Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|7986
Gene name
Location	Contig_995:3343..4345
Strand	-
Gene length (bp)	1002
Transcript length (bp)	882
Coding sequence length (bp)	882
Protein length (aa)	294

PFAM Domains

(None)

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q01302\|CCG6_NEUCR	Clock-controlled protein 6 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=ccg-6 PE=2 SV=2	34	81	1.0E-14
sp\|Q01589\|SED1_YEAST	Cell wall protein SED1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SED1 PE=1 SV=1	30	81	8.0E-12
sp\|Q01589\|SED1_YEAST	Cell wall protein SED1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SED1 PE=1 SV=1	44	89	9.0E-10
sp\|P40092\|SPI1_YEAST	Uncharacterized cell wall protein SPI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SPI1 PE=2 SV=1	40	91	1.0E-08

GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 25	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|7986 MFKLNAVLASTATLVASASAGVVANQPRNYNQSVVYTTVVATAYTTYCPSPTEIPIGSVTYTVTEPTTLTITDCP CTITKPHTPPPSTPTYGPPPEISCSEEYPPPAGTTAIPAPPPANTPAPPAPPANTPAPPSPPAPPVNPPAPAPPA PPAPPAPPANPPAPPAPPANPAPPAPPAPPAAPVSPPAHPPAAPAPPAPPANSPAAPAPAPPVATQAPAAPAPPA PPVKSQLPVPPANTAAPVSPPESPAPPANSAAPPPNSATSAPVVPTAGAERLTAGFGALIVAIVAALI*
Coding	>OphauG2\|7986 ATGTTCAAGCTCAACGCCGTGTTGGCCTCGACGGCGACGCTTGTCGCCTCGGCCTCGGCCGGCGTCGTGGCCAAC CAGCCGCGCAACTACAACCAGTCTGTTGTCTACACCACTGTTGTTGCCACGGCTTACACCACCTACTGCCCTTCT CCCACCGAGATTCCCATTGGCAGTGTCACCTACACAGTCACTGAGCCCACCACTCTGACCATCACCGACTGTCCC TGCACAATCACCAAGCCTCACACTCCTCCTCCATCCACGCCAACCTACGGCCCCCCTCCCGAGATCAGCTGCTCT GAGGAATACCCGCCGCCTGCCGGTACCACGGCCATCCCTGCACCGCCGCCTGCCAACACTCCGGCTCCCCCCGCA CCCCCGGCAAACACTCCAGCTCCTCCATCTCCTCCAGCTCCTCCTGTCAACCCCCCGGCACCTGCTCCTCCAGCT CCTCCTGCGCCACCGGCCCCTCCAGCCAATCCTCCTGCTCCCCCTGCGCCACCCGCCAACCCAGCTCCTCCTGCT CCTCCTGCTCCTCCTGCTGCCCCTGTTTCGCCTCCTGCACATCCTCCCGCTGCCCCTGCGCCCCCTGCTCCTCCA GCAAACTCTCCCGCTGCTCCAGCTCCAGCTCCCCCTGTTGCGACTCAGGCTCCCGCTGCCCCAGCTCCCCCTGCG CCGCCTGTCAAGTCGCAGCTCCCTGTCCCTCCCGCCAACACGGCCGCTCCCGTCTCTCCTCCTGAGTCGCCTGCG CCGCCTGCCAACTCCGCTGCTCCTCCTCCCAACTCTGCCACCTCTGCGCCAGTCGTGCCAACCGCTGGCGCCGAG CGCCTCACCGCCGGCTTCGGAGCTCTGATTGTCGCCATTGTTGCTGCTCTCATTTGA
Transcript	>OphauG2\|7986 ATGTTCAAGCTCAACGCCGTGTTGGCCTCGACGGCGACGCTTGTCGCCTCGGCCTCGGCCGGCGTCGTGGCCAAC CAGCCGCGCAACTACAACCAGTCTGTTGTCTACACCACTGTTGTTGCCACGGCTTACACCACCTACTGCCCTTCT CCCACCGAGATTCCCATTGGCAGTGTCACCTACACAGTCACTGAGCCCACCACTCTGACCATCACCGACTGTCCC TGCACAATCACCAAGCCTCACACTCCTCCTCCATCCACGCCAACCTACGGCCCCCCTCCCGAGATCAGCTGCTCT GAGGAATACCCGCCGCCTGCCGGTACCACGGCCATCCCTGCACCGCCGCCTGCCAACACTCCGGCTCCCCCCGCA CCCCCGGCAAACACTCCAGCTCCTCCATCTCCTCCAGCTCCTCCTGTCAACCCCCCGGCACCTGCTCCTCCAGCT CCTCCTGCGCCACCGGCCCCTCCAGCCAATCCTCCTGCTCCCCCTGCGCCACCCGCCAACCCAGCTCCTCCTGCT CCTCCTGCTCCTCCTGCTGCCCCTGTTTCGCCTCCTGCACATCCTCCCGCTGCCCCTGCGCCCCCTGCTCCTCCA GCAAACTCTCCCGCTGCTCCAGCTCCAGCTCCCCCTGTTGCGACTCAGGCTCCCGCTGCCCCAGCTCCCCCTGCG CCGCCTGTCAAGTCGCAGCTCCCTGTCCCTCCCGCCAACACGGCCGCTCCCGTCTCTCCTCCTGAGTCGCCTGCG CCGCCTGCCAACTCCGCTGCTCCTCCTCCCAACTCTGCCACCTCTGCGCCAGTCGTGCCAACCGCTGGCGCCGAG CGCCTCACCGCCGGCTTCGGAGCTCTGATTGTCGCCATTGTTGCTGCTCTCATTTGA
Gene	>OphauG2\|7986 ATGTTCAAGCTCAACGCCGTGTTGGCCTCGACGGCGACGCTTGTCGCCTCGGCCTCGGCCGGCGTCGTGGCCAAC CAGCCGCGCAACTACAACCAGTCTGTTGTCTACACCACTGTTGTTGCCACGGCTTACACCACCTACTGCCCTGTG AGTCTCTTCGAGCCCTGTCTTGCTACTGCTGGAGTCTTTGTTTTTCCCTTGCCCTACTCCTGAAATCAATACATT CCTCTGCCTATGCTAACAAGCCCCGTTTGAAAAAAAAAACAGTCTCCCACCGAGATTCCCATTGGCAGTGTCACC TACACAGTCACTGAGCCCACCACTCTGACCATCACCGACTGTCCCTGCACAATCACCAAGCCTCACACTCCTCCT CCATCCACGCCAACCTACGGCCCCCCTCCCGAGATCAGCTGCTCTGAGGAATACCCGCCGCCTGCCGGTACCACG GCCATCCCTGCACCGCCGCCTGCCAACACTCCGGCTCCCCCCGCACCCCCGGCAAACACTCCAGCTCCTCCATCT CCTCCAGCTCCTCCTGTCAACCCCCCGGCACCTGCTCCTCCAGCTCCTCCTGCGCCACCGGCCCCTCCAGCCAAT CCTCCTGCTCCCCCTGCGCCACCCGCCAACCCAGCTCCTCCTGCTCCTCCTGCTCCTCCTGCTGCCCCTGTTTCG CCTCCTGCACATCCTCCCGCTGCCCCTGCGCCCCCTGCTCCTCCAGCAAACTCTCCCGCTGCTCCAGCTCCAGCT CCCCCTGTTGCGACTCAGGCTCCCGCTGCCCCAGCTCCCCCTGCGCCGCCTGTCAAGTCGCAGCTCCCTGTCCCT CCCGCCAACACGGCCGCTCCCGTCTCTCCTCCTGAGTCGCCTGCGCCGCCTGCCAACTCCGCTGCTCCTCCTCCC AACTCTGCCACCTCTGCGCCAGTCGTGCCAACCGCTGGCGCCGAGCGCCTCACCGCCGGCTTCGGAGCTCTGATT GTCGCCATTGTTGCTGCTCTCATTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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