Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|937
Gene name
LocationContig_125:10774..11931
Strand+
Gene length (bp)1157
Transcript length (bp)1095
Coding sequence length (bp)1095
Protein length (aa) 365

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF16543 DFRP_C DRG Family Regulatory Proteins, Tma46 2.4E-26 239 321
PF00642 zf-CCCH Zinc finger C-x8-C-x5-C-x3-H type (and similar) 1.1E-05 99 123

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q12000|TMA46_YEAST Translation machinery-associated protein 46 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TMA46 PE=1 SV=2 1 329 6.0E-80
sp|Q8WU90|ZC3HF_HUMAN Zinc finger CCCH domain-containing protein 15 OS=Homo sapiens GN=ZC3H15 PE=1 SV=1 1 314 9.0E-69
sp|Q6U6G5|ZC3HF_RAT Zinc finger CCCH domain-containing protein 15 OS=Rattus norvegicus GN=Zc3h15 PE=1 SV=1 1 314 2.0E-68
sp|Q3TIV5|ZC3HF_MOUSE Zinc finger CCCH domain-containing protein 15 OS=Mus musculus GN=Zc3h15 PE=1 SV=2 1 314 2.0E-68
sp|Q1RMM1|ZC3HF_BOVIN Zinc finger CCCH domain-containing protein 15 OS=Bos taurus GN=ZC3H15 PE=2 SV=1 1 298 7.0E-67
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Swissprot ID Swissprot Description Start End E-value
sp|Q12000|TMA46_YEAST Translation machinery-associated protein 46 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TMA46 PE=1 SV=2 1 329 6.0E-80
sp|Q8WU90|ZC3HF_HUMAN Zinc finger CCCH domain-containing protein 15 OS=Homo sapiens GN=ZC3H15 PE=1 SV=1 1 314 9.0E-69
sp|Q6U6G5|ZC3HF_RAT Zinc finger CCCH domain-containing protein 15 OS=Rattus norvegicus GN=Zc3h15 PE=1 SV=1 1 314 2.0E-68
sp|Q3TIV5|ZC3HF_MOUSE Zinc finger CCCH domain-containing protein 15 OS=Mus musculus GN=Zc3h15 PE=1 SV=2 1 314 2.0E-68
sp|Q1RMM1|ZC3HF_BOVIN Zinc finger CCCH domain-containing protein 15 OS=Bos taurus GN=ZC3H15 PE=2 SV=1 1 298 7.0E-67
sp|Q803J8|ZC3HF_DANRE Zinc finger CCCH domain-containing protein 15 OS=Danio rerio GN=zc3h15 PE=2 SV=1 26 298 4.0E-65
sp|Q6DD06|ZC3HF_XENLA Zinc finger CCCH domain-containing protein 15 OS=Xenopus laevis GN=zc3h15 PE=2 SV=1 26 298 1.0E-64
sp|Q5H7N8|ZC3HF_CHICK Zinc finger CCCH domain-containing protein 15 OS=Gallus gallus GN=ZC3H15 PE=1 SV=1 1 298 1.0E-63
sp|Q9SK74|C3H21_ARATH Zinc finger CCCH domain-containing protein 21 OS=Arabidopsis thaliana GN=At2g20280 PE=3 SV=1 1 297 2.0E-63
sp|A4IGY3|ZC3HF_XENTR Zinc finger CCCH domain-containing protein 15 OS=Xenopus tropicalis GN=zc3h15 PE=2 SV=1 1 298 4.0E-63
sp|Q93618|ZC3HF_CAEEL Zinc finger CCCH domain-containing protein 15 homolog OS=Caenorhabditis elegans GN=F27D4.4 PE=3 SV=3 1 294 5.0E-60
sp|Q28Y69|ZC3HF_DROPS Zinc finger CCCH domain-containing protein 15 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA21225 PE=3 SV=1 1 298 3.0E-58
sp|A8WMM4|ZC3HF_CAEBR Zinc finger CCCH domain-containing protein 15 homolog OS=Caenorhabditis briggsae GN=CBG00292 PE=3 SV=2 1 294 6.0E-58
sp|Q0JHZ2|C3H11_ORYSJ Zinc finger CCCH domain-containing protein 11 OS=Oryza sativa subsp. japonica GN=Os01g0834700 PE=2 SV=2 1 294 6.0E-58
sp|Q7JWR9|ZC3HF_DROME Zinc finger CCCH domain-containing protein 15 homolog OS=Drosophila melanogaster GN=CG8635 PE=1 SV=1 1 298 8.0E-58
sp|Q54DA5|ZC3HF_DICDI Zinc finger CCCH domain-containing protein 15 homolog OS=Dictyostelium discoideum GN=DDB_G0292410 PE=3 SV=1 27 283 7.0E-51
sp|Q9USV4|MEP33_SCHPO mRNA export protein 33 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mep33 PE=2 SV=1 1 327 5.0E-37
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GO

GO Term Description Terminal node
GO:0046872 metal ion binding Yes
GO:0003674 molecular_function No
GO:0043169 cation binding No
GO:0005488 binding No
GO:0043167 ion binding No

SignalP

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SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|937
MPPKKNDKGGGGGKKPSATKLVEDRTFGMKNKKGGAAQKQIAQMTSNLKSGGSAEDKRKAAEKAAREREKKAAED
AKREAAELLNRPAQIQKVPFGVDPKTVVCIFYKKGDCEKGKKCKFSHDLSIERKTEKKNLYSDSRQGEEEEDNKK
KQETSADWDEEQLRQVVLSKKGNQRSTTEKVCKFFIAAIEDGKYGWFWVCPNGGDKCMYRHALPPGFVLKTKEQR
AAEKALMDKSPLKTLTLEDFLESERHKLTGNLTPVTPETFAKWKKERLDKKSAEEQARRAKDNTGRALFESGKWR
DEEESDEEDSEDDTWNLAKLRRETEAVRQKKEDERLAASHGIDNSDSLTETEVVAETEAASSGV*
Coding >OphauG2|937
ATGCCTCCCAAGAAGAACGACAAGGGTGGTGGCGGCGGCAAGAAGCCGTCTGCCACAAAACTTGTCGAGGACCGC
ACGTTTGGTATGAAAAACAAGAAAGGAGGAGCTGCACAGAAGCAAATTGCTCAGATGACGTCCAATCTGAAATCT
GGAGGCAGCGCGGAAGATAAACGCAAAGCGGCCGAGAAGGCGGCGCGAGAACGGGAGAAGAAGGCAGCAGAAGAC
GCAAAGAGGGAAGCAGCAGAACTTCTCAACAGACCTGCTCAAATACAAAAAGTTCCATTTGGCGTTGACCCCAAA
ACGGTAGTTTGCATTTTTTACAAAAAAGGCGACTGTGAAAAGGGCAAGAAGTGCAAGTTCTCGCACGATCTTTCC
ATTGAACGCAAAACGGAAAAGAAAAATTTGTATTCGGACTCAAGACAGGGCGAGGAGGAGGAAGACAACAAGAAG
AAACAAGAGACCTCAGCAGATTGGGATGAGGAACAATTGCGTCAAGTTGTGCTATCCAAGAAAGGCAATCAACGA
TCAACGACAGAGAAGGTTTGCAAATTCTTCATTGCGGCCATTGAAGATGGAAAATATGGCTGGTTCTGGGTCTGT
CCCAACGGCGGAGACAAGTGCATGTATAGACATGCTCTACCCCCTGGTTTCGTTCTCAAGACCAAGGAGCAAAGA
GCAGCGGAAAAGGCACTCATGGATAAGTCACCACTTAAGACACTGACTCTTGAAGATTTCCTGGAATCGGAACGG
CACAAATTGACGGGAAACTTGACACCAGTCACGCCCGAAACATTCGCAAAATGGAAGAAAGAGAGGCTCGACAAG
AAGTCGGCCGAGGAGCAGGCTCGCCGGGCAAAAGACAACACTGGACGAGCGCTTTTTGAGAGCGGCAAGTGGCGC
GATGAAGAGGAGTCAGACGAAGAGGATTCTGAAGACGATACATGGAATCTTGCAAAGCTTAGAAGAGAGACGGAG
GCAGTCCGTCAAAAGAAGGAGGATGAACGATTAGCGGCAAGCCATGGTATCGACAACTCAGATTCGTTGACAGAA
ACTGAGGTTGTGGCTGAGACGGAAGCTGCGAGCAGTGGAGTTTGA
Transcript >OphauG2|937
ATGCCTCCCAAGAAGAACGACAAGGGTGGTGGCGGCGGCAAGAAGCCGTCTGCCACAAAACTTGTCGAGGACCGC
ACGTTTGGTATGAAAAACAAGAAAGGAGGAGCTGCACAGAAGCAAATTGCTCAGATGACGTCCAATCTGAAATCT
GGAGGCAGCGCGGAAGATAAACGCAAAGCGGCCGAGAAGGCGGCGCGAGAACGGGAGAAGAAGGCAGCAGAAGAC
GCAAAGAGGGAAGCAGCAGAACTTCTCAACAGACCTGCTCAAATACAAAAAGTTCCATTTGGCGTTGACCCCAAA
