© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|861 |
| Gene name | |
| Location | Contig_1224:2402..3359 |
| Strand | + |
| Gene length (bp) | 957 |
| Transcript length (bp) | 957 |
| Coding sequence length (bp) | 957 |
| Protein length (aa) | 319 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13639 | zf-RING_2 | Ring finger domain | 2.9E-08 | 23 | 74 |
| PF00097 | zf-C3HC4 | Zinc finger, C3HC4 type (RING finger) | 7.7E-06 | 24 | 73 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0046872 | metal ion binding | Yes |
| GO:0003674 | molecular_function | No |
| GO:0043169 | cation binding | No |
| GO:0005488 | binding | No |
| GO:0043167 | ion binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 43 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|861 MQQSPCADSTSTGPVQETPAERQCVICFQAITKPCFLKPCGHDEFHHHCIGRWLQYEYSESERSRSLARCPICRA SIIDIAATPCQVGQGKQNSHITSLDHVPSRRVNHTSRSRRSTWFRTHDAELRRRQRWTRRESASLDFRRAVYSYS LYSLHMGSNPLSGYREVSRQRFETEMQLQNRARAFLRRDLRAFSWLTTPDMDQDSVWPANSSPTGAQRPRLALEK LVSHIMRLLLVFEIRGSDGHLEDHLVTHLGRANARLFIHELHSFLRSPCHRVEDWDRMVRYDTGAMAAPRQPIRH TVMTALGQGAPSTSNPGP* |
| Coding | >OphauG2|861 ATGCAACAGTCTCCATGTGCCGACAGCACTTCTACGGGCCCGGTACAAGAGACGCCGGCTGAGCGACAATGCGTC ATTTGCTTCCAAGCCATTACCAAACCATGCTTCTTGAAACCATGCGGTCACGATGAATTCCACCACCACTGCATT GGCCGCTGGCTGCAGTACGAATATTCGGAATCGGAACGCTCGCGCTCTCTTGCCCGATGCCCCATATGCAGAGCG AGCATCATCGACATTGCTGCGACCCCATGCCAAGTTGGACAAGGGAAACAAAACTCGCACATCACGTCACTTGAC CATGTTCCATCACGGCGTGTAAACCATACCTCCCGCTCTCGACGTTCGACGTGGTTCAGGACCCATGATGCCGAG CTCCGACGGCGTCAACGCTGGACCCGGAGAGAGAGCGCAAGTCTAGACTTTCGACGCGCCGTCTATTCTTACTCG CTATACTCGCTGCACATGGGCTCGAATCCTCTCTCTGGATACCGTGAAGTTTCAAGACAGCGGTTTGAGACTGAG ATGCAGCTCCAGAATCGGGCGCGGGCTTTTCTTCGACGCGACCTGCGCGCCTTTAGCTGGCTGACGACTCCAGAC ATGGATCAAGATTCTGTTTGGCCCGCGAATTCAAGCCCCACTGGCGCACAACGCCCCAGGCTGGCCCTGGAAAAG CTAGTGAGCCATATCATGCGGCTGCTGCTCGTATTTGAAATCCGCGGTAGTGACGGTCACCTGGAAGACCATCTG GTAACACATCTTGGGCGCGCCAATGCAAGACTTTTCATACACGAATTACATTCATTTCTCCGAAGTCCTTGCCAC AGGGTGGAAGATTGGGACCGCATGGTGCGATACGACACTGGTGCGATGGCGGCTCCAAGGCAGCCAATTCGTCAC ACCGTCATGACTGCCCTAGGCCAAGGGGCACCCTCGACGAGCAATCCTGGTCCATGA |
