Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|7908
Gene name
LocationContig_974:3084..6174
Strand+
Gene length (bp)3090
Transcript length (bp)2547
Coding sequence length (bp)2547
Protein length (aa) 849

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 8.0E-06 55 88
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 3.9E-08 118 155
PF04082 Fungal_trans Fungal specific transcription factor domain 1.4E-07 293 461

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9HDX1|YKN4_SCHPO Uncharacterized transcriptional regulatory protein PB1A11.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB1A11.04c PE=3 SV=1 115 500 1.0E-09

GO

GO Term Description Terminal node
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0003677 DNA binding Yes
GO:0006351 transcription, DNA-templated Yes
GO:0008270 zinc ion binding Yes
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0009059 macromolecule biosynthetic process No
GO:1901576 organic substance biosynthetic process No
GO:0018130 heterocycle biosynthetic process No
GO:0009058 biosynthetic process No
GO:0008152 metabolic process No
GO:0031323 regulation of cellular metabolic process No
GO:0008150 biological_process No
GO:0080090 regulation of primary metabolic process No
GO:0060255 regulation of macromolecule metabolic process No
GO:0010468 regulation of gene expression No
GO:0009987 cellular process No
GO:0050789 regulation of biological process No
GO:0044238 primary metabolic process No
GO:1901363 heterocyclic compound binding No
GO:0046872 metal ion binding No
GO:0003676 nucleic acid binding No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0043167 ion binding No
GO:0019222 regulation of metabolic process No
GO:2001141 regulation of RNA biosynthetic process No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0050794 regulation of cellular process No
GO:0032774 RNA biosynthetic process No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0031326 regulation of cellular biosynthetic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0097659 nucleic acid-templated transcription No
GO:0006725 cellular aromatic compound metabolic process No
GO:0016070 RNA metabolic process No
GO:0051252 regulation of RNA metabolic process No
GO:0043169 cation binding No
GO:0044237 cellular metabolic process No
GO:0003700 DNA-binding transcription factor activity No
GO:0097159 organic cyclic compound binding No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0046483 heterocycle metabolic process No
GO:0003674 molecular_function No
GO:0090304 nucleic acid metabolic process No
GO:0046914 transition metal ion binding No
GO:0044249 cellular biosynthetic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0019438 aromatic compound biosynthetic process No
GO:0071704 organic substance metabolic process No
GO:0005488 binding No
GO:0006807 nitrogen compound metabolic process No
GO:0065007 biological regulation No
GO:0043170 macromolecule metabolic process No
GO:0009889 regulation of biosynthetic process No
GO:0140110 transcription regulator activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|7908
MDSLSAARDANRPPALALANANPPSKDAFVPSHSSSSASPPIKRRRAAPIMADCCRTCRLRKVKCSGNPGNGACT
NCARLELSCNFASLDDHEEATVSRTTPSHSHTEAGTLRKRAQRACSQCHAHKTKCSGDLPRCKRCEASNLPCEYT
PAKRRFTNVRFQNTSKSIEPQTSAPASVARSDGIVSPSLSSSSGAAPITITTDTSNLCAEDLMARKDLVLRHLDA
YMNNVYWLPCQGFIHPEFTYLDIQEGTLDPVHAAGICAVASSFVNPSEAGRQFGQKCSTLLELYLFQNVYTFSDN
LLILFALNITFNVVQGSFAKVWQCFGIASRLMLGLRINWHVLPRGRSFIQQESLRRIGWHFFHMDRMLAGGYEEY
ICCRAENMKIPLPCDETSYRNNHPVVAERLYDKPGKSPSTINLHAYQMRLVDLRHRIQVTTKRMCSPSTTNSQYL
DASKIMADINGLQNELTRFHSSLPSDVLLSDQSIQRYMKRPERLGYVFLHCHLAGSHIDLYRFFLPGQREKVPIE
VLRKLPREFLARSQKQAVAHSMSFGRFCDAIQHEVSQIKDTGKLELAGDYSTIQLGTSCVRVLLVAIQHRLFHDI
TEESTAPLWRLGVIDEPHLRHLIHAVQRVIEPWCAILGMAKQAYDHNKALVEEFDRTRKVADQKYSDRVFRPRPE
GDSRLPGPESLLESVAAGTMEDPRRQLTLDASSADHWLRSSQQSPGATLSYSQSPRFEVEPGTPGIPLLLAQART
GSLDPSESSAAFEAGNAMMGLADLNANLPDGHSLMAPGEMSHSHMNGSIDPAMYHQAPSGPSNGFMMGQHDMFID
GYNGHYANGHGDQNHYGQHAGYG*
Coding >OphauG2|7908
ATGGATTCGCTGTCGGCAGCCCGCGACGCCAATAGGCCGCCCGCTCTGGCTCTCGCCAATGCAAACCCCCCCTCC
AAGGATGCTTTTGTCCCTTCCCACTCATCGTCGTCTGCTTCGCCTCCTATCAAGCGCCGCCGTGCCGCTCCCATC
ATGGCTGACTGCTGCCGCACCTGTCGCCTGCGCAAGGTCAAATGCTCGGGCAATCCAGGAAATGGTGCTTGCACC
AATTGTGCCAGGCTCGAGCTATCTTGCAACTTTGCCAGCCTAGATGACCACGAAGAGGCCACAGTGTCGAGGACC
ACTCCCTCTCATAGCCACACTGAAGCGGGGACCTTGAGAAAGAGGGCTCAACGCGCCTGTAGCCAGTGCCATGCT
CACAAGACAAAGTGCTCGGGCGACTTGCCTCGATGCAAGAGATGCGAGGCCAGCAATCTGCCGTGCGAGTACACT
CCTGCCAAGCGACGCTTCACCAATGTTCGCTTCCAAAACACCTCCAAGTCGATTGAGCCGCAGACGTCTGCTCCC
GCCTCTGTTGCCAGGTCAGACGGCATTGTTAGTCCCTCTCTCAGCAGCAGTAGTGGCGCTGCTCCTATTACCATT
ACCACCGACACGTCCAATTTGTGTGCCGAAGACTTGATGGCTCGTAAAGATCTCGTCTTGCGGCACCTGGATGCA
TACATGAACAATGTTTACTGGCTGCCGTGCCAGGGCTTTATCCACCCCGAGTTCACCTATCTCGATATTCAGGAA
GGCACCTTGGATCCCGTACACGCTGCCGGTATTTGCGCCGTTGCTAGTTCCTTTGTCAACCCGAGTGAGGCGGGC
CGCCAATTTGGCCAAAAGTGCAGCACCCTGCTAGAGCTCTATCTCTTTCAAAACGTCTACACATTTTCCGATAAT
CTACTCATTCTATTTGCTCTCAACATCACCTTCAACGTTGTCCAAGGCTCGTTTGCCAAGGTGTGGCAGTGCTTT
GGTATTGCTTCCAGACTAATGCTTGGATTACGTATAAATTGGCATGTTCTCCCCCGCGGTCGCAGCTTTATTCAG
CAAGAGTCTCTTCGTCGAATAGGGTGGCATTTTTTTCACATGGATCGCATGCTTGCAGGCGGATACGAAGAATAC
ATTTGCTGCAGGGCAGAAAATATGAAGATCCCATTACCTTGCGATGAAACCTCGTATCGGAACAACCACCCTGTC
GTGGCTGAACGCCTTTACGACAAGCCCGGAAAGTCACCAAGCACAATCAATCTGCACGCCTATCAAATGCGTCTT
GTTGATCTGAGACATCGGATACAAGTTACCACCAAGCGAATGTGCTCTCCCTCCACCACCAACTCGCAGTATCTC
GATGCTTCGAAAATCATGGCCGATATAAATGGGCTACAAAACGAATTGACCCGTTTCCACTCGTCTCTTCCATCC
GATGTCTTACTGAGCGACCAGAGCATTCAGCGGTATATGAAGCGCCCAGAGCGACTCGGCTACGTCTTTCTGCAT
TGTCACCTTGCAGGAAGCCACATTGATTTGTACAGATTCTTCTTGCCCGGACAACGAGAAAAGGTGCCAATTGAG
GTCCTTCGGAAATTGCCCCGCGAATTTCTGGCAAGGTCTCAGAAGCAAGCAGTTGCTCATTCCATGTCATTTGGC
CGTTTTTGTGATGCGATACAACACGAAGTGTCCCAAATCAAGGATACTGGAAAGCTCGAACTGGCTGGCGACTAC
TCCACCATTCAGTTGGGAACGTCGTGCGTCCGAGTCTTGCTAGTTGCTATTCAACACCGTCTGTTTCACGACATC
ACGGAAGAATCTACAGCGCCACTGTGGAGACTGGGAGTTATTGATGAGCCCCATTTGCGACACCTCATTCATGCT
GTTCAGCGGGTAATTGAACCTTGGTGTGCGATTTTGGGCATGGCAAAACAAGCTTACGACCACAATAAAGCGCTG
GTGGAAGAATTCGATCGGACGAGAAAGGTTGCCGATCAAAAATATTCAGACAGGGTTTTTAGGCCAAGGCCCGAA
GGCGACAGTCGGCTGCCTGGTCCAGAGTCTTTACTTGAAAGCGTCGCAGCCGGCACCATGGAGGACCCGAGGAGG
CAACTGACACTCGATGCGTCGAGTGCCGATCACTGGCTGCGCTCATCTCAACAGTCTCCGGGAGCAACCCTTTCA
TATTCGCAATCTCCCCGTTTTGAGGTTGAGCCGGGCACCCCAGGAATTCCTCTTCTCCTGGCTCAAGCTAGGACT
GGATCCCTCGATCCATCAGAATCATCGGCCGCATTTGAGGCTGGCAACGCCATGATGGGCTTGGCCGATTTGAAT
GCCAATTTACCCGACGGCCATTCGCTTATGGCTCCCGGCGAAATGTCGCATTCGCACATGAATGGCAGCATTGAT
CCTGCCATGTATCATCAAGCGCCATCTGGGCCAAGTAATGGCTTCATGATGGGCCAGCACGACATGTTTATAGAC
GGATACAATGGGCACTATGCCAATGGACATGGCGATCAGAATCATTATGGACAGCACGCCGGCTACGGATGA
Transcript >OphauG2|7908
ATGGATTCGCTGTCGGCAGCCCGCGACGCCAATAGGCCGCCCGCTCTGGCTCTCGCCAATGCAAACCCCCCCTCC
AAGGATGCTTTTGTCCCTTCCCACTCATCGTCGTCTGCTTCGCCTCCTATCAAGCGCCGCCGTGCCGCTCCCATC
ATGGCTGACTGCTGCCGCACCTGTCGCCTGCGCAAGGTCAAATGCTCGGGCAATCCAGGAAATGGTGCTTGCACC
AATTGTGCCAGGCTCGAGCTATCTTGCAACTTTGCCAGCCTAGATGACCACGAAGAGGCCACAGTGTCGAGGACC
ACTCCCTCTCATAGCCACACTGAAGCGGGGACCTTGAGAAAGAGGGCTCAACGCGCCTGTAGCCAGTGCCATGCT
CACAAGACAAAGTGCTCGGGCGACTTGCCTCGATGCAAGAGATGCGAGGCCAGCAATCTGCCGTGCGAGTACACT
CCTGCCAAGCGACGCTTCACCAATGTTCGCTTCCAAAACACCTCCAAGTCGATTGAGCCGCAGACGTCTGCTCCC
GCCTCTGTTGCCAGGTCAGACGGCATTGTTAGTCCCTCTCTCAGCAGCAGTAGTGGCGCTGCTCCTATTACCATT
ACCACCGACACGTCCAATTTGTGTGCCGAAGACTTGATGGCTCGTAAAGATCTCGTCTTGCGGCACCTGGATGCA
TACATGAACAATGTTTACTGGCTGCCGTGCCAGGGCTTTATCCACCCCGAGTTCACCTATCTCGATATTCAGGAA
GGCACCTTGGATCCCGTACACGCTGCCGGTATTTGCGCCGTTGCTAGTTCCTTTGTCAACCCGAGTGAGGCGGGC
CGCCAATTTGGCCAAAAGTGCAGCACCCTGCTAGAGCTCTATCTCTTTCAAAACGTCTACACATTTTCCGATAAT
CTACTCATTCTATTTGCTCTCAACATCACCTTCAACGTTGTCCAAGGCTCGTTTGCCAAGGTGTGGCAGTGCTTT
GGTATTGCTTCCAGACTAATGCTTGGATTACGTATAAATTGGCATGTTCTCCCCCGCGGTCGCAGCTTTATTCAG
CAAGAGTCTCTTCGTCGAATAGGGTGGCATTTTTTTCACATGGATCGCATGCTTGCAGGCGGATACGAAGAATAC
ATTTGCTGCAGGGCAGAAAATATGAAGATCCCATTACCTTGCGATGAAACCTCGTATCGGAACAACCACCCTGTC
GTGGCTGAACGCCTTTACGACAAGCCCGGAAAGTCACCAAGCACAATCAATCTGCACGCCTATCAAATGCGTCTT
GTTGATCTGAGACATCGGATACAAGTTACCACCAAGCGAATGTGCTCTCCCTCCACCACCAACTCGCAGTATCTC
GATGCTTCGAAAATCATGGCCGATATAAATGGGCTACAAAACGAATTGACCCGTTTCCACTCGTCTCTTCCATCC
GATGTCTTACTGAGCGACCAGAGCATTCAGCGGTATATGAAGCGCCCAGAGCGACTCGGCTACGTCTTTCTGCAT
TGTCACCTTGCAGGAAGCCACATTGATTTGTACAGATTCTTCTTGCCCGGACAACGAGAAAAGGTGCCAATTGAG
GTCCTTCGGAAATTGCCCCGCGAATTTCTGGCAAGGTCTCAGAAGCAAGCAGTTGCTCATTCCATGTCATTTGGC
CGTTTTTGTGATGCGATACAACACGAAGTGTCCCAAATCAAGGATACTGGAAAGCTCGAACTGGCTGGCGACTAC
TCCACCATTCAGTTGGGAACGTCGTGCGTCCGAGTCTTGCTAGTTGCTATTCAACACCGTCTGTTTCACGACATC
ACGGAAGAATCTACAGCGCCACTGTGGAGACTGGGAGTTATTGATGAGCCCCATTTGCGACACCTCATTCATGCT
GTTCAGCGGGTAATTGAACCTTGGTGTGCGATTTTGGGCATGGCAAAACAAGCTTACGACCACAATAAAGCGCTG
GTGGAAGAATTCGATCGGACGAGAAAGGTTGCCGATCAAAAATATTCAGACAGGGTTTTTAGGCCAAGGCCCGAA
GGCGACAGTCGGCTGCCTGGTCCAGAGTCTTTACTTGAAAGCGTCGCAGCCGGCACCATGGAGGACCCGAGGAGG
CAACTGACACTCGATGCGTCGAGTGCCGATCACTGGCTGCGCTCATCTCAACAGTCTCCGGGAGCAACCCTTTCA
TATTCGCAATCTCCCCGTTTTGAGGTTGAGCCGGGCACCCCAGGAATTCCTCTTCTCCTGGCTCAAGCTAGGACT
GGATCCCTCGATCCATCAGAATCATCGGCCGCATTTGAGGCTGGCAACGCCATGATGGGCTTGGCCGATTTGAAT
GCCAATTTACCCGACGGCCATTCGCTTATGGCTCCCGGCGAAATGTCGCATTCGCACATGAATGGCAGCATTGAT
CCTGCCATGTATCATCAAGCGCCATCTGGGCCAAGTAATGGCTTCATGATGGGCCAGCACGACATGTTTATAGAC
GGATACAATGGGCACTATGCCAATGGACATGGCGATCAGAATCATTATGGACAGCACGCCGGCTACGGATGA
Gene >OphauG2|7908
ATGGATTCGCTGTCGGCAGCCCGCGACGCCAATAGGCCGCCCGCTCTGGCTCTCGCCAATGCAAACCCCCCCTCC
AAGGATGCTTTTGTCCCTTCCCACTCATCGTCGTCTGCTTCGCCTCCTATCAAGCGCCGCCGTGCCGCTCCCATC
