Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|7985
Gene name
LocationContig_995:418..2656
Strand+
Gene length (bp)2238
Transcript length (bp)2064
Coding sequence length (bp)2064
Protein length (aa) 688

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04049 ANAPC8 Anaphase promoting complex subunit 8 / Cdc23 2.6E-53 10 201
PF13181 TPR_8 Tetratricopeptide repeat 2.8E-03 393 424
PF13181 TPR_8 Tetratricopeptide repeat 6.9E-05 427 457
PF13181 TPR_8 Tetratricopeptide repeat 1.2E-02 552 578
PF13414 TPR_11 TPR repeat 1.2E-06 433 472

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O94556|APC8_SCHPO Anaphase-promoting complex subunit 8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cut23 PE=1 SV=2 6 679 2.0E-129
sp|P16522|CDC23_YEAST Anaphase-promoting complex subunit CDC23 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDC23 PE=1 SV=1 8 673 5.0E-99
sp|Q9STS3|CDC23_ARATH Anaphase-promoting complex subunit 8 OS=Arabidopsis thaliana GN=APC8 PE=1 SV=1 160 673 1.0E-80
sp|A1A4R8|CDC23_BOVIN Cell division cycle protein 23 homolog OS=Bos taurus GN=CDC23 PE=2 SV=1 162 520 3.0E-78
sp|Q9UJX2|CDC23_HUMAN Cell division cycle protein 23 homolog OS=Homo sapiens GN=CDC23 PE=1 SV=3 162 520 5.0E-78
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Swissprot ID Swissprot Description Start End E-value
sp|O94556|APC8_SCHPO Anaphase-promoting complex subunit 8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cut23 PE=1 SV=2 6 679 2.0E-129
sp|P16522|CDC23_YEAST Anaphase-promoting complex subunit CDC23 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDC23 PE=1 SV=1 8 673 5.0E-99
sp|Q9STS3|CDC23_ARATH Anaphase-promoting complex subunit 8 OS=Arabidopsis thaliana GN=APC8 PE=1 SV=1 160 673 1.0E-80
sp|A1A4R8|CDC23_BOVIN Cell division cycle protein 23 homolog OS=Bos taurus GN=CDC23 PE=2 SV=1 162 520 3.0E-78
sp|Q9UJX2|CDC23_HUMAN Cell division cycle protein 23 homolog OS=Homo sapiens GN=CDC23 PE=1 SV=3 162 520 5.0E-78
sp|Q8BGZ4|CDC23_MOUSE Cell division cycle protein 23 homolog OS=Mus musculus GN=Cdc23 PE=1 SV=2 162 520 2.0E-77
sp|Q86B11|CDC23_DICDI Anaphase-promoting complex subunit 8 OS=Dictyostelium discoideum GN=anapc8 PE=3 SV=1 228 520 2.0E-73