| Transcript | >OphauG2|861 ATGCAACAGTCTCCATGTGCCGACAGCACTTCTACGGGCCCGGTACAAGAGACGCCGGCTGAGCGACAATGCGTC ATTTGCTTCCAAGCCATTACCAAACCATGCTTCTTGAAACCATGCGGTCACGATGAATTCCACCACCACTGCATT GGCCGCTGGCTGCAGTACGAATATTCGGAATCGGAACGCTCGCGCTCTCTTGCCCGATGCCCCATATGCAGAGCG AGCATCATCGACATTGCTGCGACCCCATGCCAAGTTGGACAAGGGAAACAAAACTCGCACATCACGTCACTTGAC CATGTTCCATCACGGCGTGTAAACCATACCTCCCGCTCTCGACGTTCGACGTGGTTCAGGACCCATGATGCCGAG CTCCGACGGCGTCAACGCTGGACCCGGAGAGAGAGCGCAAGTCTAGACTTTCGACGCGCCGTCTATTCTTACTCG CTATACTCGCTGCACATGGGCTCGAATCCTCTCTCTGGATACCGTGAAGTTTCAAGACAGCGGTTTGAGACTGAG ATGCAGCTCCAGAATCGGGCGCGGGCTTTTCTTCGACGCGACCTGCGCGCCTTTAGCTGGCTGACGACTCCAGAC ATGGATCAAGATTCTGTTTGGCCCGCGAATTCAAGCCCCACTGGCGCACAACGCCCCAGGCTGGCCCTGGAAAAG CTAGTGAGCCATATCATGCGGCTGCTGCTCGTATTTGAAATCCGCGGTAGTGACGGTCACCTGGAAGACCATCTG GTAACACATCTTGGGCGCGCCAATGCAAGACTTTTCATACACGAATTACATTCATTTCTCCGAAGTCCTTGCCAC AGGGTGGAAGATTGGGACCGCATGGTGCGATACGACACTGGTGCGATGGCGGCTCCAAGGCAGCCAATTCGTCAC ACCGTCATGACTGCCCTAGGCCAAGGGGCACCCTCGACGAGCAATCCTGGTCCATGA |
| Gene | >OphauG2|861 ATGCAACAGTCTCCATGTGCCGACAGCACTTCTACGGGCCCGGTACAAGAGACGCCGGCTGAGCGACAATGCGTC ATTTGCTTCCAAGCCATTACCAAACCATGCTTCTTGAAACCATGCGGTCACGATGAATTCCACCACCACTGCATT GGCCGCTGGCTGCAGTACGAATATTCGGAATCGGAACGCTCGCGCTCTCTTGCCCGATGCCCCATATGCAGAGCG AGCATCATCGACATTGCTGCGACCCCATGCCAAGTTGGACAAGGGAAACAAAACTCGCACATCACGTCACTTGAC CATGTTCCATCACGGCGTGTAAACCATACCTCCCGCTCTCGACGTTCGACGTGGTTCAGGACCCATGATGCCGAG CTCCGACGGCGTCAACGCTGGACCCGGAGAGAGAGCGCAAGTCTAGACTTTCGACGCGCCGTCTATTCTTACTCG CTATACTCGCTGCACATGGGCTCGAATCCTCTCTCTGGATACCGTGAAGTTTCAAGACAGCGGTTTGAGACTGAG ATGCAGCTCCAGAATCGGGCGCGGGCTTTTCTTCGACGCGACCTGCGCGCCTTTAGCTGGCTGACGACTCCAGAC ATGGATCAAGATTCTGTTTGGCCCGCGAATTCAAGCCCCACTGGCGCACAACGCCCCAGGCTGGCCCTGGAAAAG CTAGTGAGCCATATCATGCGGCTGCTGCTCGTATTTGAAATCCGCGGTAGTGACGGTCACCTGGAAGACCATCTG GTAACACATCTTGGGCGCGCCAATGCAAGACTTTTCATACACGAATTACATTCATTTCTCCGAAGTCCTTGCCAC AGGGTGGAAGATTGGGACCGCATGGTGCGATACGACACTGGTGCGATGGCGGCTCCAAGGCAGCCAATTCGTCAC ACCGTCATGACTGCCCTAGGCCAAGGGGCACCCTCGACGAGCAATCCTGGTCCATGA |