Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|925
Gene name
LocationContig_1244:55..740
Strand+
Gene length (bp)685
Transcript length (bp)474
Coding sequence length (bp)474
Protein length (aa) 158

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF16015 Promethin Promethin 9.0E-25 38 120

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 43 0.5

Transmembrane Domains

Domain # Start End Length
1 44 66 22
2 70 92 22
3 94 116 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|925
MSLPKQRNDEAPTQQLRETAYNLKNAVQHRAAGVRSLAQDSFDCSFIVSQLIFCFLPLLLFAAFSASTVLLALGA
AVVFSLFWIAVALLVLVPVLLVASSVALIVWVWAVASFLLARWLYAHAPVGVSGGLELDAAGRKFNVVKDERGID
GNIVQKS*
Coding >OphauG2|925
ATGTCTTTGCCCAAGCAGCGCAACGACGAGGCGCCCACGCAGCAGCTGCGCGAGACGGCGTACAATCTCAAGAAT
GCGGTGCAGCATCGCGCTGCGGGGGTGCGGTCGCTGGCCCAGGACTCGTTTGATTGCTCCTTCATCGTCTCCCAG
CTCATCTTTTGCTTCCTCCCGCTTCTTCTCTTTGCCGCCTTTTCCGCTTCCACCGTCCTCCTCGCCCTTGGCGCT
GCCGTCGTCTTTTCGCTCTTTTGGATCGCCGTTGCCCTGCTTGTCCTCGTCCCTGTCCTCCTCGTCGCCTCGTCC
GTCGCCCTTATTGTTTGGGTCTGGGCCGTCGCTAGCTTCCTCCTTGCGCGCTGGCTCTATGCCCATGCCCCCGTC
GGCGTCTCTGGCGGTCTCGAGCTGGACGCTGCTGGCCGCAAGTTCAATGTCGTCAAGGATGAGCGCGGCATCGAC
GGCAACATTGTGCAAAAGTCCTAA
Transcript >OphauG2|925
ATGTCTTTGCCCAAGCAGCGCAACGACGAGGCGCCCACGCAGCAGCTGCGCGAGACGGCGTACAATCTCAAGAAT
GCGGTGCAGCATCGCGCTGCGGGGGTGCGGTCGCTGGCCCAGGACTCGTTTGATTGCTCCTTCATCGTCTCCCAG
CTCATCTTTTGCTTCCTCCCGCTTCTTCTCTTTGCCGCCTTTTCCGCTTCCACCGTCCTCCTCGCCCTTGGCGCT
GCCGTCGTCTTTTCGCTCTTTTGGATCGCCGTTGCCCTGCTTGTCCTCGTCCCTGTCCTCCTCGTCGCCTCGTCC
GTCGCCCTTATTGTTTGGGTCTGGGCCGTCGCTAGCTTCCTCCTTGCGCGCTGGCTCTATGCCCATGCCCCCGTC
GGCGTCTCTGGCGGTCTCGAGCTGGACGCTGCTGGCCGCAAGTTCAATGTCGTCAAGGATGAGCGCGGCATCGAC
GGCAACATTGTGCAAAAGTCCTAA
Gene >OphauG2|925
ATGTCTTTGCCCAAGCAGCGCAACGACGAGGCGCCCACGCAGCAGCTGCGCGAGACGGCGTACAATCTCAAGAAT
GCGGTGCAGCATCGCGCTGCGGGGGTGCGGTCGCTGGCCCAGGACTCGTTTGATTGCGTCGTGCCGCCAAGNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTTATAAAAAAAACTAAAAAAAAACTGCGTCTTTACATCCC
TCCTGGGCCTAAAAATACAACACTGCTAATCTCTGCTTCCCAGTCCTTCATCGTCTCCCAGCTCATCTTTTGCTT
CCTCCCGCTTCTTCTCTTTGCCGCCTTTTCCGCTTCCACCGTCCTCCTCGCCCTTGGCGCTGCCGTCGTCTTTTC
GCTCTTTTGGATCGCCGTTGCCCTGCTTGTCCTCGTCCCTGTCCTCCTCGTCGCCTCGTCCGTCGCCCTTATTGT
TTGGGTCTGGGCCGTCGCTAGCTTCCTCCTTGCGCGCTGGCTCTATGCCCATGCCCCCGTCGGCGTCTCTGGCGG
TCTCGAGCTGGACGCTGCTGGCCGCAAGTTCAATGTCGTCAAGGATGAGCGCGGCATCGACGGCAACATTGTGCA
AAAGTCCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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