Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|87
Gene name
Location	Contig_1000:5369..6272
Strand	-
Gene length (bp)	903
Transcript length (bp)	903
Coding sequence length (bp)	903
Protein length (aa)	301

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05368	NmrA	NmrA-like family	5.2E-23	8	221
PF13460	NAD_binding_10	NAD(P)H-binding	2.3E-17	12	195

Swissprot hits

[Show all]

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P52577\|IFRH_ARATH	Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=2 SV=1	1	153	3.0E-08
sp\|P52580\|IFRH_MAIZE	Isoflavone reductase homolog IRL OS=Zea mays GN=IRL PE=2 SV=1	1	238	4.0E-08
sp\|P52579\|IFRH_TOBAC	Isoflavone reductase homolog A622 OS=Nicotiana tabacum PE=2 SV=1	8	205	2.0E-06
sp\|B5KRH5\|PILR1_LINCY	Bifunctional pinoresinol-lariciresinol reductase OS=Linum corymbulosum GN=PLR_Lc1 PE=1 SV=1	7	186	2.0E-06
sp\|Q4R0I0\|PILR1_LINAL	Bifunctional pinoresinol-lariciresinol reductase OS=Linum album GN=PLR1 PE=1 SV=1	7	186	3.0E-06

[Show all]

[Show less]

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P52577\|IFRH_ARATH	Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=2 SV=1	1	153	3.0E-08
sp\|P52580\|IFRH_MAIZE	Isoflavone reductase homolog IRL OS=Zea mays GN=IRL PE=2 SV=1	1	238	4.0E-08
sp\|P52579\|IFRH_TOBAC	Isoflavone reductase homolog A622 OS=Nicotiana tabacum PE=2 SV=1	8	205	2.0E-06
sp\|B5KRH5\|PILR1_LINCY	Bifunctional pinoresinol-lariciresinol reductase OS=Linum corymbulosum GN=PLR_Lc1 PE=1 SV=1	7	186	2.0E-06
sp\|Q4R0I0\|PILR1_LINAL	Bifunctional pinoresinol-lariciresinol reductase OS=Linum album GN=PLR1 PE=1 SV=1	7	186	3.0E-06
sp\|Q15GI3\|IGS1_PETHY	Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 PE=1 SV=1	48	174	6.0E-06

[Show less]

