Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|882
Gene name
LocationContig_1230:101..444
Strand-
Gene length (bp)343
Transcript length (bp)201
Coding sequence length (bp)201
Protein length (aa) 67

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00646 F-box F-box domain 3.6E-06 9 43

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup714
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2421
Ophiocordyceps australis 1348a (Ghana) OphauG2|882 (this protein)
Ophiocordyceps australis map64 (Brazil) OphauB2|3723
Ophiocordyceps camponoti-floridani Ophcf2|03033
Ophiocordyceps camponoti-rufipedis Ophun1|7238
Ophiocordyceps kimflemingae Ophio5|823
Ophiocordyceps subramaniannii Hirsu2|158

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|882
MARYNILDVLSPEIINLILEQLRALDLAFVLTLRLVCKRFNDFATPASYRLIQLNERILTTWICRV*
Coding >OphauG2|882
ATGGCTCGCTACAATATTCTAGATGTGCTATCTCCCGAGATCATCAATCTCATTTTGGAACAGCTACGAGCCCTT
GATCTAGCTTTTGTCTTGACCCTGCGTTTAGTCTGTAAAAGGTTCAACGACTTTGCTACACCCGCGAGCTACCGA
CTGATTCAACTCAATGAGCGCATCCTAACGACCTGGATTTGCCGAGTGTAG
Transcript >OphauG2|882
ATGGCTCGCTACAATATTCTAGATGTGCTATCTCCCGAGATCATCAATCTCATTTTGGAACAGCTACGAGCCCTT
GATCTAGCTTTTGTCTTGACCCTGCGTTTAGTCTGTAAAAGGTTCAACGACTTTGCTACACCCGCGAGCTACCGA
CTGATTCAACTCAATGAGCGCATCCTAACGACCTGGATTTGCCGAGTGTAG
Gene >OphauG2|882
ATGGCTCGCTACAATATTCTAGATGTGCTATCTCCCGAGATCATCAATCTCATTTTGGAACAGGTGAGTCACTGC
CTCGTCGTGTAACCCCCTTTTCAACTCGTCCGTTTCAGATATTGACAGCTCCAGCTACGAGCCCTTGATCTAGCT
TTTGTCTTGACCCTGCGTTTAGTCTGTAAAAGGTTCAACGACTTTGCTACACCCGCGAGCTACCGACTGATTCAA
CTCAATGAGCGCATCCTAAGTCCGACGGCAGACCAGGTGTATCCTCATGCCCTGCAGCATATTTCGCAACACACG
AATCACGTGTCTGTGCGCAGCGACCTGGATTTGCCGAGTGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail