Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|7920
Gene name
LocationContig_978:91..938
Strand+
Gene length (bp)847
Transcript length (bp)759
Coding sequence length (bp)759
Protein length (aa) 253

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04072 LCM Leucine carboxyl methyltransferase 4.4E-09 13 127

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q4ICG8|LCMT1_GIBZE Leucine carboxyl methyltransferase 1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=PPM1 PE=3 SV=1 12 242 4.0E-68
sp|Q7SAP7|LCMT1_NEUCR Leucine carboxyl methyltransferase 1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=ppm-1 PE=3 SV=2 12 236 1.0E-45
sp|Q5AQJ2|LCMT1_EMENI Leucine carboxyl methyltransferase 1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=ppm1 PE=3 SV=2 12 244 1.0E-39
sp|Q4WS57|LCMT1_ASPFU Leucine carboxyl methyltransferase 1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=ppm1 PE=3 SV=1 28 240 8.0E-34
sp|O94257|LCMT1_SCHPO Leucine carboxyl methyltransferase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ppm1 PE=3 SV=1 12 238 4.0E-30
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Swissprot ID Swissprot Description Start End E-value
sp|Q4ICG8|LCMT1_GIBZE Leucine carboxyl methyltransferase 1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=PPM1 PE=3 SV=1 12 242 4.0E-68
sp|Q7SAP7|LCMT1_NEUCR Leucine carboxyl methyltransferase 1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=ppm-1 PE=3 SV=2 12 236 1.0E-45
sp|Q5AQJ2|LCMT1_EMENI Leucine carboxyl methyltransferase 1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=ppm1 PE=3 SV=2 12 244 1.0E-39
sp|Q4WS57|LCMT1_ASPFU Leucine carboxyl methyltransferase 1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=ppm1 PE=3 SV=1 28 240 8.0E-34
sp|O94257|LCMT1_SCHPO Leucine carboxyl methyltransferase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ppm1 PE=3 SV=1 12 238 4.0E-30
sp|Q6BQD2|LCMT1_DEBHA Leucine carboxyl methyltransferase 1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=PPM1 PE=3 SV=2 12 233 7.0E-30
sp|Q6C997|LCMT1_YARLI Leucine carboxyl methyltransferase 1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=PPM1 PE=3 SV=1 12 238 4.0E-27
sp|Q5XIA3|TYW4_RAT tRNA wybutosine-synthesizing protein 4 OS=Rattus norvegicus GN=Lcmt2 PE=2 SV=1 27 247 6.0E-24
sp|Q5A387|LCMT1_CANAL Leucine carboxyl methyltransferase 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PPM1 PE=3 SV=1 12 234 3.0E-22
sp|Q9UIC8|LCMT1_HUMAN Leucine carboxyl methyltransferase 1 OS=Homo sapiens GN=LCMT1 PE=1 SV=2 30 236 6.0E-20
sp|O60294|TYW4_HUMAN tRNA wybutosine-synthesizing protein 4 OS=Homo sapiens GN=LCMT2 PE=1 SV=3 32 242 4.0E-19
