© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | OphauG2|815 |
| Gene name | |
| Location | Contig_121:16193..18024 |
| Strand | + |
| Gene length (bp) | 1831 |
| Transcript length (bp) | 1659 |
| Coding sequence length (bp) | 1659 |
| Protein length (aa) | 553 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 1.1E-42 | 70 | 517 |
| PF00324 | AA_permease | Amino acid permease | 1.4E-25 | 87 | 527 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O59813|YCT3_SCHPO | Uncharacterized amino-acid permease C794.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC794.03 PE=2 SV=1 | 46 | 526 | 5.0E-71 |
| sp|Q9UT18|THI9_SCHPO | Thiamine transporter thi9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=thi9 PE=1 SV=1 | 22 | 524 | 2.0E-62 |
| sp|Q9ZU50|BAT1_ARATH | Amino-acid permease BAT1 OS=Arabidopsis thaliana GN=BAT1 PE=2 SV=2 | 33 | 545 | 6.0E-57 |
| sp|B9EXZ6|BAT1_ORYSJ | Amino-acid permease BAT1 homolog OS=Oryza sativa subsp. japonica GN=BAT1 PE=2 SV=1 | 53 | 547 | 3.0E-48 |
| sp|O74537|YCQ4_SCHPO | Uncharacterized amino-acid permease C74.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC74.04 PE=3 SV=1 | 37 | 541 | 4.0E-47 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O59813|YCT3_SCHPO | Uncharacterized amino-acid permease C794.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC794.03 PE=2 SV=1 | 46 | 526 | 5.0E-71 |
| sp|Q9UT18|THI9_SCHPO | Thiamine transporter thi9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=thi9 PE=1 SV=1 | 22 | 524 | 2.0E-62 |
| sp|Q9ZU50|BAT1_ARATH | Amino-acid permease BAT1 OS=Arabidopsis thaliana GN=BAT1 PE=2 SV=2 | 33 | 545 | 6.0E-57 |
| sp|B9EXZ6|BAT1_ORYSJ | Amino-acid permease BAT1 homolog OS=Oryza sativa subsp. japonica GN=BAT1 PE=2 SV=1 | 53 | 547 | 3.0E-48 |
| sp|O74537|YCQ4_SCHPO | Uncharacterized amino-acid permease C74.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC74.04 PE=3 SV=1 | 37 | 541 | 4.0E-47 |
| sp|Q9US40|YFZ1_SCHPO | Uncharacterized amino-acid permease C1039.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.01 PE=3 SV=1 | 1 | 541 | 4.0E-46 |
| sp|O60113|YG64_SCHPO | Uncharacterized amino-acid permease C15C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.04c PE=3 SV=1 | 44 | 551 | 2.0E-42 |
| sp|O74248|GPT1_CANAX | Putative polyamine transporter OS=Candida albicans GN=GPT1 PE=3 SV=1 | 37 | 548 | 1.0E-40 |
| sp|Q10087|YAO8_SCHPO | Uncharacterized amino-acid permease C11D3.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.08c PE=3 SV=1 | 39 | 550 | 9.0E-40 |
| sp|Q9C0Z0|YKM2_SCHPO | Uncharacterized amino-acid permease PB24D3.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.02c PE=3 SV=1 | 39 | 551 | 5.0E-38 |