sp|Q19294|CDC23_CAEEL Cell division cycle protein 23 homolog OS=Caenorhabditis elegans GN=mat-3 PE=1 SV=2 229 609 4.0E-41
sp|Q06AN9|CD27A_ARATH Cell division cycle protein 27 homolog A OS=Arabidopsis thaliana GN=CDC27A PE=1 SV=2 270 570 5.0E-27
sp|Q8LGU6|CD27B_ARATH Cell division cycle protein 27 homolog B OS=Arabidopsis thaliana GN=CDC27B PE=1 SV=1 339 524 5.0E-25
sp|P30260|CDC27_HUMAN Cell division cycle protein 27 homolog OS=Homo sapiens GN=CDC27 PE=1 SV=2 335 524 7.0E-25
sp|P17885|BIMA_EMENI Protein bimA OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=bimA PE=2 SV=1 343 520 7.0E-25
sp|A7Z061|CDC27_BOVIN Cell division cycle protein 27 homolog OS=Bos taurus GN=CDC27 PE=2 SV=1 335 524 8.0E-25
sp|A2A6Q5|CDC27_MOUSE Cell division cycle protein 27 homolog OS=Mus musculus GN=Cdc27 PE=1 SV=1 335 524 1.0E-24
sp|Q4V8A2|CDC27_RAT Cell division cycle protein 27 homolog OS=Rattus norvegicus GN=Cdc27 PE=2 SV=1 335 524 1.0E-24
sp|Q54J83|APC3_DICDI Anaphase-promoting complex subunit 3 OS=Dictyostelium discoideum GN=anapc3 PE=3 SV=1 334 521 5.0E-24
sp|P10505|APC3_SCHPO Anaphase-promoting complex subunit 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nuc2 PE=1 SV=3 322 524 1.0E-19
sp|Q9N593|CDC27_CAEEL Cell division cycle protein 27 homolog OS=Caenorhabditis elegans GN=mat-1 PE=1 SV=1 353 549 1.0E-17
sp|P38042|CDC27_YEAST Anaphase-promoting complex subunit CDC27 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDC27 PE=1 SV=2 347 515 8.0E-16
sp|O60184|CYC8_SCHPO General transcriptional corepressor ssn6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ssn6 PE=1 SV=1 295 520 8.0E-08
sp|Q58208|Y798_METJA TPR repeat-containing protein MJ0798 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0798 PE=3 SV=1 402 578 2.0E-06
sp|Q9FMA3|PEX5_ARATH Peroxisome biogenesis protein 5 OS=Arabidopsis thaliana GN=PEX5 PE=1 SV=1 378 497 3.0E-06
sp|O77033|CYC8_DICDI General transcriptional corepressor trfA OS=Dictyostelium discoideum GN=trfA PE=2 SV=1 404 526 1.0E-05
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GO

GO Term Description Terminal node
GO:0030071 regulation of mitotic metaphase/anaphase transition Yes
GO:0005680 anaphase-promoting complex Yes
GO:0005515 protein binding Yes
GO:0140535 intracellular protein-containing complex No
GO:0050794 regulation of cellular process No
GO:1905818 regulation of chromosome separation No
GO:0140513 nuclear protein-containing complex No
GO:0050789 regulation of biological process No
GO:0051726 regulation of cell cycle No
GO:0000151 ubiquitin ligase complex No
GO:0008150 biological_process No
GO:1901987 regulation of cell cycle phase transition No
GO:0032991 protein-containing complex No
GO:0033044 regulation of chromosome organization No
GO:0051128 regulation of cellular component organization No
GO:1902099 regulation of metaphase/anaphase transition of cell cycle No
GO:0005575 cellular_component No
GO:0065007 biological regulation No
GO:0005488 binding No
GO:1901990 regulation of mitotic cell cycle phase transition No
GO:1990234 transferase complex No
GO:0000152 nuclear ubiquitin ligase complex No
GO:0051983 regulation of chromosome segregation No
GO:0033043 regulation of organelle organization No
GO:0003674 molecular_function No
GO:0033045 regulation of sister chromatid segregation No
GO:1902494 catalytic complex No
GO:0010965 regulation of mitotic sister chromatid separation No
GO:0010564 regulation of cell cycle process No
GO:0007346 regulation of mitotic cell cycle No
GO:0031461 cullin-RING ubiquitin ligase complex No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 13 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|7985
MPLTPQEVAQLRIALQDAVVKCSERCLYQSAKWAAELLNALPEADTRDAEGDADLYSGYMSPLISPNSDPEEAAL
EAQEVGKYLLAKSFFDCKEFDRCAAVFLPETLLSAVLESHTVDPTPAATTTTATTSTSTSTQKDKAKAKAPDADP
SLSSKRPLPRISQKSLFIALYAKFMSGEKSKYEESEMVMGPQDVGTVVNKQLLPVGRYLAAWFAERTNDDGDSPA
NQGWLEYLYGMVLAKEKNDAKALELLIRSVHKIPMNWGCWLEMASLISRVEELNKVLKHCPQNIVAFMFHLHMAL
ELYQQSSSLAVNLEKLLCIFPTSSFLLSCNALLAYHAKDLIAAEQQFSQLLALHPHRLDSLDHYSNILYILNRRP
KLAFLAQLCSSVDKFRPESCVVIGNYYSLLSMHEKAVQFFRRALTLDRTCLSAWTLMGHEYVELKNTHAAIESYR
RAVDVNRRDYRAWYGLGQTYEMLEMHAYALWYYKKAAGLRPWDGKMWLAVGTCMQKMGRERDGIKALKRALLADT
YYDAGSSLGCGRNIFGAYKPTGCMDPEILLQIAVMYDQVGDEDEAKAYMELCVAQEVGSNSMAAADGSPGESAMA
RNDSPGGSDDYDNNGGSGDEGTGVTPATSKARIWLARHAMRTADYVTANRLATELCQDGVEVEEAKALVREIRSI
LDSTSAGFDSTG*
Coding >OphauG2|7985