sp|Q8BYR1|TYW4_MOUSE tRNA wybutosine-synthesizing protein 4 OS=Mus musculus GN=Lcmt2 PE=2 SV=4 32 236 2.0E-18
sp|Q04081|LCMT1_YEAST Leucine carboxyl methyltransferase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PPM1 PE=1 SV=1 12 234 2.0E-18
sp|Q759U5|LCMT1_ASHGO Leucine carboxyl methyltransferase 1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=PPM1 PE=3 SV=2 12 235 3.0E-18
sp|Q6P4Z6|LCMT1_RAT Leucine carboxyl methyltransferase 1 OS=Rattus norvegicus GN=Lcmt1 PE=2 SV=1 30 236 6.0E-18
sp|Q3T0H0|LCMT1_BOVIN Leucine carboxyl methyltransferase 1 OS=Bos taurus GN=LCMT1 PE=2 SV=1 26 239 9.0E-18
sp|P46554|LCMT1_CAEEL Probable leucine carboxyl methyltransferase 1 OS=Caenorhabditis elegans GN=B0285.4 PE=3 SV=1 13 234 1.0E-17
sp|P0CO56|LCMT1_CRYNJ Leucine carboxyl methyltransferase 1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=PPM1 PE=3 SV=1 12 236 3.0E-17
sp|P0CO57|LCMT1_CRYNB Leucine carboxyl methyltransferase 1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=PPM1 PE=3 SV=1 12 236 3.0E-17
sp|Q6FUI5|LCMT1_CANGA Leucine carboxyl methyltransferase 1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=PPM1 PE=3 SV=1 12 233 1.0E-16
sp|Q60YU0|LCMT1_CAEBR Probable leucine carboxyl methyltransferase 1 OS=Caenorhabditis briggsae GN=CBG18087 PE=3 SV=1 30 234 1.0E-16
sp|Q75AW4|TYW4_ASHGO tRNA wybutosine-synthesizing protein 4 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=PPM2 PE=3 SV=1 27 246 6.0E-13
sp|Q6CWW0|LCMT1_KLULA Leucine carboxyl methyltransferase 1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=PPM1 PE=3 SV=1 12 231 3.0E-11
sp|Q6FXA5|TYW4_CANGA tRNA wybutosine-synthesizing protein 4 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=PPM2 PE=3 SV=1 27 237 9.0E-11
sp|Q4IER0|TYW4_GIBZE tRNA wybutosine-synthesizing protein 4 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=PPM2 PE=3 SV=1 32 235 1.0E-09
sp|Q6C3P4|TYW4_YARLI tRNA wybutosine-synthesizing protein 4 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=PPM2 PE=3 SV=1 28 237 1.0E-06
sp|Q5BH52|TYW4_EMENI tRNA wybutosine-synthesizing protein 4 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=ppm2 PE=3 SV=3 27 235 9.0E-06
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GO

GO Term Description Terminal node
GO:0032259 methylation Yes
GO:0008168 methyltransferase activity Yes
GO:0003674 molecular_function No
GO:0016740 transferase activity No
GO:0016741 transferase activity, transferring one-carbon groups No
GO:0003824 catalytic activity No
GO:0008152 metabolic process No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|7920
MAMSVRSRHLCTDTRPLRLLGRRPGPRLTYHEIDFEATCRHKLAVVRGTPQLASRLRQIEEAASGSWTAQSEHGD
TYYCHAADLRSLDHGAASASLLASLRTNAPTLVVSECCLCYLTHLEAERAIAFFCSRIARLAIVIYEPMPLGDAF
