Protein ID | OphauG2|861 |
Gene name | |
Location | Contig_1224:2402..3359 |
Strand | + |
Gene length (bp) | 957 |
Transcript length (bp) | 957 |
Coding sequence length (bp) | 957 |
Protein length (aa) | 319 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13639 | zf-RING_2 | Ring finger domain | 2.9E-08 | 23 | 74 |
PF00097 | zf-C3HC4 | Zinc finger, C3HC4 type (RING finger) | 7.7E-06 | 24 | 73 |
GO Term | Description | Terminal node |
---|---|---|
GO:0046872 | metal ion binding | Yes |
GO:0003674 | molecular_function | No |
GO:0043169 | cation binding | No |
GO:0005488 | binding | No |
GO:0043167 | ion binding | No |
Orthofinder run ID | 4 |
Orthogroup | 978 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauG2|861 MQQSPCADSTSTGPVQETPAERQCVICFQAITKPCFLKPCGHDEFHHHCIGRWLQYEYSESERSRSLARCPICRA SIIDIAATPCQVGQGKQNSHITSLDHVPSRRVNHTSRSRRSTWFRTHDAELRRRQRWTRRESASLDFRRAVYSYS LYSLHMGSNPLSGYREVSRQRFETEMQLQNRARAFLRRDLRAFSWLTTPDMDQDSVWPANSSPTGAQRPRLALEK LVSHIMRLLLVFEIRGSDGHLEDHLVTHLGRANARLFIHELHSFLRSPCHRVEDWDRMVRYDTGAMAAPRQPIRH TVMTALGQGAPSTSNPGP* |
Coding | >OphauG2|861 ATGCAACAGTCTCCATGTGCCGACAGCACTTCTACGGGCCCGGTACAAGAGACGCCGGCTGAGCGACAATGCGTC ATTTGCTTCCAAGCCATTACCAAACCATGCTTCTTGAAACCATGCGGTCACGATGAATTCCACCACCACTGCATT GGCCGCTGGCTGCAGTACGAATATTCGGAATCGGAACGCTCGCGCTCTCTTGCCCGATGCCCCATATGCAGAGCG AGCATCATCGACATTGCTGCGACCCCATGCCAAGTTGGACAAGGGAAACAAAACTCGCACATCACGTCACTTGAC CATGTTCCATCACGGCGTGTAAACCATACCTCCCGCTCTCGACGTTCGACGTGGTTCAGGACCCATGATGCCGAG CTCCGACGGCGTCAACGCTGGACCCGGAGAGAGAGCGCAAGTCTAGACTTTCGACGCGCCGTCTATTCTTACTCG CTATACTCGCTGCACATGGGCTCGAATCCTCTCTCTGGATACCGTGAAGTTTCAAGACAGCGGTTTGAGACTGAG ATGCAGCTCCAGAATCGGGCGCGGGCTTTTCTTCGACGCGACCTGCGCGCCTTTAGCTGGCTGACGACTCCAGAC ATGGATCAAGATTCTGTTTGGCCCGCGAATTCAAGCCCCACTGGCGCACAACGCCCCAGGCTGGCCCTGGAAAAG CTAGTGAGCCATATCATGCGGCTGCTGCTCGTATTTGAAATCCGCGGTAGTGACGGTCACCTGGAAGACCATCTG GTAACACATCTTGGGCGCGCCAATGCAAGACTTTTCATACACGAATTACATTCATTTCTCCGAAGTCCTTGCCAC AGGGTGGAAGATTGGGACCGCATGGTGCGATACGACACTGGTGCGATGGCGGCTCCAAGGCAGCCAATTCGTCAC ACCGTCATGACTGCCCTAGGCCAAGGGGCACCCTCGACGAGCAATCCTGGTCCATGA |