ATGCCGCTGACACCTCAAGAGGTGGCGCAGCTGCGCATCGCTCTGCAGGATGCCGTTGTCAAATGCTCGGAGCGA
TGCCTTTATCAGTCGGCAAAATGGGCCGCCGAGCTGCTCAATGCATTGCCAGAAGCAGACACTCGCGATGCAGAA
GGCGACGCCGATTTGTATTCGGGCTACATGTCCCCATTGATCTCGCCCAACTCGGACCCGGAAGAGGCGGCCCTC
GAGGCTCAGGAAGTGGGCAAATACCTCTTGGCCAAGTCGTTTTTTGACTGCAAAGAATTCGATCGCTGCGCCGCG
GTTTTCCTGCCCGAAACGCTGCTCTCGGCAGTTCTGGAATCACATACGGTGGATCCGACGCCGGCGGCAACGACG
ACGACGGCAACGACATCGACATCGACATCGACACAAAAAGACAAGGCCAAGGCCAAGGCTCCAGATGCGGACCCA
AGCTTGTCGAGCAAGCGCCCCCTGCCGCGAATCAGCCAAAAGAGCTTATTCATCGCCCTCTATGCCAAGTTTATG
TCTGGCGAAAAGAGTAAATACGAAGAGTCGGAAATGGTTATGGGCCCGCAAGACGTGGGCACCGTCGTCAACAAG
CAGCTTTTGCCTGTTGGACGCTACTTGGCTGCCTGGTTTGCCGAGAGGACAAATGATGATGGCGACTCCCCGGCT
AATCAGGGCTGGCTAGAGTACTTATACGGCATGGTCCTTGCCAAAGAGAAGAATGATGCCAAGGCGCTCGAGTTG
CTGATAAGAAGCGTACACAAGATCCCCATGAACTGGGGCTGCTGGCTCGAGATGGCTTCACTCATTTCCAGGGTT
GAAGAGTTGAATAAGGTGTTGAAGCACTGCCCGCAGAACATTGTCGCCTTCATGTTCCATCTACACATGGCACTC
GAGTTGTACCAGCAGTCTTCCAGCCTGGCAGTCAACCTGGAGAAGCTGCTATGCATCTTTCCAACTTCGTCCTTT
CTCCTGAGCTGCAATGCGCTGCTAGCATACCACGCAAAGGATCTAATTGCTGCCGAACAACAATTCAGCCAGCTG
CTGGCTCTCCACCCCCACAGACTTGACTCGCTGGACCATTACTCCAACATACTCTACATTCTGAACCGCCGGCCG
AAATTGGCCTTTCTGGCACAGCTCTGCTCTAGCGTGGACAAGTTTCGGCCAGAGTCGTGCGTTGTTATTGGAAAC
TACTACTCGCTGTTGTCGATGCACGAGAAGGCAGTTCAGTTCTTCCGCAGAGCCCTGACGCTGGACCGGACCTGT
CTTTCAGCCTGGACCTTGATGGGCCACGAATACGTGGAGCTCAAGAACACACACGCCGCCATTGAGTCGTATCGG
CGGGCGGTTGATGTCAACCGACGAGACTACCGGGCCTGGTATGGGCTCGGGCAGACATACGAGATGCTGGAAATG
CACGCATATGCCCTCTGGTACTACAAAAAGGCGGCTGGTCTACGGCCGTGGGACGGCAAGATGTGGCTGGCTGTG
GGCACGTGCATGCAAAAGATGGGGCGGGAGCGAGACGGCATCAAGGCGCTCAAACGCGCGCTGCTTGCCGACACG
TACTATGACGCGGGAAGCAGTCTGGGGTGCGGGCGCAACATCTTTGGCGCCTATAAGCCTACAGGCTGCATGGAT
CCCGAGATATTGCTGCAGATTGCCGTCATGTACGACCAAGTCGGCGACGAAGATGAGGCCAAGGCGTACATGGAG
CTTTGTGTGGCGCAAGAGGTGGGAAGCAACTCCATGGCGGCGGCAGACGGTAGTCCCGGCGAGTCGGCCATGGCG
CGTAACGACTCACCAGGCGGATCCGACGATTATGACAACAATGGCGGCAGTGGCGACGAGGGCACAGGCGTCACT
CCAGCCACGAGCAAGGCGCGCATTTGGCTAGCCCGGCACGCAATGCGCACCGCCGACTATGTCACGGCAAACAGA
CTGGCAACTGAGCTATGCCAGGACGGCGTAGAGGTTGAGGAAGCAAAGGCCCTGGTGCGCGAAATCCGCTCCATC
TTGGACTCGACGAGTGCTGGCTTTGACTCGACTGGCTAG
Transcript >OphauG2|7985
ATGCCGCTGACACCTCAAGAGGTGGCGCAGCTGCGCATCGCTCTGCAGGATGCCGTTGTCAAATGCTCGGAGCGA
