZ9|SEC62_KLULA | Translocation protein SEC62 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SEC62 PE=3 SV=1 | 96 | 331 | 1.0E-30 |
| sp|P21825|SEC62_YEAST | Translocation protein SEC62 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC62 PE=1 SV=2 | 100 | 312 | 9.0E-27 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q99161|SEC62_YARLI | Translocation protein SEC62 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SEC62 PE=3 SV=2 | 97 | 315 | 9.0E-61 |
| sp|O13787|SEC62_SCHPO | Translocation protein sec62 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec62 PE=3 SV=1 | 100 | 383 | 2.0E-53 |
| sp|Q5AI21|SEC62_CANAL | Translocation protein SEC62 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEC62 PE=3 SV=1 | 84 | 358 | 3.0E-32 |
| sp|Q6CLZ9|SEC62_KLULA | Translocation protein SEC62 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SEC62 PE=3 SV=1 | 96 | 331 | 1.0E-30 |
| sp|P21825|SEC62_YEAST | Translocation protein SEC62 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC62 PE=1 SV=2 | 100 | 312 | 9.0E-27 |
| sp|Q6FRU9|SEC62_CANGA | Translocation protein SEC62 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SEC62 PE=3 SV=1 | 100 | 312 | 8.0E-25 |
| sp|Q6BI99|SEC62_DEBHA | Translocation protein SEC62 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=SEC62 PE=3 SV=1 | 100 | 312 | 3.0E-21 |
| sp|Q8BU14|SEC62_MOUSE | Translocation protein SEC62 OS=Mus musculus GN=Sec62 PE=1 SV=1 | 213 | 326 | 9.0E-19 |
| sp|Q5R4Q3|SEC62_PONAB | Translocation protein SEC62 OS=Pongo abelii GN=SEC62 PE=2 SV=1 | 213 | 326 | 1.0E-18 |
| sp|Q99442|SEC62_HUMAN | Translocation protein SEC62 OS=Homo sapiens GN=SEC62 PE=1 SV=1 | 213 | 359 | 2.0E-18 |
| sp|Q5F3A1|SEC62_CHICK | Translocation protein SEC62 OS=Gallus gallus GN=SEC62 PE=2 SV=1 | 213 | 381 | 6.0E-17 |
| sp|Q75D26|SEC62_ASHGO | Translocation protein SEC62 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEC62 PE=3 SV=2 | 103 | 313 | 3.0E-16 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0030176 | integral component of endoplasmic reticulum membrane | Yes |
| GO:0015031 | protein transport | Yes |
| GO:0051641 | cellular localization | No |
| GO:0070727 | cellular macromolecule localization | No |
| GO:0051179 | localization | No |
| GO:0051234 | establishment of localization | No |
| GO:0071702 | organic substance transport | No |
| GO:0031300 | intrinsic component of organelle membrane | No |
