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| Protein ID | OphauG2|7918 |
| Gene name | |
| Location | Contig_977:4470..5314 |
| Strand | + |
| Gene length (bp) | 844 |
| Transcript length (bp) | 687 |
| Coding sequence length (bp) | 687 |
| Protein length (aa) | 229 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF12352 | V-SNARE_C | Snare region anchored in the vesicle membrane C-terminus | 4.3E-13 | 141 | 205 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P38736|GOSR1_YEAST | Golgi SNAP receptor complex member 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GOS1 PE=1 SV=1 | 1 | 226 | 3.0E-32 |
| sp|O95249|GOSR1_HUMAN | Golgi SNAP receptor complex member 1 OS=Homo sapiens GN=GOSR1 PE=1 SV=1 | 3 | 224 | 5.0E-20 |
| sp|O88630|GOSR1_MOUSE | Golgi SNAP receptor complex member 1 OS=Mus musculus GN=Gosr1 PE=1 SV=2 | 3 | 224 | 6.0E-20 |
| sp|Q62931|GOSR1_RAT | Golgi SNAP receptor complex member 1 OS=Rattus norvegicus GN=Gosr1 PE=1 SV=1 | 3 | 224 | 6.0E-20 |
| sp|O08522|GOSR1_CRIGR | Golgi SNAP receptor complex member 1 OS=Cricetulus griseus GN=GOSR1 PE=1 SV=1 | 3 | 224 | 8.0E-20 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P38736|GOSR1_YEAST | Golgi SNAP receptor complex member 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GOS1 PE=1 SV=1 | 1 | 226 | 3.0E-32 |
| sp|O95249|GOSR1_HUMAN | Golgi SNAP receptor complex member 1 OS=Homo sapiens GN=GOSR1 PE=1 SV=1 | 3 | 224 | 5.0E-20 |
| sp|O88630|GOSR1_MOUSE | Golgi SNAP receptor complex member 1 OS=Mus musculus GN=Gosr1 PE=1 SV=2 | 3 | 224 | 6.0E-20 |
| sp|Q62931|GOSR1_RAT | Golgi SNAP receptor complex member 1 OS=Rattus norvegicus GN=Gosr1 PE=1 SV=1 | 3 | 224 | 6.0E-20 |
| sp|O08522|GOSR1_CRIGR | Golgi SNAP receptor complex member 1 OS=Cricetulus griseus GN=GOSR1 PE=1 SV=1 | 3 | 224 | 8.0E-20 |
| sp|Q5RBL6|GOSR1_PONAB | Golgi SNAP receptor complex member 1 OS=Pongo abelii GN=GOSR1 PE=2 SV=1 | 3 | 224 | 8.0E-20 |
| sp|Q2TBU3|GOSR1_BOVIN | Golgi SNAP receptor complex member 1 OS=Bos taurus GN=GOSR1 PE=2 SV=1 | 3 | 224 | 4.0E-19 |
| sp|Q9LMP7|GOS11_ARATH | Golgi SNAP receptor complex member 1-1 OS=Arabidopsis thaliana GN=GOS11 PE=2 SV=1 | 8 | 227 | 1.0E-18 |
| sp|O22151|GOS12_ARATH | Golgi SNAP receptor complex member 1-2 OS=Arabidopsis thaliana GN=GOS12 PE=1 SV=2 | 49 | 227 | 2.0E-16 |
| sp|Q9VE50|GOSR1_DROME | Golgi SNAP receptor complex member 1 OS=Drosophila melanogaster GN=Gos28 PE=2 SV=1 | 6 | 226 | 1.0E-11 |
| sp|Q09835|GOS1_SCHPO | Protein transport protein gos1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gos1 PE=3 SV=1 | 71 | 227 | 1.0E-09 |
| sp|A8XLW0|GOSR1_CAEBR | Golgi SNAP receptor complex member 1 OS=Caenorhabditis briggsae GN=gos-28 PE=3 SV=1 | 7 | 225 | 2.0E-09 |