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 24	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|87 MSAPLKNVAITGASGNLGSVILAKLAASPNLDVRVVRRTDSSSTFPPGTHVVDADFDSVDSLAAALQGQDALVAP LNSMAVGLQNNLVEACIRAGVQRFIPSEFGSDLDNPNARALPAFVPKVQFQDFIQQRAKTTTLTYTFVANGPFLD YGLEHGFLMRLSNSKPVIFDGGDSLFSATTLDSIADAVLGILAHPQETKNRTVRIEDIKISQNKLLELAKQVAPD RPWEPEHASLDQVVNKATERLAQGIMDFDTYVAFLYRAIFDPAYGSNFAKTDNALLGVKGKSEEDVAAILKSVLK *
Coding	>OphauG2\|87 ATGTCGGCGCCTTTAAAGAACGTGGCTATTACTGGAGCCTCTGGAAATCTCGGCTCCGTCATCCTAGCCAAGCTT GCCGCCTCACCCAACCTCGACGTCCGCGTCGTGCGCCGCACTGATTCATCCTCCACCTTTCCGCCCGGCACTCAT GTTGTCGATGCCGACTTTGACTCGGTAGACTCGCTTGCCGCTGCTCTCCAGGGCCAGGATGCTCTAGTGGCCCCC CTGAATTCAATGGCCGTTGGCCTTCAAAACAACTTGGTTGAAGCCTGCATCAGGGCTGGTGTCCAGCGCTTCATT CCTTCCGAGTTTGGCTCTGATCTCGATAACCCAAACGCACGTGCTTTGCCCGCCTTTGTCCCCAAGGTTCAGTTC CAAGACTTTATTCAACAGAGGGCCAAGACGACCACTCTGACTTACACCTTTGTCGCCAATGGACCATTTCTCGAC TATGGCCTAGAGCACGGCTTTCTCATGCGCCTCTCCAACAGCAAGCCAGTCATTTTCGATGGCGGCGACAGCCTC TTTAGCGCCACCACGCTTGACAGCATTGCCGATGCCGTGCTTGGTATCCTAGCCCACCCACAAGAGACCAAGAAC CGCACTGTCCGCATTGAGGATATCAAGATTAGCCAGAACAAGCTGCTAGAGTTGGCAAAGCAAGTGGCGCCTGAC AGGCCATGGGAGCCTGAGCACGCCAGCCTCGACCAAGTTGTCAACAAGGCAACCGAGCGCCTCGCACAGGGCATC ATGGACTTTGACACATATGTGGCCTTTTTATACCGCGCCATCTTCGACCCTGCCTATGGCAGCAATTTTGCCAAG ACGGATAACGCCCTGCTGGGCGTCAAGGGCAAGTCTGAAGAGGATGTTGCCGCCATTCTAAAGTCGGTTCTGAAA TAG
Transcript	>OphauG2\|87 ATGTCGGCGCCTTTAAAGAACGTGGCTATTACTGGAGCCTCTGGAAATCTCGGCTCCGTCATCCTAGCCAAGCTT GCCGCCTCACCCAACCTCGACGTCCGCGTCGTGCGCCGCACTGATTCATCCTCCACCTTTCCGCCCGGCACTCAT GTTGTCGATGCCGACTTTGACTCGGTAGACTCGCTTGCCGCTGCTCTCCAGGGCCAGGATGCTCTAGTGGCCCCC CTGAATTCAATGGCCGTTGGCCTTCAAAACAACTTGGTTGAAGCCTGCATCAGGGCTGGTGTCCAGCGCTTCATT CCTTCCGAGTTTGGCTCTGATCTCGATAACCCAAACGCACGTGCTTTGCCCGCCTTTGTCCCCAAGGTTCAGTTC CAAGACTTTATTCAACAGAGGGCCAAGACGACCACTCTGACTTACACCTTTGTCGCCAATGGACCATTTCTCGAC TATGGCCTAGAGCACGGCTTTCTCATGCGCCTCTCCAACAGCAAGCCAGTCATTTTCGATGGCGGCGACAGCCTC TTTAGCGCCACCACGCTTGACAGCATTGCCGATGCCGTGCTTGGTATCCTAGCCCACCCACAAGAGACCAAGAAC CGCACTGTCCGCATTGAGGATATCAAGATTAGCCAGAACAAGCTGCTAGAGTTGGCAAAGCAAGTGGCGCCTGAC AGGCCATGGGAGCCTGAGCACGCCAGCCTCGACCAAGTTGTCAACAAGGCAACCGAGCGCCTCGCACAGGGCATC ATGGACTTTGACACATATGTGGCCTTTTTATACCGCGCCATCTTCGACCCTGCCTATGGCAGCAATTTTGCCAAG ACGGATAACGCCCTGCTGGGCGTCAAGGGCAAGTCTGAAGAGGATGTTGCCGCCATTCTAAAGTCGGTTCTGAAA TAG
Gene	>OphauG2\|87 ATGTCGGCGCCTTTAAAGAACGTGGCTATTACTGGAGCCTCTGGAAATCTCGGCTCCGTCATCCTAGCCAAGCTT GCCGCCTCACCCAACCTCGACGTCCGCGTCGTGCGCCGCACTGATTCATCCTCCACCTTTCCGCCCGGCACTCAT GTTGTCGATGCCGACTTTGACTCGGTAGACTCGCTTGCCGCTGCTCTCCAGGGCCAGGATGCTCTAGTGGCCCCC CTGAATTCAATGGCCGTTGGCCTTCAAAACAACTTGGTTGAAGCCTGCATCAGGGCTGGTGTCCAGCGCTTCATT CCTTCCGAGTTTGGCTCTGATCTCGATAACCCAAACGCACGTGCTTTGCCCGCCTTTGTCCCCAAGGTTCAGTTC CAAGACTTTATTCAACAGAGGGCCAAGACGACCACTCTGACTTACACCTTTGTCGCCAATGGACCATTTCTCGAC TATGGCCTAGAGCACGGCTTTCTCATGCGCCTCTCCAACAGCAAGCCAGTCATTTTCGATGGCGGCGACAGCCTC TTTAGCGCCACCACGCTTGACAGCATTGCCGATGCCGTGCTTGGTATCCTAGCCCACCCACAAGAGACCAAGAAC CGCACTGTCCGCATTGAGGATATCAAGATTAGCCAGAACAAGCTGCTAGAGTTGGCAAAGCAAGTGGCGCCTGAC AGGCCATGGGAGCCTGAGCACGCCAGCCTCGACCAAGTTGTCAACAAGGCAACCGAGCGCCTCGCACAGGGCATC ATGGACTTTGACACATATGTGGCCTTTTTATACCGCGCCATCTTCGACCCTGCCTATGGCAGCAATTTTGCCAAG ACGGATAACGCCCTGCTGGGCGTCAAGGGCAAGTCTGAAGAGGATGTTGCCGCCATTCTAAAGTCGGTTCTGAAA TAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail