Protein ID | OphauG2|7917 |
Gene name | |
Location | Contig_977:3288..4061 |
Strand | - |
Gene length (bp) | 773 |
Transcript length (bp) | 378 |
Coding sequence length (bp) | 378 |
Protein length (aa) | 126 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00831 | Ribosomal_L29 | Ribosomal L29 protein | 1.7E-16 | 9 | 64 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q8L805|RL35_WHEAT | 60S ribosomal protein L35 OS=Triticum aestivum GN=RPL35 PE=1 SV=1 | 1 | 124 | 8.0E-66 |
sp|Q6PBC1|RL35_XENTR | 60S ribosomal protein L35 OS=Xenopus tropicalis GN=rpl35 PE=2 SV=3 | 4 | 124 | 6.0E-32 |
sp|Q8JHJ1|RL35_DANRE | 60S ribosomal protein L35 OS=Danio rerio GN=rpl35 PE=2 SV=3 | 4 | 124 | 7.0E-32 |
sp|Q90YT4|RL35_ICTPU | 60S ribosomal protein L35 OS=Ictalurus punctatus GN=rpl35 PE=2 SV=3 | 4 | 124 | 1.0E-31 |
sp|Q6UZF7|RL35_HIPCM | 60S ribosomal protein L35 OS=Hippocampus comes GN=rpl35 PE=2 SV=3 | 4 | 124 | 7.0E-31 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q8L805|RL35_WHEAT | 60S ribosomal protein L35 OS=Triticum aestivum GN=RPL35 PE=1 SV=1 | 1 | 124 | 8.0E-66 |
sp|Q6PBC1|RL35_XENTR | 60S ribosomal protein L35 OS=Xenopus tropicalis GN=rpl35 PE=2 SV=3 | 4 | 124 | 6.0E-32 |
sp|Q8JHJ1|RL35_DANRE | 60S ribosomal protein L35 OS=Danio rerio GN=rpl35 PE=2 SV=3 | 4 | 124 | 7.0E-32 |
sp|Q90YT4|RL35_ICTPU | 60S ribosomal protein L35 OS=Ictalurus punctatus GN=rpl35 PE=2 SV=3 | 4 | 124 | 1.0E-31 |
sp|Q6UZF7|RL35_HIPCM | 60S ribosomal protein L35 OS=Hippocampus comes GN=rpl35 PE=2 SV=3 | 4 | 124 | 7.0E-31 |
sp|Q69CJ9|RL35_OPHHA | 60S ribosomal protein L35 OS=Ophiophagus hannah GN=RPL35 PE=2 SV=3 | 4 | 124 | 2.0E-30 |
sp|Q29361|RL35_PIG | 60S ribosomal protein L35 OS=Sus scrofa GN=RPL35 PE=1 SV=3 | 4 | 124 | 2.0E-30 |
sp|Q3MHM7|RL35_BOVIN | 60S ribosomal protein L35 OS=Bos taurus GN=RPL35 PE=2 SV=3 | 4 | 124 | 4.0E-30 |
sp|Q98TF7|RL35_CHICK | 60S ribosomal protein L35 OS=Gallus gallus GN=RPL35 PE=2 SV=3 | 4 | 124 | 5.0E-30 |
sp|Q9M3D2|RL353_ARATH | 60S ribosomal protein L35-3 OS=Arabidopsis thaliana GN=RPL35C PE=2 SV=1 | 4 | 123 | 5.0E-30 |
sp|P17078|RL35_RAT | 60S ribosomal protein L35 OS=Rattus norvegicus GN=Rpl35 PE=1 SV=3 | 4 | 124 | 5.0E-30 |
sp|Q6ZWV7|RL35_MOUSE | 60S ribosomal protein L35 OS=Mus musculus GN=Rpl35 PE=1 SV=1 | 4 | 124 | 5.0E-30 |
sp|P42766|RL35_HUMAN | 60S ribosomal protein L35 OS=Homo sapiens GN=RPL35 PE=1 SV=2 | 4 | 124 | 9.0E-30 |
sp|Q9LZ41|RL354_ARATH | 60S ribosomal protein L35-4 OS=Arabidopsis thaliana GN=RPL35D PE=2 SV=1 | 4 | 123 | 1.0E-29 |
sp|Q9SF53|RL351_ARATH | 60S ribosomal protein L35-1 OS=Arabidopsis thaliana GN=RPL35A PE=2 SV=1 | 4 | 123 | 6.0E-29 |
sp|O80626|RL352_ARATH | 60S ribosomal protein L35-2 OS=Arabidopsis thaliana GN=RPL35B PE=2 SV=1 | 4 | 123 | 6.0E-29 |
sp|Q5DVH6|RL35_PLAFE | 60S ribosomal protein L35 OS=Platichthys flesus GN=rpl35 PE=2 SV=3 | 4 | 124 | 6.0E-29 |
sp|O74904|RL35_SCHPO | 60S ribosomal protein L35 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpl35 PE=1 SV=1 | 6 | 124 | 2.0E-28 |
sp|Q9M5L0|RL35_EUPES | 60S ribosomal protein L35 OS=Euphorbia esula GN=RPL35 PE=2 SV=1 | 4 | 124 | 4.0E-28 |
sp|P0CX85|RL35B_YEAST | 60S ribosomal protein L35-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPL35B PE=1 SV=1 | 6 | 124 | 9.0E-27 |
sp|P0CX84|RL35A_YEAST | 60S ribosomal protein L35-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPL35A PE=1 SV=1 | 6 | 124 | 9.0E-27 |
sp|P34662|RL35_CAEEL | 60S ribosomal protein L35 OS=Caenorhabditis elegans GN=rpl-35 PE=3 SV=1 | 4 | 124 | 3.0E-23 |
sp|Q54J23|RL35_DICDI | 60S ribosomal protein L35 OS=Dictyostelium discoideum GN=rpl35 PE=3 SV=1 | 5 | 124 | 3.0E-23 |
sp|P0DJ51|RL35_TETTS | 60S ribosomal protein L35 OS=Tetrahymena thermophila (strain SB210) GN=RPL35 PE=1 SV=1 | 6 | 124 | 7.0E-22 |
sp|P52817|RL35_BABBO | 60S ribosomal protein L35 OS=Babesia bovis GN=RPL35 PE=2 SV=1 | 4 | 122 | 9.0E-18 |
sp|Q4UIF8|RL35_THEAN | 60S ribosomal protein L35 OS=Theileria annulata GN=RPL35 PE=3 SV=1 | 3 | 124 | 7.0E-12 |
sp|Q2VA69|RL36_THELE | 60S ribosomal protein L35 OS=Theileria lestoquardi GN=RPL35 PE=2 SV=1 | 5 | 124 | 2.0E-11 |
sp|Q4N756|RL35_THEPA | 60S ribosomal protein L35 OS=Theileria parva GN=RPL35 PE=3 SV=1 | 29 | 122 | 6.0E-11 |
sp|A5UL82|RL29_METS3 | 50S ribosomal protein L29P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl29p PE=3 SV=1 | 6 | 67 | 3.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0003735 | structural constituent of ribosome | Yes |
GO:0005840 | ribosome | Yes |
GO:0006412 | translation | Yes |
GO:0008152 | metabolic process | No |
GO:0043228 | non-membrane-bounded organelle | No |
GO:0043603 | cellular amide metabolic process | No |
GO:0043229 | intracellular organelle | No |
GO:0009059 | macromolecule biosynthetic process | No |
GO:1901576 | organic substance biosynthetic process | No |
GO:0005198 | structural molecule activity | No |
GO:0009058 | biosynthetic process | No |
GO:0009987 | cellular process | No |
GO:0008150 | biological_process | No |
GO:1901566 | organonitrogen compound biosynthetic process | No |
GO:0044238 | primary metabolic process | No |
GO:0043226 | organelle | No |
GO:0019538 | protein metabolic process | No |
GO:0034645 | cellular macromolecule biosynthetic process | No |
GO:0034641 | cellular nitrogen compound metabolic process | No |
GO:0005575 | cellular_component | No |
GO:0043170 | macromolecule metabolic process | No |
GO:0006807 | nitrogen compound metabolic process | No |
GO:0006518 | peptide metabolic process | No |
GO:0071704 | organic substance metabolic process | No |
GO:0043604 | amide biosynthetic process | No |
GO:0044271 | cellular nitrogen compound biosynthetic process | No |
GO:0044249 | cellular biosynthetic process | No |
GO:0043232 | intracellular non-membrane-bounded organelle | No |
GO:0003674 | molecular_function | No |
GO:0110165 | cellular anatomical entity | No |
GO:0044260 | cellular macromolecule metabolic process | No |
GO:1901564 | organonitrogen compound metabolic process | No |
GO:0044237 | cellular metabolic process | No |
GO:0043043 | peptide biosynthetic process | No |
Orthofinder run ID | 4 |
Orthogroup | 5219 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauG2|7917 MSTSKVKTSQLWDKNKDDLLKQLVELKTELGQLRVQKVASSGTKLNRIHDLRKSIARVLTIVKSKQRAQLRLFYK NKKYAPLDLRPKKTRAIRRRLSPQDSARVLEKVKKRNSHFCQRKFAIKAA* |
Coding | >OphauG2|7917 ATGTCGACGAGCAAAGTCAAGACCTCCCAGTTATGGGACAAGAATAAGGACGACCTATTGAAGCAACTCGTTGAG CTCAAGACGGAACTCGGCCAGCTTCGCGTCCAAAAGGTCGCGTCATCAGGCACCAAATTGAATAGAATCCATGAT TTACGAAAATCGATTGCCCGTGTCTTGACGATTGTCAAGAGCAAGCAGCGTGCTCAACTCCGTCTTTTCTACAAG AACAAAAAGTACGCCCCGCTGGATCTGCGTCCCAAGAAGACTCGTGCCATTCGCCGTCGATTGTCACCCCAAGAC AGTGCCCGCGTTCTAGAAAAGGTCAAGAAACGCAACTCGCACTTTTGCCAACGAAAGTTTGCTATCAAGGCTGCC TAA |
Transcript | >OphauG2|7917 ATGTCGACGAGCAAAGTCAAGACCTCCCAGTTATGGGACAAGAATAAGGACGACCTATTGAAGCAACTCGTTGAG CTCAAGACGGAACTCGGCCAGCTTCGCGTCCAAAAGGTCGCGTCATCAGGCACCAAATTGAATAGAATCCATGAT TTACGAAAATCGATTGCCCGTGTCTTGACGATTGTCAAGAGCAAGCAGCGTGCTCAACTCCGTCTTTTCTACAAG AACAAAAAGTACGCCCCGCTGGATCTGCGTCCCAAGAAGACTCGTGCCATTCGCCGTCGATTGTCACCCCAAGAC AGTGCCCGCGTTCTAGAAAAGGTCAAGAAACGCAACTCGCACTTTTGCCAACGAAAGTTTGCTATCAAGGCTGCC TAA |
Gene | >OphauG2|7917 ATGGTGAGTTCCTGCAGCTTCTTGGTCAATTCTGCCTCATTGCCTCTGGTCTCGGCGAACTCTTGGCCCAGCCGC TACCTCAAGACTGCATCTATCAAGAGTCTCTGGCTCTCCCCCTATCTGCCTCTGTGTGTGTCGAGACTTCGTGCC CACAAAGAGCATCGATTTGTCTCTCGCGCCTTTTCTTTCTTGTCCCGCTGCCTCTTACCGCTCCATTCCAGAACC TCTAGGCTGACTTTACTGTTTTGTCTTCAAGTCGACGAGCAAAGTCAAGACCTCCCAGTTATGGGACAAGAATAA GGACGACCTATTGAAGCAACTCGTTGAGCTCAAGACGGAACTCGGCCAGCTTCGCGTCCAAAAGGTCGCGTCATC AGGCACCAAATTGAATAGAATGTATAACCACCTTCCGACACCCCATCTATTAGTCGCATCCCCTAGAGAGCCGTT GTTGATGAGTTTCATAATAGCCATGATTTACGAAAATCGATTGCCCGTGTCTTGACGATTGTCAAGAGCAAGCAG CGTGCTCAACTCCGTCTTTTCTACAAGAACAAAAAGTACGCCCCGCTGGATCTGCGTCCCAAGAAGACTCGTGCC ATTCGCCGTCGATTGTCACCCCAAGACAGTGCCCGCGTTCTAGAAAAGGTCAAGAAACGCAACTCGCACTTTTGC CAACGAAAGTTTGCTATCAAGGTACAACTAAACATTCTCCACAAACTTGTTAAGGTTTCTCCGACTTTTATTGCT GACCAGGATTGAAGGCTGCCTAA |