| sp|Q95ZW1|GOSR1_CAEEL | Golgi SNAP receptor complex member 1 OS=Caenorhabditis elegans GN=gos-28 PE=2 SV=1 | 7 | 225 | 3.0E-08 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 210 | 227 | 17 |
| Orthofinder run ID | 4 |
| Orthogroup | 5222 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|7918 MSASPGSTSWGQLRQLARTLESQTENLFHTYSQFSAAASIAQKPTNEEREAETKIEELLEKRESVISQISQLLES EASLTASAVKQNNLSLLREKLSGHRRDLGRLRGTLQQARDRANLLSNVRSDIDEYRAKNPEAAEAEYMLDERSRI DNSHNMADSVLSQAYAVNDSFILQRETLASINRRITMAASKVPGINSLIGRISAKKRRDGIIMGCFIAMCVIVFW WLL* |
| Coding | >OphauG2|7918 ATGTCGGCCTCGCCAGGAAGCACGAGCTGGGGTCAGCTGCGGCAACTGGCCAGGACGCTCGAGTCTCAGACGGAG AATCTTTTCCATACCTATTCACAATTCTCAGCAGCCGCAAGCATCGCCCAAAAGCCGACAAACGAGGAACGAGAA GCCGAAACCAAGATTGAAGAGTTGCTGGAAAAGCGCGAATCTGTCATTTCACAGATTTCGCAGCTGCTTGAATCA GAAGCCTCGCTCACTGCGTCCGCGGTCAAGCAGAACAATCTGTCCTTGTTGCGCGAGAAGCTGTCAGGGCATAGA AGAGACTTGGGCCGCTTGCGTGGAACTTTGCAACAAGCCCGCGACCGGGCCAACCTGCTCAGCAATGTGCGGTCT GACATTGATGAATATCGGGCCAAGAATCCAGAAGCGGCCGAGGCGGAATACATGCTCGACGAGCGCAGCCGCATT GATAACAGTCACAACATGGCCGACAGTGTGTTGAGCCAGGCTTACGCCGTCAATGATAGCTTCATTCTGCAAAGA GAGACCCTAGCAAGCATTAATCGACGCATCACAATGGCTGCCAGTAAGGTCCCTGGTATCAACAGCCTGATCGGC AGAATATCCGCCAAGAAGAGAAGAGACGGCATCATCATGGGGTGCTTTATTGCAATGTGCGTCATTGTGTTTTGG TGGCTCCTATAG |
| Transcript | >OphauG2|7918 ATGTCGGCCTCGCCAGGAAGCACGAGCTGGGGTCAGCTGCGGCAACTGGCCAGGACGCTCGAGTCTCAGACGGAG AATCTTTTCCATACCTATTCACAATTCTCAGCAGCCGCAAGCATCGCCCAAAAGCCGACAAACGAGGAACGAGAA GCCGAAACCAAGATTGAAGAGTTGCTGGAAAAGCGCGAATCTGTCATTTCACAGATTTCGCAGCTGCTTGAATCA GAAGCCTCGCTCACTGCGTCCGCGGTCAAGCAGAACAATCTGTCCTTGTTGCGCGAGAAGCTGTCAGGGCATAGA AGAGACTTGGGCCGCTTGCGTGGAACTTTGCAACAAGCCCGCGACCGGGCCAACCTGCTCAGCAATGTGCGGTCT GACATTGATGAATATCGGGCCAAGAATCCAGAAGCGGCCGAGGCGGAATACATGCTCGACGAGCGCAGCCGCATT GATAACAGTCACAACATGGCCGACAGTGTGTTGAGCCAGGCTTACGCCGTCAATGATAGCTTCATTCTGCAAAGA GAGACCCTAGCAAGCATTAATCGACGCATCACAATGGCTGCCAGTAAGGTCCCTGGTATCAACAGCCTGATCGGC AGAATATCCGCCAAGAAGAGAAGAGACGGCATCATCATGGGGTGCTTTATTGCAATGTGCGTCATTGTGTTTTGG TGGCTCCTATAG |
| Gene | >OphauG2|7918 ATGTCGGCCTCGCCAGGAAGCACGAGCTGGGGTCAGCTGCGGCAACTGGCCAGGACGCTCGAGTCTCAGGTAGAC GCGCCATTGTCGAAACATTGCTTCTTGACTAGTCTCCAGCTTACAAGCTCCCAGACGGAGAATCTTTTCCATACC TATTCACAATTCTCAGCAGCCGCAAGCATCGCCCAAAAGCCGACAAACGAGGAACGAGAAGCCGAAACCAAGATT GAAGAGTTGCTGGAAAAGGTCAGACTTTCTCTCTCCAAGTCATTTTCTTCGAACACGAGAAACATGCCAAGACGC CGTGTCAAGAAGCTAGTCTAATAAAGGCCATGTCGTGCAGCGCGAATCTGTCATTTCACAGATTTCGCAGCTGCT TGAATCAGAAGCCTCGCTCACTGCGTCCGCGGTCAAGCAGAACAATCTGTCCTTGTTGCGCGAGAAGCTGTCAGG GCATAGAAGAGACTTGGGCCGCTTGCGTGGAACTTTGCAACAAGCCCGCGACCGGGCCAACCTGCTCAGCAATGT GCGGTCTGACATTGATGAATATCGGGCCAAGAATCCAGAAGCGGCCGAGGCGGAATACATGCTCGACGAGCGCAG CCGCATTGATAACAGTCACAACATGGCCGACAGTGTGTTGAGCCAGGCTTACGCCGTCAATGATAGCTTCATTCT GCAAAGAGAGACCCTAGCAAGCATTAATCGACGCATCACAATGGCTGCCAGTAAGGTCCCTGGTATCAACAGCCT GATCGGCAGAATATCCGCCAAGAAGAGAAGAGACGGCATCATCATGGGGTGCTTTATTGCAATGTGCGTCATTGT GTTTTGGTGGCTCCTATAG |