| sp|O59942|AAP2_NEUCR | Amino-acid permease 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=aap-2 PE=2 SV=2 | 50 | 541 | 5.0E-33 |
| sp|Q09887|YC9D_SCHPO | Uncharacterized amino-acid permease C584.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC584.13 PE=3 SV=1 | 44 | 541 | 5.0E-33 |
| sp|P32837|UGA4_YEAST | GABA-specific permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UGA4 PE=1 SV=1 | 41 | 513 | 3.0E-31 |
| sp|P19807|HNM1_YEAST | Choline transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HNM1 PE=1 SV=1 | 31 | 526 | 3.0E-27 |
| sp|P36029|TPO5_YEAST | Polyamine transporter TPO5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO5 PE=1 SV=1 | 47 | 521 | 4.0E-09 |
| sp|Q8W4K3|CAAT4_ARATH | Cationic amino acid transporter 4, vacuolar OS=Arabidopsis thaliana GN=CAT4 PE=2 SV=1 | 83 | 445 | 3.0E-07 |
| sp|Q9SHH0|CAAT8_ARATH | Cationic amino acid transporter 8, vacuolar OS=Arabidopsis thaliana GN=CAT8 PE=2 SV=1 | 284 | 439 | 2.0E-06 |
| sp|Q8GYB4|CAAT3_ARATH | Cationic amino acid transporter 3, mitochondrial OS=Arabidopsis thaliana GN=CAT3 PE=2 SV=1 | 288 | 459 | 2.0E-06 |
| sp|O64759|CAAT5_ARATH | Cationic amino acid transporter 5 OS=Arabidopsis thaliana GN=CAT5 PE=1 SV=1 | 35 | 459 | 4.0E-06 |
| sp|O07576|YHDG_BACSU | Uncharacterized amino acid permease YhdG OS=Bacillus subtilis (strain 168) GN=yhdG PE=2 SV=1 | 50 | 445 | 4.0E-06 |
| sp|Q9ASS7|CAAT2_ARATH | Cationic amino acid transporter 2, vacuolar OS=Arabidopsis thaliana GN=CAT2 PE=2 SV=1 | 83 | 459 | 9.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016020 | membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0051234 | establishment of localization | No |
| GO:0003674 | molecular_function | No |
| GO:0005215 | transporter activity | No |
| GO:0051179 | localization | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 86 | 108 | 22 |
| 2 | 115 | 137 | 22 |
| 3 | 157 | 179 | 22 |
| 4 | 186 | 208 | 22 |
| 5 | 223 | 245 | 22 |
| 6 | 310 | 332 | 22 |
| 7 | 360 | 382 | 22 |
| 8 | 408 | 430 | 22 |
| 9 | 434 | 456 | 22 |
| 10 | 481 | 503 | 22 |
| 11 | 508 | 530 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|815 MSKVLASTRVKAFRRLRSNAWERKGPRLLDRPDEALNPDCDASQVISRDDELLASLGYKRELNRGLGLFENWAAT FSCMNFVSGMPVLFGWVMMTGGPPAAFTSWTVVSTVSCLLALAMAEIAAALPTAGGIYFWAYRLGGPEWGPYLSW MTAWWNWSAWVLAVPGTQQGATNFLISALQLNYPDAAFVSESWFTFVVIIVGLLIAMIPNITNQALLRLYFRFAI GIFLILFFLFWIWFPIAVAGRFQSPSFVFKSFHNGINQGPTKQASDAYCWAISFLFGAWEFGGYDASAHLAEETK DASRTVARGMYLSTLSTTLLSIPTLVLILFCIQDFDALISATYANNWAEFLVQVVGPRGATAILVLSWIDCTCAT ASVILSAQRVTFAISRDDILPASFLFRRVSGKNAVPINAALLVFFIAALVSLTVLGSSVAFGAITATTVICQSMS YLFVLIPRYTFGTTTFEPAAWNLGAISRPIGYLSILWLTFLSCILLLPQVFPVTIRTLNYAPVCLVIVTAVSVIG WFLPFGMGGRHWFKGPCNTVQAQPEET* |
