© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | OphauG2|7947 |
| Gene name | |
| Location | Contig_982:3622..4156 |
| Strand | - |
| Gene length (bp) | 534 |
| Transcript length (bp) | 534 |
| Coding sequence length (bp) | 534 |
| Protein length (aa) | 178 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01284 | MARVEL | Membrane-associating domain | 4.9E-23 | 6 | 145 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q12207|NCE2_YEAST | Non-classical export protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NCE102 PE=1 SV=1 | 9 | 175 | 8.0E-19 |
| sp|Q5ANE3|NCE2_CANAL | Non-classical export protein 102 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=NCE102 PE=1 SV=1 | 6 | 175 | 1.0E-15 |
| sp|P53279|FHN1_YEAST | Non-classical export protein 2 homolog 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FHN1 PE=1 SV=1 | 19 | 175 | 4.0E-15 |
| sp|O74333|NCE2_SCHPO | Non-classical export protein 2 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fhn1 PE=3 SV=1 | 9 | 152 | 2.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0005575 | cellular_component | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 30 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| 2 | 39 | 61 | 22 |
| 3 | 68 | 90 | 22 |
| 4 | 125 | 147 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|7947 MSTVINICIRAFALLWTLLITALIGNVIASNRDGSMSAINYAMFVAALSWVVSLYGIGSALMTSIASPIVMVVLD ALTLIFSLVSAIVLAAKLRAVDCGNLSLEHLPSNWIALGSKSVVKRCREVQASTAFMWFLFACFCASLFFSIMES QSGGGLGGLSLGRRKGASKPSMSQVAA* |
| Coding | >OphauG2|7947 ATGTCGACTGTCATCAACATCTGCATTCGGGCCTTTGCCCTTCTCTGGACTCTGCTCATCACGGCCCTTATTGGA AATGTCATTGCTAGCAACAGAGACGGGTCCATGTCGGCCATCAACTACGCCATGTTCGTCGCCGCCCTGTCGTGG GTTGTCTCGCTCTACGGAATTGGCTCGGCATTGATGACTTCGATTGCCTCGCCAATTGTCATGGTGGTTCTCGAT GCTCTGACGTTGATCTTTTCCCTCGTCTCCGCCATTGTCCTTGCTGCAAAGCTGCGCGCTGTCGACTGCGGCAAC CTCTCTCTGGAACACCTTCCCTCCAACTGGATCGCTCTTGGCTCCAAAAGCGTCGTCAAGCGCTGTCGCGAGGTT CAGGCCAGCACCGCCTTCATGTGGTTTCTCTTTGCCTGCTTTTGCGCCTCTCTCTTCTTCTCCATCATGGAATCC CAGAGTGGAGGCGGCCTTGGCGGCCTCAGCCTCGGCCGCCGCAAAGGCGCTTCCAAGCCCAGCATGTCTCAGGTT GCTGCGTAA |
| Transcript | >OphauG2|7947 ATGTCGACTGTCATCAACATCTGCATTCGGGCCTTTGCCCTTCTCTGGACTCTGCTCATCACGGCCCTTATTGGA AATGTCATTGCTAGCAACAGAGACGGGTCCATGTCGGCCATCAACTACGCCATGTTCGTCGCCGCCCTGTCGTGG GTTGTCTCGCTCTACGGAATTGGCTCGGCATTGATGACTTCGATTGCCTCGCCAATTGTCATGGTGGTTCTCGAT GCTCTGACGTTGATCTTTTCCCTCGTCTCCGCCATTGTCCTTGCTGCAAAGCTGCGCGCTGTCGACTGCGGCAAC CTCTCTCTGGAACACCTTCCCTCCAACTGGATCGCTCTTGGCTCCAAAAGCGTCGTCAAGCGCTGTCGCGAGGTT CAGGCCAGCACCGCCTTCATGTGGTTTCTCTTTGCCTGCTTTTGCGCCTCTCTCTTCTTCTCCATCATGGAATCC CAGAGTGGAGGCGGCCTTGGCGGCCTCAGCCTCGGCCGCCGCAAAGGCGCTTCCAAGCCCAGCATGTCTCAGGTT GCTGCGTAA |
| Gene | >OphauG2|7947 ATGTCGACTGTCATCAACATCTGCATTCGGGCCTTTGCCCTTCTCTGGACTCTGCTCATCACGGCCCTTATTGGA AATGTCATTGCTAGCAACAGAGACGGGTCCATGTCGGCCATCAACTACGCCATGTTCGTCGCCGCCCTGTCGTGG GTTGTCTCGCTCTACGGAATTGGCTCGGCATTGATGACTTCGATTGCCTCGCCAATTGTCATGGTGGTTCTCGAT GCTCTGACGTTGATCTTTTCCCTCGTCTCCGCCATTGTCCTTGCTGCAAAGCTGCGCGCTGTCGACTGCGGCAAC CTCTCTCTGGAACACCTTCCCTCCAACTGGATCGCTCTTGGCTCCAAAAGCGTCGTCAAGCGCTGTCGCGAGGTT CAGGCCAGCACCGCCTTCATGTGGTTTCTCTTTGCCTGCTTTTGCGCCTCTCTCTTCTTCTCCATCATGGAATCC CAGAGTGGAGGCGGCCTTGGCGGCCTCAGCCTCGGCCGCCGCAAAGGCGCTTCCAAGCCCAGCATGTCTCAGGTT GCTGCGTAA |