Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|861
Gene name
LocationContig_1224:2402..3359
Strand+
Gene length (bp)957
Transcript length (bp)957
Coding sequence length (bp)957
Protein length (aa) 319

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13639 zf-RING_2 Ring finger domain 2.9E-08 23 74
PF00097 zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 7.7E-06 24 73

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0046872 metal ion binding Yes
GO:0003674 molecular_function No
GO:0043169 cation binding No
GO:0005488 binding No
GO:0043167 ion binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 43 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|861
MQQSPCADSTSTGPVQETPAERQCVICFQAITKPCFLKPCGHDEFHHHCIGRWLQYEYSESERSRSLARCPICRA
SIIDIAATPCQVGQGKQNSHITSLDHVPSRRVNHTSRSRRSTWFRTHDAELRRRQRWTRRESASLDFRRAVYSYS
LYSLHMGSNPLSGYREVSRQRFETEMQLQNRARAFLRRDLRAFSWLTTPDMDQDSVWPANSSPTGAQRPRLALEK
LVSHIMRLLLVFEIRGSDGHLEDHLVTHLGRANARLFIHELHSFLRSPCHRVEDWDRMVRYDTGAMAAPRQPIRH
TVMTALGQGAPSTSNPGP*
Coding >OphauG2|861
ATGCAACAGTCTCCATGTGCCGACAGCACTTCTACGGGCCCGGTACAAGAGACGCCGGCTGAGCGACAATGCGTC
ATTTGCTTCCAAGCCATTACCAAACCATGCTTCTTGAAACCATGCGGTCACGATGAATTCCACCACCACTGCATT
GGCCGCTGGCTGCAGTACGAATATTCGGAATCGGAACGCTCGCGCTCTCTTGCCCGATGCCCCATATGCAGAGCG
AGCATCATCGACATTGCTGCGACCCCATGCCAAGTTGGACAAGGGAAACAAAACTCGCACATCACGTCACTTGAC
CATGTTCCATCACGGCGTGTAAACCATACCTCCCGCTCTCGACGTTCGACGTGGTTCAGGACCCATGATGCCGAG
CTCCGACGGCGTCAACGCTGGACCCGGAGAGAGAGCGCAAGTCTAGACTTTCGACGCGCCGTCTATTCTTACTCG
CTATACTCGCTGCACATGGGCTCGAATCCTCTCTCTGGATACCGTGAAGTTTCAAGACAGCGGTTTGAGACTGAG
ATGCAGCTCCAGAATCGGGCGCGGGCTTTTCTTCGACGCGACCTGCGCGCCTTTAGCTGGCTGACGACTCCAGAC
ATGGATCAAGATTCTGTTTGGCCCGCGAATTCAAGCCCCACTGGCGCACAACGCCCCAGGCTGGCCCTGGAAAAG
CTAGTGAGCCATATCATGCGGCTGCTGCTCGTATTTGAAATCCGCGGTAGTGACGGTCACCTGGAAGACCATCTG
GTAACACATCTTGGGCGCGCCAATGCAAGACTTTTCATACACGAATTACATTCATTTCTCCGAAGTCCTTGCCAC
AGGGTGGAAGATTGGGACCGCATGGTGCGATACGACACTGGTGCGATGGCGGCTCCAAGGCAGCCAATTCGTCAC
ACCGTCATGACTGCCCTAGGCCAAGGGGCACCCTCGACGAGCAATCCTGGTCCATGA
Transcript >OphauG2|861
