Protein ID | OphauG2|92 |
Gene name | |
Location | Contig_1003:116..834 |
Strand | - |
Gene length (bp) | 718 |
Transcript length (bp) | 600 |
Coding sequence length (bp) | 600 |
Protein length (aa) | 200 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01391 | Collagen | Collagen triple helix repeat (20 copies) | 3.4E-08 | 52 | 104 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 21 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauG2|92 MKTAGVVTSVLATSVAVVLAAPAGLPDKVAFVCTPVGLDQVGGALPGGSAGGIAGPAGPAGPAGQAGADGAAGMD GAAGMNGAAGPAGMNGQNGMNGLNGAPGSGTNNIFNGGAGGAGGAGGVGNGGAGGVGNGGSANVDSRIDNSNNNS NSATGGSSNGGVNVGGSSNEVVNAILNGTISANSTSPYKTPVSPNGDAG* |
Coding | >OphauG2|92 ATGAAGACCGCTGGCGTTGTCACTTCAGTCCTGGCGACTTCGGTTGCCGTTGTCCTTGCTGCTCCGGCTGGCCTC CCTGACAAGGTGGCCTTTGTCTGCACTCCTGTTGGCCTTGACCAGGTTGGCGGTGCCCTCCCTGGCGGTTCTGCT GGCGGCATTGCTGGTCCCGCCGGTCCCGCCGGCCCTGCCGGTCAGGCCGGTGCGGATGGCGCGGCTGGCATGGAC GGCGCTGCTGGCATGAACGGTGCTGCCGGACCTGCTGGCATGAACGGCCAGAACGGCATGAACGGCCTCAACGGC GCTCCTGGAAGCGGAACCAACAACATCTTCAACGGCGGAGCTGGCGGCGCTGGCGGTGCCGGCGGCGTTGGCAAT GGCGGCGCTGGCGGAGTTGGCAACGGCGGCTCGGCCAACGTCGACTCCAGGATCGACAACTCCAACAACAACTCC AACTCGGCCACGGGCGGCTCCAGCAACGGCGGCGTCAATGTCGGCGGCTCGTCCAACGAGGTTGTCAATGCCATC CTCAACGGCACCATCTCTGCCAACTCCACCAGCCCCTACAAGACGCCCGTCAGCCCCAACGGCGATGCCGGCTGA |
Transcript | >OphauG2|92 ATGAAGACCGCTGGCGTTGTCACTTCAGTCCTGGCGACTTCGGTTGCCGTTGTCCTTGCTGCTCCGGCTGGCCTC CCTGACAAGGTGGCCTTTGTCTGCACTCCTGTTGGCCTTGACCAGGTTGGCGGTGCCCTCCCTGGCGGTTCTGCT GGCGGCATTGCTGGTCCCGCCGGTCCCGCCGGCCCTGCCGGTCAGGCCGGTGCGGATGGCGCGGCTGGCATGGAC GGCGCTGCTGGCATGAACGGTGCTGCCGGACCTGCTGGCATGAACGGCCAGAACGGCATGAACGGCCTCAACGGC GCTCCTGGAAGCGGAACCAACAACATCTTCAACGGCGGAGCTGGCGGCGCTGGCGGTGCCGGCGGCGTTGGCAAT GGCGGCGCTGGCGGAGTTGGCAACGGCGGCTCGGCCAACGTCGACTCCAGGATCGACAACTCCAACAACAACTCC AACTCGGCCACGGGCGGCTCCAGCAACGGCGGCGTCAATGTCGGCGGCTCGTCCAACGAGGTTGTCAATGCCATC CTCAACGGCACCATCTCTGCCAACTCCACCAGCCCCTACAAGACGCCCGTCAGCCCCAACGGCGATGCCGGCTGA |
Gene | >OphauG2|92 ATGAAGACCGCTGGCGTTGTCACTTCAGTCCTGGCGACTTCGGTTGCCGTTGTCCTTGCTGCTCCGGCTGGCCTC CCTGACAAGGTGGCCTTTGTCTGCAGTGAGTATCTGCCCCTCGGCATTTTATTATTATGATTATTTTTTGCGTGC TCCAGTGCTAACAGACGGGAATAGCTCCTGTTGGCCTTGACCAGGTTGGCGGTGCCCTCCCTGGCGGTTCTGCTG GCGGCATTGCTGGTCCCGCCGGTCCCGCCGGCCCTGCCGGTCAGGCCGGTGCGGATGGCGCGGCTGGCATGGACG GCGCTGCTGGCATGAACGGTGCTGCCGGACCTGCTGGCATGAACGGCCAGAACGGCATGAACGGCCTCAACGGCG CTCCTGGAAGCGGAACCAACAACATCTTCAACGGCGGAGCTGGCGGCGCTGGCGGTGCCGGCGGCGTTGGCAATG GCGGCGCTGGCGGAGTTGGCAACGGCGGCTCGGCCAACGTCGACTCCAGGATCGACAACTCCAACAACAACTCCA ACTCGGCCACGGGCGGCTCCAGCAACGGCGGCGTCAATGTCGGCGGCTCGTCCAACGAGGTTGTCAATGCCATCC TCAACGGCACCATCTCTGCCAACTCCACCAGCCCCTACAAGACGCCCGTCAGCCCCAACGGCGGTGCCATGGGAA GCGCCAAGCTGCCCGTCAACGGCGCCACCAAGATGCCGGCTGA |