| GO:0016021 | integral component of membrane | No |
| GO:0008150 | biological_process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0071705 | nitrogen compound transport | No |
| GO:0008104 | protein localization | No |
| GO:0045184 | establishment of protein localization | No |
| GO:0009987 | cellular process | No |
| GO:0005575 | cellular_component | No |
| GO:0031227 | intrinsic component of endoplasmic reticulum membrane | No |
| GO:0031301 | integral component of organelle membrane | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0033036 | macromolecule localization | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 226 | 248 | 22 |
| 2 | 255 | 277 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|993 MSGQSPPGGMQRPSPEQIAEIQRRVAEDAQRAGMTVPEFIEHIKKQAAEQQRMRMMQQQQQQHGHGHNHDHSHDH DHDHAHQHPQAQQQPITPGPPNPKAIAVAKFLKGQDLKPRTCILNGERKDMFKVKRALRALQSPAYQKARKRNPL LPEITDRASIENTFKLLPLSMLALRVSKVEPQVGTNGKKPKRVKGQWTVRIEQQQEAQDDMYYAWLWEGSQVKRQ LYAALALVVIFAIVLYPLWPLKLRQGVYYLSWGLLCLLGLFFLMAIFRVILFCFTYFVVPPGLWLYPNLWEDVSF MDSFRPVWAWHESAEEKKAKKKAKKKARATATSSGNVRNPVLAAATGQMAPTTATTTGTDTQIQTGDLHQRSYMA PKVEELADDE* |
| Coding | >OphauG2|993 ATGTCGGGCCAATCACCCCCAGGAGGCATGCAGCGCCCCTCCCCCGAGCAGATTGCCGAAATCCAACGCAGAGTG GCCGAAGATGCTCAAAGGGCTGGCATGACGGTGCCCGAGTTCATTGAGCATATCAAGAAGCAGGCAGCCGAGCAG CAGCGGATGCGCATGATGCAGCAGCAGCAGCAGCAACATGGCCATGGCCATAACCACGATCACAGCCACGACCAC GATCATGACCACGCCCATCAACATCCGCAAGCCCAGCAGCAGCCCATTACGCCTGGCCCGCCAAATCCAAAGGCC ATTGCAGTCGCCAAGTTTCTCAAGGGCCAAGACCTTAAGCCCCGGACCTGTATCCTAAACGGCGAGCGCAAAGAC ATGTTCAAAGTCAAGAGAGCCTTGCGAGCCTTGCAGTCCCCTGCTTACCAAAAAGCCCGCAAGAGAAATCCATTG CTGCCTGAAATTACGGATCGGGCCTCCATCGAAAACACGTTTAAACTGCTTCCCCTCAGCATGCTCGCCCTACGC GTGTCCAAAGTCGAGCCCCAGGTGGGTACAAATGGCAAGAAGCCTAAGCGCGTCAAGGGACAGTGGACCGTCCGC ATAGAGCAGCAACAAGAGGCCCAAGACGACATGTATTACGCCTGGCTCTGGGAGGGCAGCCAGGTTAAACGCCAA CTCTACGCCGCACTTGCTCTCGTCGTCATCTTTGCCATTGTGCTCTATCCGCTGTGGCCGCTCAAGCTTCGTCAA GGAGTATACTATCTCAGCTGGGGCCTGCTCTGCCTCTTGGGCCTCTTCTTCCTCATGGCCATCTTTCGCGTCATT CTGTTCTGTTTCACATATTTCGTAGTTCCACCTGGCTTGTGGCTCTACCCTAATTTGTGGGAGGATGTATCCTTC ATGGACAGTTTTAGGCCAGTATGGGCCTGGCACGAATCGGCCGAGGAAAAGAAGGCCAAGAAGAAGGCCAAGAAG AAGGCTAGAGCAACGGCTACATCCTCCGGTAACGTTAGAAATCCCGTCTTGGCCGCTGCCACGGGTCAAATGGCT CCGACCACTGCCACGACGACGGGTACCGACACTCAGATCCAAACGGGTGATTTGCACCAACGAAGCTACATGGCA CCAAAAGTGGAGGAGTTGGCTGATGACGAGTAA |