ATGCAACAGTCTCCATGTGCCGACAGCACTTCTACGGGCCCGGTACAAGAGACGCCGGCTGAGCGACAATGCGTC
ATTTGCTTCCAAGCCATTACCAAACCATGCTTCTTGAAACCATGCGGTCACGATGAATTCCACCACCACTGCATT
GGCCGCTGGCTGCAGTACGAATATTCGGAATCGGAACGCTCGCGCTCTCTTGCCCGATGCCCCATATGCAGAGCG
AGCATCATCGACATTGCTGCGACCCCATGCCAAGTTGGACAAGGGAAACAAAACTCGCACATCACGTCACTTGAC
CATGTTCCATCACGGCGTGTAAACCATACCTCCCGCTCTCGACGTTCGACGTGGTTCAGGACCCATGATGCCGAG
CTCCGACGGCGTCAACGCTGGACCCGGAGAGAGAGCGCAAGTCTAGACTTTCGACGCGCCGTCTATTCTTACTCG
CTATACTCGCTGCACATGGGCTCGAATCCTCTCTCTGGATACCGTGAAGTTTCAAGACAGCGGTTTGAGACTGAG
ATGCAGCTCCAGAATCGGGCGCGGGCTTTTCTTCGACGCGACCTGCGCGCCTTTAGCTGGCTGACGACTCCAGAC
ATGGATCAAGATTCTGTTTGGCCCGCGAATTCAAGCCCCACTGGCGCACAACGCCCCAGGCTGGCCCTGGAAAAG
CTAGTGAGCCATATCATGCGGCTGCTGCTCGTATTTGAAATCCGCGGTAGTGACGGTCACCTGGAAGACCATCTG
GTAACACATCTTGGGCGCGCCAATGCAAGACTTTTCATACACGAATTACATTCATTTCTCCGAAGTCCTTGCCAC
AGGGTGGAAGATTGGGACCGCATGGTGCGATACGACACTGGTGCGATGGCGGCTCCAAGGCAGCCAATTCGTCAC
ACCGTCATGACTGCCCTAGGCCAAGGGGCACCCTCGACGAGCAATCCTGGTCCATGA
Gene >OphauG2|861
ATGCAACAGTCTCCATGTGCCGACAGCACTTCTACGGGCCCGGTACAAGAGACGCCGGCTGAGCGACAATGCGTC
ATTTGCTTCCAAGCCATTACCAAACCATGCTTCTTGAAACCATGCGGTCACGATGAATTCCACCACCACTGCATT
GGCCGCTGGCTGCAGTACGAATATTCGGAATCGGAACGCTCGCGCTCTCTTGCCCGATGCCCCATATGCAGAGCG
AGCATCATCGACATTGCTGCGACCCCATGCCAAGTTGGACAAGGGAAACAAAACTCGCACATCACGTCACTTGAC
CATGTTCCATCACGGCGTGTAAACCATACCTCCCGCTCTCGACGTTCGACGTGGTTCAGGACCCATGATGCCGAG
CTCCGACGGCGTCAACGCTGGACCCGGAGAGAGAGCGCAAGTCTAGACTTTCGACGCGCCGTCTATTCTTACTCG
CTATACTCGCTGCACATGGGCTCGAATCCTCTCTCTGGATACCGTGAAGTTTCAAGACAGCGGTTTGAGACTGAG
ATGCAGCTCCAGAATCGGGCGCGGGCTTTTCTTCGACGCGACCTGCGCGCCTTTAGCTGGCTGACGACTCCAGAC
ATGGATCAAGATTCTGTTTGGCCCGCGAATTCAAGCCCCACTGGCGCACAACGCCCCAGGCTGGCCCTGGAAAAG
CTAGTGAGCCATATCATGCGGCTGCTGCTCGTATTTGAAATCCGCGGTAGTGACGGTCACCTGGAAGACCATCTG
GTAACACATCTTGGGCGCGCCAATGCAAGACTTTTCATACACGAATTACATTCATTTCTCCGAAGTCCTTGCCAC
AGGGTGGAAGATTGGGACCGCATGGTGCGATACGACACTGGTGCGATGGCGGCTCCAAGGCAGCCAATTCGTCAC
ACCGTCATGACTGCCCTAGGCCAAGGGGCACCCTCGACGAGCAATCCTGGTCCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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