| Coding | >OphauG2|815 ATGTCCAAGGTTTTGGCTTCCACTCGCGTCAAGGCGTTTCGCCGCCTGAGAAGCAATGCCTGGGAGCGCAAGGGT CCTCGTCTTCTGGATCGACCAGACGAGGCGCTGAATCCGGATTGCGATGCTTCGCAGGTGATTTCCCGCGACGAC GAGCTTCTCGCCTCTCTGGGCTACAAACGAGAATTAAACCGCGGCCTGGGATTATTCGAAAACTGGGCGGCAACT TTTTCGTGCATGAACTTTGTCTCGGGAATGCCAGTTTTGTTTGGCTGGGTCATGATGACTGGCGGCCCACCAGCC GCCTTTACCTCGTGGACCGTGGTCAGTACCGTTTCATGCTTATTGGCATTGGCCATGGCTGAGATTGCCGCTGCC TTACCAACGGCTGGTGGCATCTACTTTTGGGCCTACCGTCTGGGAGGCCCGGAATGGGGTCCGTATCTGTCCTGG ATGACTGCATGGTGGAACTGGTCGGCTTGGGTCTTGGCTGTTCCCGGCACTCAACAAGGCGCCACGAATTTCCTC ATTTCCGCTCTCCAGCTCAACTATCCAGATGCCGCTTTTGTCAGTGAGAGCTGGTTCACCTTTGTTGTTATTATC GTCGGACTCTTGATTGCCATGATACCAAATATTACGAACCAAGCCTTATTACGATTATATTTCCGCTTTGCCATT GGCATCTTCCTGATACTCTTTTTCCTCTTCTGGATCTGGTTTCCCATTGCCGTGGCTGGCCGGTTTCAGTCTCCA AGCTTCGTCTTCAAGTCGTTCCACAACGGTATCAACCAAGGCCCAACCAAACAAGCTTCAGATGCATACTGCTGG GCCATTAGCTTTCTCTTTGGTGCTTGGGAGTTTGGCGGCTACGATGCGTCGGCCCACTTGGCAGAGGAGACCAAA GACGCCAGCAGAACCGTGGCCCGAGGAATGTATCTCTCGACTCTCTCCACGACGCTCCTTTCCATCCCTACCTTG GTCTTGATTCTCTTTTGCATACAAGACTTTGATGCCTTGATCTCTGCCACTTATGCCAACAATTGGGCCGAGTTT CTTGTTCAGGTTGTTGGTCCTCGCGGCGCCACCGCCATTCTGGTTCTCAGCTGGATCGACTGCACTTGCGCTACA GCTTCCGTTATTCTGTCGGCTCAGCGCGTCACCTTTGCCATCTCGCGCGACGACATCTTGCCTGCGTCCTTTTTG TTCCGAAGAGTGAGTGGGAAGAACGCAGTGCCAATCAATGCTGCCTTGCTGGTCTTCTTCATCGCCGCCCTTGTC AGTCTCACTGTTCTTGGATCCTCAGTCGCCTTTGGCGCCATTACAGCAACGACGGTTATTTGCCAAAGCATGAGT TATCTGTTTGTCTTGATTCCTCGATATACCTTTGGCACGACCACCTTTGAGCCAGCTGCATGGAATCTTGGCGCC ATTTCGCGCCCGATAGGATACCTTTCTATACTCTGGCTCACCTTTCTTTCATGTATTCTGCTGCTTCCACAGGTT TTCCCCGTCACGATACGCACGCTGAACTATGCTCCTGTATGTCTCGTTATTGTCACGGCTGTGTCTGTTATTGGC TGGTTTCTTCCATTTGGAATGGGAGGGCGTCACTGGTTCAAAGGTCCATGCAATACGGTACAGGCGCAGCCCGAG GAGACTTGA |
| Transcript | >OphauG2|815 ATGTCCAAGGTTTTGGCTTCCACTCGCGTCAAGGCGTTTCGCCGCCTGAGAAGCAATGCCTGGGAGCGCAAGGGT CCTCGTCTTCTGGATCGACCAGACGAGGCGCTGAATCCGGATTGCGATGCTTCGCAGGTGATTTCCCGCGACGAC GAGCTTCTCGCCTCTCTGGGCTACAAACGAGAATTAAACCGCGGCCTGGGATTATTCGAAAACTGGGCGGCAACT TTTTCGTGCATGAACTTTGTCTCGGGAATGCCAGTTTTGTTTGGCTGGGTCATGATGACTGGCGGCCCACCAGCC GCCTTTACCTCGTGGACCGTGGTCAGTACCGTTTCATGCTTATTGGCATTGGCCATGGCTGAGATTGCCGCTGCC TTACCAACGGCTGGTGGCATCTACTTTTGGGCCTACCGTCTGGGAGGCCCGGAATGGGGTCCGTATCTGTCCTGG ATGACTGCATGGTGGAACTGGTCGGCTTGGGTCTTGGCTGTTCCCGGCACTCAACAAGGCGCCACGAATTTCCTC ATTTCCGCTCTCCAGCTCAACTATCCAGATGCCGCTTTTGTCAGTGAGAGCTGGTTCACCTTTGTTGTTATTATC GTCGGACTCTTGATTGCCATGATACCAAATATTACGAACCAAGCCTTATTACGATTATATTTCCGCTTTGCCATT GGCATCTTCCTGATACTCTTTTTCCTCTTCTGGATCTGGTTTCCCATTGCCGTGGCTGGCCGGTTTCAGTCTCCA AGCTTCGTCTTCAAGTCGTTCCACAACGGTATCAACCAAGGCCCAACCAAACAAGCTTCAGATGCATACTGCTGG GCCATTAGCTTTCTCTTTGGTGCTTGGGAGTTTGGCGGCTACGATGCGTCGGCCCACTTGGCAGAGGAGACCAAA