| Transcript | >OphauG2|993 ATGTCGGGCCAATCACCCCCAGGAGGCATGCAGCGCCCCTCCCCCGAGCAGATTGCCGAAATCCAACGCAGAGTG GCCGAAGATGCTCAAAGGGCTGGCATGACGGTGCCCGAGTTCATTGAGCATATCAAGAAGCAGGCAGCCGAGCAG CAGCGGATGCGCATGATGCAGCAGCAGCAGCAGCAACATGGCCATGGCCATAACCACGATCACAGCCACGACCAC GATCATGACCACGCCCATCAACATCCGCAAGCCCAGCAGCAGCCCATTACGCCTGGCCCGCCAAATCCAAAGGCC ATTGCAGTCGCCAAGTTTCTCAAGGGCCAAGACCTTAAGCCCCGGACCTGTATCCTAAACGGCGAGCGCAAAGAC ATGTTCAAAGTCAAGAGAGCCTTGCGAGCCTTGCAGTCCCCTGCTTACCAAAAAGCCCGCAAGAGAAATCCATTG CTGCCTGAAATTACGGATCGGGCCTCCATCGAAAACACGTTTAAACTGCTTCCCCTCAGCATGCTCGCCCTACGC GTGTCCAAAGTCGAGCCCCAGGTGGGTACAAATGGCAAGAAGCCTAAGCGCGTCAAGGGACAGTGGACCGTCCGC ATAGAGCAGCAACAAGAGGCCCAAGACGACATGTATTACGCCTGGCTCTGGGAGGGCAGCCAGGTTAAACGCCAA CTCTACGCCGCACTTGCTCTCGTCGTCATCTTTGCCATTGTGCTCTATCCGCTGTGGCCGCTCAAGCTTCGTCAA GGAGTATACTATCTCAGCTGGGGCCTGCTCTGCCTCTTGGGCCTCTTCTTCCTCATGGCCATCTTTCGCGTCATT CTGTTCTGTTTCACATATTTCGTAGTTCCACCTGGCTTGTGGCTCTACCCTAATTTGTGGGAGGATGTATCCTTC ATGGACAGTTTTAGGCCAGTATGGGCCTGGCACGAATCGGCCGAGGAAAAGAAGGCCAAGAAGAAGGCCAAGAAG AAGGCTAGAGCAACGGCTACATCCTCCGGTAACGTTAGAAATCCCGTCTTGGCCGCTGCCACGGGTCAAATGGCT CCGACCACTGCCACGACGACGGGTACCGACACTCAGATCCAAACGGGTGATTTGCACCAACGAAGCTACATGGCA CCAAAAGTGGAGGAGTTGGCTGATGACGAGTAA |
| Gene | >OphauG2|993 ATGTCGGGCCAATCACCCCCAGGAGGCATGCAGCGCCCCTCCCCCGAGCAGATTGCCGAAATCCAACGCAGAGTG GCCGAAGATGCTCAAAGGGCTGGCATGACGGTGCCCGAGTTCATTGAGCATATCAAGAAGCAGGCAGCCGAGCAG CAGCGGATGCGCATGATGCAGCAGCAGCAGCAGCAACATGGCCATGGCCATAACCACGATCACAGCCACGACCAC GATCATGACCACGCCCATCAACATCCGCAAGCCCAGCAGCAGCCCATTACGCCTGGCCCGCCAAATCCAAAGGCC ATTGCAGTCGCCAAGTTTCTCAAGGGCCAAGACCTTAAGCCCCGGACCTGTATCCTAAACGGCGAGCGCAAAGAC ATGTTCAAAGGCAAGTCGCCCGGGCCGCTGTTGCATGGCATATCAATCAGCTAATCTGGTGCCTGATGTCTTCAG TCAAGAGAGCCTTGCGAGCCTTGCAGTCCCCTGCTTACCAAAAAGCCCGCAAGAGAAATCCATTGCTGCCTGAAA TTACGGATCGGGCCTCCATCGAAAACACGTTTAAACTGCTTCCCCTCAGCATGCTCGCCCTACGCGTGTCCAAAG TCGAGCCCCAGGTGGGTACAAATGGCAAGAAGCCTAAGCGCGTCAAGGGACAGTGGACCGTCCGCATAGAGCAGC AACAAGAGGCCCAAGACGACATGTATTACGCCTGGCTCTGGGAGGGCAGCCAGGTTAAACGCCAACTCTACGCCG CACTTGCTCTCGTCGTCATCTTTGCCATTGTGCTCTATCCGCTGTGGCCGCTCAAGCTTCGTCAAGGAGTATACT ATCTCAGCTGGGGCCTGCTCTGCCTCTTGGGCCTCTTCTTCCTCATGGCCATCTTTCGCGTCATTCTGTTCTGTT TCACATATTTCGTAGTTCCACCTGGCTTGTGGCTCTACCCTAATTTGTGGGAGGATGTATCCTTCATGGACAGTT TTAGGCCAGTATGGGCCTGGCACGAAGTGAGTGGTTTTGCTCTTTTTTTGTGGCCCTGGTATTGTGACCAAACTT GCCTTGGGCAAATAATGGCTGATTCTTCATTGTTAGTCGGCCGAGGAAAAGAAGGCCAAGAAGAAGGCCAAGAAG AAGGCTAGAGCAACGGCTACATCCTCCGGTAACGTTAGAAATCCCGTCTTGGCCGCTGCCACGGGTCAAATGGCT CCGACCACTGCCACGACGACGGGTACCGACACTCAGATCCAAACGGGTGATTTGCACCAACGAAGCTACATGGCA CCAAAAGTGGAGGAGTTGGCTGATGACGAGTAA |