Transcript | >OphauG2|861 ATGCAACAGTCTCCATGTGCCGACAGCACTTCTACGGGCCCGGTACAAGAGACGCCGGCTGAGCGACAATGCGTC ATTTGCTTCCAAGCCATTACCAAACCATGCTTCTTGAAACCATGCGGTCACGATGAATTCCACCACCACTGCATT GGCCGCTGGCTGCAGTACGAATATTCGGAATCGGAACGCTCGCGCTCTCTTGCCCGATGCCCCATATGCAGAGCG AGCATCATCGACATTGCTGCGACCCCATGCCAAGTTGGACAAGGGAAACAAAACTCGCACATCACGTCACTTGAC CATGTTCCATCACGGCGTGTAAACCATACCTCCCGCTCTCGACGTTCGACGTGGTTCAGGACCCATGATGCCGAG CTCCGACGGCGTCAACGCTGGACCCGGAGAGAGAGCGCAAGTCTAGACTTTCGACGCGCCGTCTATTCTTACTCG CTATACTCGCTGCACATGGGCTCGAATCCTCTCTCTGGATACCGTGAAGTTTCAAGACAGCGGTTTGAGACTGAG ATGCAGCTCCAGAATCGGGCGCGGGCTTTTCTTCGACGCGACCTGCGCGCCTTTAGCTGGCTGACGACTCCAGAC ATGGATCAAGATTCTGTTTGGCCCGCGAATTCAAGCCCCACTGGCGCACAACGCCCCAGGCTGGCCCTGGAAAAG CTAGTGAGCCATATCATGCGGCTGCTGCTCGTATTTGAAATCCGCGGTAGTGACGGTCACCTGGAAGACCATCTG GTAACACATCTTGGGCGCGCCAATGCAAGACTTTTCATACACGAATTACATTCATTTCTCCGAAGTCCTTGCCAC AGGGTGGAAGATTGGGACCGCATGGTGCGATACGACACTGGTGCGATGGCGGCTCCAAGGCAGCCAATTCGTCAC ACCGTCATGACTGCCCTAGGCCAAGGGGCACCCTCGACGAGCAATCCTGGTCCATGA |
Gene | >OphauG2|861 ATGCAACAGTCTCCATGTGCCGACAGCACTTCTACGGGCCCGGTACAAGAGACGCCGGCTGAGCGACAATGCGTC ATTTGCTTCCAAGCCATTACCAAACCATGCTTCTTGAAACCATGCGGTCACGATGAATTCCACCACCACTGCATT GGCCGCTGGCTGCAGTACGAATATTCGGAATCGGAACGCTCGCGCTCTCTTGCCCGATGCCCCATATGCAGAGCG AGCATCATCGACATTGCTGCGACCCCATGCCAAGTTGGACAAGGGAAACAAAACTCGCACATCACGTCACTTGAC CATGTTCCATCACGGCGTGTAAACCATACCTCCCGCTCTCGACGTTCGACGTGGTTCAGGACCCATGATGCCGAG CTCCGACGGCGTCAACGCTGGACCCGGAGAGAGAGCGCAAGTCTAGACTTTCGACGCGCCGTCTATTCTTACTCG CTATACTCGCTGCACATGGGCTCGAATCCTCTCTCTGGATACCGTGAAGTTTCAAGACAGCGGTTTGAGACTGAG ATGCAGCTCCAGAATCGGGCGCGGGCTTTTCTTCGACGCGACCTGCGCGCCTTTAGCTGGCTGACGACTCCAGAC ATGGATCAAGATTCTGTTTGGCCCGCGAATTCAAGCCCCACTGGCGCACAACGCCCCAGGCTGGCCCTGGAAAAG CTAGTGAGCCATATCATGCGGCTGCTGCTCGTATTTGAAATCCGCGGTAGTGACGGTCACCTGGAAGACCATCTG GTAACACATCTTGGGCGCGCCAATGCAAGACTTTTCATACACGAATTACATTCATTTCTCCGAAGTCCTTGCCAC AGGGTGGAAGATTGGGACCGCATGGTGCGATACGACACTGGTGCGATGGCGGCTCCAAGGCAGCCAATTCGTCAC ACCGTCATGACTGCCCTAGGCCAAGGGGCACCCTCGACGAGCAATCCTGGTCCATGA |