GACGCCAGCAGAACCGTGGCCCGAGGAATGTATCTCTCGACTCTCTCCACGACGCTCCTTTCCATCCCTACCTTG GTCTTGATTCTCTTTTGCATACAAGACTTTGATGCCTTGATCTCTGCCACTTATGCCAACAATTGGGCCGAGTTT CTTGTTCAGGTTGTTGGTCCTCGCGGCGCCACCGCCATTCTGGTTCTCAGCTGGATCGACTGCACTTGCGCTACA GCTTCCGTTATTCTGTCGGCTCAGCGCGTCACCTTTGCCATCTCGCGCGACGACATCTTGCCTGCGTCCTTTTTG TTCCGAAGAGTGAGTGGGAAGAACGCAGTGCCAATCAATGCTGCCTTGCTGGTCTTCTTCATCGCCGCCCTTGTC AGTCTCACTGTTCTTGGATCCTCAGTCGCCTTTGGCGCCATTACAGCAACGACGGTTATTTGCCAAAGCATGAGT TATCTGTTTGTCTTGATTCCTCGATATACCTTTGGCACGACCACCTTTGAGCCAGCTGCATGGAATCTTGGCGCC ATTTCGCGCCCGATAGGATACCTTTCTATACTCTGGCTCACCTTTCTTTCATGTATTCTGCTGCTTCCACAGGTT TTCCCCGTCACGATACGCACGCTGAACTATGCTCCTGTATGTCTCGTTATTGTCACGGCTGTGTCTGTTATTGGC TGGTTTCTTCCATTTGGAATGGGAGGGCGTCACTGGTTCAAAGGTCCATGCAATACGGTACAGGCGCAGCCCGAG GAGACTTGA |
| Gene | >OphauG2|815 ATGTCCAAGGTTTTGGCTTCCACTCGCGTCAAGGCGTTTCGCCGCCTGAGAAGCAATGCCTGGGAGCGCAAGGGT CCTCGTCTTCTGGATCGACCAGACGAGGCGCTGAATCCGGATTGCGATGCTTCGCAGGTGATTTCCCGCGACGAC GAGCTTCTCGCCTCTCTGGGCTACAAACGAGGTGCCTCCGTCTCATGGCCCAAATGTCGTGCCGCAAACTGACAC CACGCTTGGTAGAATTAAACCGCGGCCTGGGATTATTCGAAAACTGGGCGGCAACTTTTTCGGTTCGCTCCTGCA CCGTGCCCTGAAGCCGTGCGTAAATATTAATACGACGCAGTGCATGAACTTTGTCTCGGGAATGCCAGTTTTGTT TGGCTGGGTCATGATGACTGGCGGCCCACCAGCCGCCTTTACCTCGTGGACCGTGGTCAGTACCGTTTCATGCTT ATTGGCATTGGCCATGGCTGAGATTGCCGCTGCCTTACCAACGGCTGGTGGCATCTACTTTTGGGCCTACCGTCT GGGAGGCCCGGAATGGGGTCCGTATCTGTCCTGGATGACTGCAGTAGGCGCCTTTTCATTGCAAAATCATGTTGC CATCTCGTCCCCGGTCTGACGCTTTTTGCAGTGGTGGAACTGGTCGGCTTGGGTCTTGGCTGTTCCCGGCACTCA ACAAGGCGCCACGAATTTCCTCATTTCCGCTCTCCAGCTCAACTATCCAGATGCCGCTTTTGTCAGTGAGAGCTG GTTCACCTTTGTTGTTATTATCGTCGGACTCTTGATTGCCATGATACCAAATATTACGAACCAAGCCTTATTACG ATTATATTTCCGCTTTGCCATTGGCATCTTCCTGATACTCTTTTTCCTCTTCTGGATCTGGTTTCCCATTGCCGT GGCTGGCCGGTTTCAGTCTCCAAGCTTCGTCTTCAAGTCGTTCCACAACGGTATCAACCAAGGCCCAACCAAACA AGCTTCAGATGCATACTGCTGGGCCATTAGCTTTCTCTTTGGTGCTTGGGAGTTTGGCGGCTACGATGCGTCGGC CCACTTGGCAGAGGAGACCAAAGACGCCAGCAGAACCGTGGCCCGAGGAATGTATCTCTCGACTCTCTCCACGAC GCTCCTTTCCATCCCTACCTTGGTCTTGATTCTCTTTTGCATACAAGACTTTGATGCCTTGATCTCTGCCACTTA TGCCAACAATTGGGCCGAGTTTCTTGTTCAGGTTGTTGGTCCTCGCGGCGCCACCGCCATTCTGGTTCTCAGCTG GATCGACTGCACTTGCGCTACAGCTTCCGTTATTCTGTCGGCTCAGCGCGTCACCTTTGCCATCTCGCGCGACGA CATCTTGCCTGCGTCCTTTTTGTTCCGAAGAGTGAGTGGGAAGAACGCAGTGCCAATCAATGCTGCCTTGCTGGT CTTCTTCATCGCCGCCCTTGTCAGTCTCACTGTTCTTGGATCCTCAGTCGCCTTTGGCGCCATTACAGCAACGAC GGTTATTTGCCAAAGCATGAGTTATCTGTTTGTCTTGATTCCTCGATATACCTTTGGCACGACCACCTTTGAGCC AGCTGCATGGAATCTTGGCGCCATTTCGCGCCCGATAGGATACCTTTCTATACTCTGGCTCACCTTTCTTTCATG TATTCTGCTGCTTCCACAGGTTTTCCCCGTCACGATACGCACGCTGAACTATGCTCCTGTATGTCTCGTTATTGT CACGGCTGTGTCTGTTATTGGCTGGTTTCTTCCATTTGGAATGGGAGGGCGTCACTGGTTCAAAGGTCCATGCAA TACGGTACAGGCGCAGCCCGAGGAGACTTGA |