TGCCTTTATCAGTCGGCAAAATGGGCCGCCGAGCTGCTCAATGCATTGCCAGAAGCAGACACTCGCGATGCAGAA
GGCGACGCCGATTTGTATTCGGGCTACATGTCCCCATTGATCTCGCCCAACTCGGACCCGGAAGAGGCGGCCCTC
GAGGCTCAGGAAGTGGGCAAATACCTCTTGGCCAAGTCGTTTTTTGACTGCAAAGAATTCGATCGCTGCGCCGCG
GTTTTCCTGCCCGAAACGCTGCTCTCGGCAGTTCTGGAATCACATACGGTGGATCCGACGCCGGCGGCAACGACG
ACGACGGCAACGACATCGACATCGACATCGACACAAAAAGACAAGGCCAAGGCCAAGGCTCCAGATGCGGACCCA
AGCTTGTCGAGCAAGCGCCCCCTGCCGCGAATCAGCCAAAAGAGCTTATTCATCGCCCTCTATGCCAAGTTTATG
TCTGGCGAAAAGAGTAAATACGAAGAGTCGGAAATGGTTATGGGCCCGCAAGACGTGGGCACCGTCGTCAACAAG
CAGCTTTTGCCTGTTGGACGCTACTTGGCTGCCTGGTTTGCCGAGAGGACAAATGATGATGGCGACTCCCCGGCT
AATCAGGGCTGGCTAGAGTACTTATACGGCATGGTCCTTGCCAAAGAGAAGAATGATGCCAAGGCGCTCGAGTTG
CTGATAAGAAGCGTACACAAGATCCCCATGAACTGGGGCTGCTGGCTCGAGATGGCTTCACTCATTTCCAGGGTT
GAAGAGTTGAATAAGGTGTTGAAGCACTGCCCGCAGAACATTGTCGCCTTCATGTTCCATCTACACATGGCACTC
GAGTTGTACCAGCAGTCTTCCAGCCTGGCAGTCAACCTGGAGAAGCTGCTATGCATCTTTCCAACTTCGTCCTTT
CTCCTGAGCTGCAATGCGCTGCTAGCATACCACGCAAAGGATCTAATTGCTGCCGAACAACAATTCAGCCAGCTG
CTGGCTCTCCACCCCCACAGACTTGACTCGCTGGACCATTACTCCAACATACTCTACATTCTGAACCGCCGGCCG
AAATTGGCCTTTCTGGCACAGCTCTGCTCTAGCGTGGACAAGTTTCGGCCAGAGTCGTGCGTTGTTATTGGAAAC
TACTACTCGCTGTTGTCGATGCACGAGAAGGCAGTTCAGTTCTTCCGCAGAGCCCTGACGCTGGACCGGACCTGT
CTTTCAGCCTGGACCTTGATGGGCCACGAATACGTGGAGCTCAAGAACACACACGCCGCCATTGAGTCGTATCGG
CGGGCGGTTGATGTCAACCGACGAGACTACCGGGCCTGGTATGGGCTCGGGCAGACATACGAGATGCTGGAAATG
CACGCATATGCCCTCTGGTACTACAAAAAGGCGGCTGGTCTACGGCCGTGGGACGGCAAGATGTGGCTGGCTGTG
GGCACGTGCATGCAAAAGATGGGGCGGGAGCGAGACGGCATCAAGGCGCTCAAACGCGCGCTGCTTGCCGACACG
TACTATGACGCGGGAAGCAGTCTGGGGTGCGGGCGCAACATCTTTGGCGCCTATAAGCCTACAGGCTGCATGGAT
CCCGAGATATTGCTGCAGATTGCCGTCATGTACGACCAAGTCGGCGACGAAGATGAGGCCAAGGCGTACATGGAG
CTTTGTGTGGCGCAAGAGGTGGGAAGCAACTCCATGGCGGCGGCAGACGGTAGTCCCGGCGAGTCGGCCATGGCG
CGTAACGACTCACCAGGCGGATCCGACGATTATGACAACAATGGCGGCAGTGGCGACGAGGGCACAGGCGTCACT
CCAGCCACGAGCAAGGCGCGCATTTGGCTAGCCCGGCACGCAATGCGCACCGCCGACTATGTCACGGCAAACAGA
CTGGCAACTGAGCTATGCCAGGACGGCGTAGAGGTTGAGGAAGCAAAGGCCCTGGTGCGCGAAATCCGCTCCATC
TTGGACTCGACGAGTGCTGGCTTTGACTCGACTGGCTAG
Gene >OphauG2|7985
ATGCCGCTGACACCTCAAGAGGTGGCGCAGCTGCGCATCGCTCTGCAGGATGCCGTTGTCAAATGCTCGGAGCGA
TGCCTTTATCAGTCGGCAAAATGGTACATGGCAGTTGTTGTCTTGGTCATGGAACCCAAGGGAGCTGATGGCTTT
ACAGGGCCGCCGAGCTGCTCAATGCATTGCCAGAAGCAGACACTCGCGATGCAGAAGGCGACGCCGATTTGTATT
CGGGCTACATGTCCCCATTGATCTCGCCCAACTCGGACCCGGAAGAGGCGGCCCTCGAGGCTCAGGAAGTGGGCA
AATACCTCTTGGCCAAGTCGTTTTTTGACTGCAAAGAATTCGATCGCTGCGCCGCGGTTTTCCTGCCCGAAACGC
TGCTCTCGGCAGTTCTGGAATCACATACGGTGGATCCGACGCCGGCGGCAACGACGACGACGGCAACGACATCGA
CATCGACATCGACACAAAAAGACAAGGCCAAGGCCAAGGCTCCAGATGCGGACCCAAGCTTGTCGAGCAAGCGCC
CCCTGCCGCGAATCAGCCAAAAGAGCTTATTCATCGCCCTCTATGCCAAGTTTATGTCTGGCGAAAAGAGTAAAT
ACGAAGAGTCGGAAATGGTTATGGGCCCGCAAGACGTGGGCACCGTCGTCAACAAGCAGCTTTTGCCTGTTGGAC
GCTACTTGGCTGCCTGGTTTGCCGAGAGGACAAATGATGATGGCGACTCCCCGGCTAATCAGGGCTGGCTAGAGT
ACTTGTATGGCATCTTGTCTATATGCTGCATTGCTTGGAACCTCACCAGCTGACGGCCCTGTTTCAGATACGGCA
TGGTCCTTGCCAAAGAGAAGAATGATGCCAAGGCGCTCGAGTTGCTGATAAGAAGCGTACACAAGATCCCCATGA
ACTGGGGCTGCTGGCTCGAGATGGCTTCACTCATTTCCAGGGTTGAAGAGGTAAGTTGGGAGCGCCTCACGGCTG
TTGAGTACAAGGCTGATAACGATCGCGCAGTTGAATAAGGTGTTGAAGCACTGCCCGCAGAACATTGTCGCCTTC
ATGTTCCATCTACACATGGCACTCGAGTTGTACCAGCAGTCTTCCAGCCTGGCAGTCAACCTGGAGAAGCTGCTA
TGCATCTTTCCAACTTCGTCCTTTCTCCTGAGCTGCAATGCGCTGCTAGCATACCACGCAAAGGATCTAATTGCT
GCCGAACAACAATTCAGCCAGCTGCTGGCTCTCCACCCCCACAGACTTGACTCGCTGGACCATTACTCCAACATA
CTCTACATTCTGAACCGCCGGCCGAAATTGGCCTTTCTGGCACAGCTCTGCTCTAGCGTGGACAAGTTTCGGCCA
GAGTCGTGCGTTGTTATTGGAAACTACTACTCGCTGTTGTCGATGCACGAGAAGGCAGTTCAGTTCTTCCGCAGA
GCCCTGACGCTGGACCGGACCTGTCTTTCAGCCTGGACCTTGATGGGCCACGAATACGTGGAGCTCAAGAACACA
CACGCCGCCATTGAGTCGTATCGGCGGGCGGTTGATGTCAACCGACGAGACTACCGGGCCTGGTATGGGCTCGGG
CAGACATACGAGATGCTGGAAATGCACGCATATGCCCTCTGGTACTACAAAAAGGCGGCTGGTCTACGGCCGTGG
GACGGCAAGATGTGGCTGGCTGTGGGCACGTGCATGCAAAAGATGGGGCGGGAGCGAGACGGCATCAAGGCGCTC
AAACGCGCGCTGCTTGCCGACACGTACTATGACGCGGGAAGCAGTCTGGGGTGCGGGCGCAACATCTTTGGCGCC
TATAAGCCTACAGGCTGCATGGATCCCGAGATATTGCTGCAGATTGCCGTCATGTACGACCAAGTCGGCGACGAA
GATGAGGCCAAGGCGTACATGGAGCTTTGTGTGGCGCAAGAGGTGGGAAGCAACTCCATGGCGGCGGCAGACGGT
AGTCCCGGCGAGTCGGCCATGGCGCGTAACGACTCACCAGGCGGATCCGACGATTATGACAACAATGGCGGCAGT
GGCGACGAGGGCACAGGCGTCACTCCAGCCACGAGCAAGGCGCGCATTTGGCTAGCCCGGCACGCAATGCGCACC
GCCGACTATGTCACGGCAAACAGACTGGCAACTGAGCTATGCCAGGACGGCGTAGAGGTTGAGGAAGCAAAGGCC
CTGGTGCGCGAAATCCGCTCCATCTTGGACTCGACGAGTGCTGGCTTTGACTCGACTGGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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