Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|92
Gene name
LocationContig_1003:116..834
Strand-
Gene length (bp)718
Transcript length (bp)600
Coding sequence length (bp)600
Protein length (aa) 200

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01391 Collagen Collagen triple helix repeat (20 copies) 3.4E-08 52 104

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|92
MKTAGVVTSVLATSVAVVLAAPAGLPDKVAFVCTPVGLDQVGGALPGGSAGGIAGPAGPAGPAGQAGADGAAGMD
GAAGMNGAAGPAGMNGQNGMNGLNGAPGSGTNNIFNGGAGGAGGAGGVGNGGAGGVGNGGSANVDSRIDNSNNNS
NSATGGSSNGGVNVGGSSNEVVNAILNGTISANSTSPYKTPVSPNGDAG*
Coding >OphauG2|92
ATGAAGACCGCTGGCGTTGTCACTTCAGTCCTGGCGACTTCGGTTGCCGTTGTCCTTGCTGCTCCGGCTGGCCTC
CCTGACAAGGTGGCCTTTGTCTGCACTCCTGTTGGCCTTGACCAGGTTGGCGGTGCCCTCCCTGGCGGTTCTGCT
GGCGGCATTGCTGGTCCCGCCGGTCCCGCCGGCCCTGCCGGTCAGGCCGGTGCGGATGGCGCGGCTGGCATGGAC
GGCGCTGCTGGCATGAACGGTGCTGCCGGACCTGCTGGCATGAACGGCCAGAACGGCATGAACGGCCTCAACGGC
GCTCCTGGAAGCGGAACCAACAACATCTTCAACGGCGGAGCTGGCGGCGCTGGCGGTGCCGGCGGCGTTGGCAAT
GGCGGCGCTGGCGGAGTTGGCAACGGCGGCTCGGCCAACGTCGACTCCAGGATCGACAACTCCAACAACAACTCC
AACTCGGCCACGGGCGGCTCCAGCAACGGCGGCGTCAATGTCGGCGGCTCGTCCAACGAGGTTGTCAATGCCATC
CTCAACGGCACCATCTCTGCCAACTCCACCAGCCCCTACAAGACGCCCGTCAGCCCCAACGGCGATGCCGGCTGA
Transcript >OphauG2|92
ATGAAGACCGCTGGCGTTGTCACTTCAGTCCTGGCGACTTCGGTTGCCGTTGTCCTTGCTGCTCCGGCTGGCCTC
CCTGACAAGGTGGCCTTTGTCTGCACTCCTGTTGGCCTTGACCAGGTTGGCGGTGCCCTCCCTGGCGGTTCTGCT
GGCGGCATTGCTGGTCCCGCCGGTCCCGCCGGCCCTGCCGGTCAGGCCGGTGCGGATGGCGCGGCTGGCATGGAC
GGCGCTGCTGGCATGAACGGTGCTGCCGGACCTGCTGGCATGAACGGCCAGAACGGCATGAACGGCCTCAACGGC
GCTCCTGGAAGCGGAACCAACAACATCTTCAACGGCGGAGCTGGCGGCGCTGGCGGTGCCGGCGGCGTTGGCAAT
GGCGGCGCTGGCGGAGTTGGCAACGGCGGCTCGGCCAACGTCGACTCCAGGATCGACAACTCCAACAACAACTCC
AACTCGGCCACGGGCGGCTCCAGCAACGGCGGCGTCAATGTCGGCGGCTCGTCCAACGAGGTTGTCAATGCCATC
CTCAACGGCACCATCTCTGCCAACTCCACCAGCCCCTACAAGACGCCCGTCAGCCCCAACGGCGATGCCGGCTGA
Gene >OphauG2|92
ATGAAGACCGCTGGCGTTGTCACTTCAGTCCTGGCGACTTCGGTTGCCGTTGTCCTTGCTGCTCCGGCTGGCCTC
CCTGACAAGGTGGCCTTTGTCTGCAGTGAGTATCTGCCCCTCGGCATTTTATTATTATGATTATTTTTTGCGTGC
TCCAGTGCTAACAGACGGGAATAGCTCCTGTTGGCCTTGACCAGGTTGGCGGTGCCCTCCCTGGCGGTTCTGCTG
GCGGCATTGCTGGTCCCGCCGGTCCCGCCGGCCCTGCCGGTCAGGCCGGTGCGGATGGCGCGGCTGGCATGGACG
GCGCTGCTGGCATGAACGGTGCTGCCGGACCTGCTGGCATGAACGGCCAGAACGGCATGAACGGCCTCAACGGCG
CTCCTGGAAGCGGAACCAACAACATCTTCAACGGCGGAGCTGGCGGCGCTGGCGGTGCCGGCGGCGTTGGCAATG
GCGGCGCTGGCGGAGTTGGCAACGGCGGCTCGGCCAACGTCGACTCCAGGATCGACAACTCCAACAACAACTCCA
ACTCGGCCACGGGCGGCTCCAGCAACGGCGGCGTCAATGTCGGCGGCTCGTCCAACGAGGTTGTCAATGCCATCC
TCAACGGCACCATCTCTGCCAACTCCACCAGCCCCTACAAGACGCCCGTCAGCCCCAACGGCGGTGCCATGGGAA
GCGCCAAGCTGCCCGTCAACGGCGCCACCAAGATGCCGGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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