GTVMLSNLRARNIFMPSVEHYNNGPGQECRLRHAGFSRVGHMTMDAAWQLLVPAAEKDRLARLEGLDELEEWNLL
AAHYIVAWASRDTSLGHLDQYLSLAKE*
Coding >OphauG2|7920
ATGGCAATGTCTGTCCGCTCAAGGCACCTATGCACAGACACCAGACCCCTTCGCCTACTTGGGCGTCGTCCCGGT
CCGCGACTGACATACCACGAAATCGACTTTGAAGCGACGTGCAGACACAAGCTGGCCGTGGTGCGAGGCACACCC
CAGCTGGCCAGTCGGCTGCGCCAGATTGAAGAGGCGGCTAGCGGCTCGTGGACGGCGCAGAGCGAACACGGCGAC
ACGTACTACTGCCATGCCGCCGACCTGCGCTCCCTTGACCACGGCGCTGCGTCGGCCTCGCTGCTCGCCTCGCTG
CGAACCAATGCGCCTACGCTCGTCGTGTCCGAGTGCTGCCTGTGCTACCTGACGCACCTCGAGGCCGAGCGCGCC
ATTGCCTTTTTCTGCTCGCGCATTGCCCGCCTGGCCATTGTCATCTACGAGCCCATGCCTCTCGGTGATGCCTTT
GGCACCGTGATGCTGTCCAATCTACGCGCTCGCAACATTTTCATGCCCAGCGTCGAGCACTACAATAACGGCCCT
GGCCAGGAGTGCCGTCTGCGCCACGCCGGCTTCTCCAGAGTCGGCCACATGACAATGGACGCTGCCTGGCAACTC
TTGGTGCCCGCAGCGGAAAAGGACCGTCTGGCGCGGCTCGAGGGGCTCGATGAGCTTGAGGAATGGAACCTCTTG
GCCGCCCACTACATTGTAGCCTGGGCCTCTCGAGACACCAGTCTTGGCCATTTGGACCAGTACCTGTCTCTGGCC
AAGGAGTAG
Transcript >OphauG2|7920
ATGGCAATGTCTGTCCGCTCAAGGCACCTATGCACAGACACCAGACCCCTTCGCCTACTTGGGCGTCGTCCCGGT
CCGCGACTGACATACCACGAAATCGACTTTGAAGCGACGTGCAGACACAAGCTGGCCGTGGTGCGAGGCACACCC
CAGCTGGCCAGTCGGCTGCGCCAGATTGAAGAGGCGGCTAGCGGCTCGTGGACGGCGCAGAGCGAACACGGCGAC
ACGTACTACTGCCATGCCGCCGACCTGCGCTCCCTTGACCACGGCGCTGCGTCGGCCTCGCTGCTCGCCTCGCTG
CGAACCAATGCGCCTACGCTCGTCGTGTCCGAGTGCTGCCTGTGCTACCTGACGCACCTCGAGGCCGAGCGCGCC
ATTGCCTTTTTCTGCTCGCGCATTGCCCGCCTGGCCATTGTCATCTACGAGCCCATGCCTCTCGGTGATGCCTTT
GGCACCGTGATGCTGTCCAATCTACGCGCTCGCAACATTTTCATGCCCAGCGTCGAGCACTACAATAACGGCCCT
GGCCAGGAGTGCCGTCTGCGCCACGCCGGCTTCTCCAGAGTCGGCCACATGACAATGGACGCTGCCTGGCAACTC
TTGGTGCCCGCAGCGGAAAAGGACCGTCTGGCGCGGCTCGAGGGGCTCGATGAGCTTGAGGAATGGAACCTCTTG
GCCGCCCACTACATTGTAGCCTGGGCCTCTCGAGACACCAGTCTTGGCCATTTGGACCAGTACCTGTCTCTGGCC
AAGGAGTAG
Gene >OphauG2|7920
ATGGCAATGTCTGTCCGCTCAAGGCACCTATGTGCGCACACAGGCCCTCGACTTGACAATTGCCGGCTTCCTCTC
CCACGACGCCGGCCGCGACAAGCAAATCATATCGCTGGGCGCAGGCACAGACACCAGACCCCTTCGCCTACTTGG
GCGTCGTCCCGGTCCGCGACTGACATACCACGAAATCGACTTTGAAGCGACGTGCAGACACAAGCTGGCCGTGGT
GCGAGGCACACCCCAGCTGGCCAGTCGGCTGCGCCAGATTGAAGAGGCGGCTAGCGGCTCGTGGACGGCGCAGAG
CGAACACGGCGACACGTACTACTGCCATGCCGCCGACCTGCGCTCCCTTGACCACGGCGCTGCGTCGGCCTCGCT
GCTCGCCTCGCTGCGAACCAATGCGCCTACGCTCGTCGTGTCCGAGTGCTGCCTGTGCTACCTGACGCACCTCGA
GGCCGAGCGCGCCATTGCCTTTTTCTGCTCGCGCATTGCCCGCCTGGCCATTGTCATCTACGAGCCCATGCCTCT
CGGTGATGCCTTTGGCACCGTGATGCTGTCCAATCTACGCGCTCGCAACATTTTCATGCCCAGCGTCGAGCACTA
CAATAACGGCCCTGGCCAGGAGTGCCGTCTGCGCCACGCCGGCTTCTCCAGAGTCGGCCACATGACAATGGACGC
TGCCTGGCAACTCTTGGTGCCCGCAGCGGAAAAGGACCGTCTGGCGCGGCTCGAGGGGCTCGATGAGCTTGAGGA
ATGGAACCTCTTGGCCGCCCACTACATTGTAGCCTGGGCCTCTCGAGACACCAGTCTTGGCCATTTGGACCAGTA
CCTGTCTCTGGCCAAGGAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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