ACGGTAGTTTGCATTTTTTACAAAAAAGGCGACTGTGAAAAGGGCAAGAAGTGCAAGTTCTCGCACGATCTTTCC
ATTGAACGCAAAACGGAAAAGAAAAATTTGTATTCGGACTCAAGACAGGGCGAGGAGGAGGAAGACAACAAGAAG
AAACAAGAGACCTCAGCAGATTGGGATGAGGAACAATTGCGTCAAGTTGTGCTATCCAAGAAAGGCAATCAACGA
TCAACGACAGAGAAGGTTTGCAAATTCTTCATTGCGGCCATTGAAGATGGAAAATATGGCTGGTTCTGGGTCTGT
CCCAACGGCGGAGACAAGTGCATGTATAGACATGCTCTACCCCCTGGTTTCGTTCTCAAGACCAAGGAGCAAAGA
GCAGCGGAAAAGGCACTCATGGATAAGTCACCACTTAAGACACTGACTCTTGAAGATTTCCTGGAATCGGAACGG
CACAAATTGACGGGAAACTTGACACCAGTCACGCCCGAAACATTCGCAAAATGGAAGAAAGAGAGGCTCGACAAG
AAGTCGGCCGAGGAGCAGGCTCGCCGGGCAAAAGACAACACTGGACGAGCGCTTTTTGAGAGCGGCAAGTGGCGC
GATGAAGAGGAGTCAGACGAAGAGGATTCTGAAGACGATACATGGAATCTTGCAAAGCTTAGAAGAGAGACGGAG
GCAGTCCGTCAAAAGAAGGAGGATGAACGATTAGCGGCAAGCCATGGTATCGACAACTCAGATTCGTTGACAGAA
ACTGAGGTTGTGGCTGAGACGGAAGCTGCGAGCAGTGGAGTTTGA
Gene >OphauG2|937
ATGCCTCCCAAGAAGAACGACAAGGGTGGTGGCGGCGGCAAGAAGCCGTCTGCCACAAAACTTGTCGAGGACCGC
ACGTTTGGTATGAAAAACAAGAAAGGAGGAGCTGCACAGAAGCAAATTGCTCAGATGACGTCCAATCTGAAATCT
GGAGGCAGCGCGGAAGATAAACGCAAAGCGGCCGAGAAGGCGGCGCGAGAACGGGAGAAGAAGGCAGCAGAAGAC
GCAAAGAGGGAAGCAGCAGAACTTCTCAACAGACCTGCTCAAATACAAAAAGTTCCATTTGGCGTTGACCCCAAA
ACGGTAGTTTGCATTTTTTACAAAAAAGGCGACTGTGAAAAGGGCAAGAAGTGCAAGTTCTCGCACGATCTTTCC
ATTGAACGCAAAACGGAAAAGAAAAATTTGTATTCGGACTCAAGACAGGGCGAGGAGGAGGAAGACAACAAGAAG
AAACAAGAGACCTCAGCAGATTGGGATGAGGAACAATTGCGTCAAGTTGTGCTATCCAAGAAAGGCAATCAACGA
TCAACGACAGAGAAGGTTTGCAAATTCTTCATTGCGGCCATTGAAGATGGAAAATATGGCTGGTTCTGGGTCTGT
CCCAACGGCGGAGACAAGTGCATGTATAGACATGCTCTACCCCCTGGGTATGTCATGGAAGGCACGCCATGTGTT
TACAAAGAGCCTCAATTGCTGATTGAATGCCTAGTTTCGTTCTCAAGACCAAGGAGCAAAGAGCAGCGGAAAAGG
CACTCATGGATAAGTCACCACTTAAGACACTGACTCTTGAAGATTTCCTGGAATCGGAACGGCACAAATTGACGG
GAAACTTGACACCAGTCACGCCCGAAACATTCGCAAAATGGAAGAAAGAGAGGCTCGACAAGAAGTCGGCCGAGG
AGCAGGCTCGCCGGGCAAAAGACAACACTGGACGAGCGCTTTTTGAGAGCGGCAAGTGGCGCGATGAAGAGGAGT
CAGACGAAGAGGATTCTGAAGACGATACATGGAATCTTGCAAAGCTTAGAAGAGAGACGGAGGCAGTCCGTCAAA
AGAAGGAGGATGAACGATTAGCGGCAAGCCATGGTATCGACAACTCAGATTCGTTGACAGAAACTGAGGTTGTGG
CTGAGACGGAAGCTGCGAGCAGTGGAGTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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