ATGGCTGACTGCTGCCGCACCTGTCGCCTGCGCAAGGTAAGCACCAAGTACTCGCCTGTTTCAACCTAGCTCGGA
GCTGCTGCTTGTCTGCTTGTTTCTACATGACTCCAGCCCCTCGTCATCCCCCTCTGTCGTGACCCATTGCCCCCC
TTGTTGCCACCAACGCCTGCCTCACTCACTTACAAGCCTCTACAACTCTTGCCTTTTTGCTTGCCTGCTAACTTG
ATCCACCAGGTCAAATGCTCGGGCAATCCAGGAAATGGTGCTTGCACCAATTGTGCCAGGCTCGAGCTATCTTGC
AACTTTGCCAGCCTAGATGACCACGAAGAGGCCACAGGTACATATAGACAAGTCTTTGCTTCTCCAAATGCTCAG
CCCTCTAATGCACTATTTCCACTCTTCAGTGTCGAGGACCACTCCCTCTCATAGCCACACTGAAGCGGGGACCTT
GAGAAAGAGGGCTCAACGCGCCTGTAGCCAGTGCCATGCTCACAAGACAAAGTGCTCGGGCGACTTGCCTCGATG
CAAGAGATGCGAGGCCAGCAATCTGCCGTGCGAGTACACTCCTGCCAAGCGACGCTTCACCAATGTTCGCTTCCA
AAACACCTCCAAGTCGATTGAGCCGCAGACGTCTGCTCCCGCCTCTGTTGCCAGGTCAGACGGCATTGTTAGTCC
CTCTCTCAGCAGCAGTAGTGGCGCTGCTCCTATTACCATTACCACCGACACGTCCAATTTGTGTGCCGAGTATGA
CCTCCTTCAATTTTTGCTGTTTGCTGCGCCGCTCTTTGTTTGCTTACTGTTTGCTGTTGTAGAGACTTGATGGCT
CGTAAAGATCTCGTCTTGCGGCACCTGGATGCATACATGAACAATGTTTACTGGCTGCCGTGCCAGGGCTTTATC
CACCCCGAGTTCACCTATCTCGATATTCAGGTTGGCAATAAACGGCAAGCTTTTATGCTGCATTCTTGCTTGTTC
CACTGACCTTTGGGACTACAGGAAGGCACCTTGGATCCCGTACACGCTGCCGGTATTTGCGCCGTTGCTAGTTCC
TTTGTCAACCCGAGTGAGGCGGGCCGCCAATTTGGCCAAAAGTGCAGCACCCTGCTAGAGCTCTATCTCTTTCAA
AACGTCTACACATTTTCCGATAATCTACTCATTCTATTTGCTCTCAACATCACCTTCAACGTTGTCCAAGGCTCG
TTTGCCAAGGTGTGGCAGTGCTTTGGTATTGCTTCCAGACTAATGCTTGGATTACGTATAAATTGGCATGTTCTC
CCCCGCGGTCGCAGCTTTATTCAGCAAGAGTCTCTTCGTCGAATAGGGTGGCATTTTTTTCACATGGATCGCATG
CTTGCAGGCGGATACGAAGAATACATTTGCTGCAGGGCAGAAAATATGAAGATCCCATTACCTTGCGATGAAACC
TCGTATCGGAACAACCACCCTGTCGTGGCTGAACGCCTTTACGACAAGCCCGGAAAGTCACCAAGCACAATCAAT
CTGCACGCCTATCAAATGCGTCTTGTTGATCTGAGACATCGGATACAAGTGTGAGTTCTGCTGCAGCTTGTCAAG
AGAGAGGGGTGGACGAATTGTCTAGCTTACACGTGGTCGACTAGTACCACCAAGCGAATGTGCTCTCCCTCCACC
ACCAACTCGCAGTATCTCGATGCTTCGAAAATCATGGCCGATATAAATGGGCTACAAAACGAATTGACCCGTTTC
CACTCGTCTCTTCCATCCGATGTCTTACTGAGCGACCAGAGCATTCAGCGGTATATGAAGCGCCCAGAGCGACTC
GGCTACGTCTTTCTGCATTGTCACCTTGCAGGAAGCCACATTGATTTGTACAGATTCTTCTTGCCCGGACAACGA
GAAAAGGTGCCAATTGAGGTCCTTCGGAAATTGCCCCGCGAATTTCTGGCAAGGTCTCAGAAGCAAGCAGTTGCT
CATTCCATGTCATTTGGCCGTTTTTGTGATGCGATACAACACGAAGTGTCCCAAATCAAGGATACTGGAAAGCTC
GAACTGGCTGGCGACTACTCCACCATTCAGTTGGGAACGTCGTGCGTCCGAGTCTTGCTAGTTGCTATTCAACAC
CGTCTGTTTCACGACATCACGGAAGAATCTACAGCGCCACTGTGGAGACTGGGAGTTATTGATGAGCCCCATTTG
CGACACCTCATTCATGCTGTTCAGCGGGTAATTGAACCTTGGTGTGCGATTTTGGGCATGGCAAAACAAGCTGTA
TGTTACAAAGCTCTGCAAAGCTCTTCTACCCAGAAAAAGTTGTTTCCCAGTGCCTCGGCTAACATGGGCCAGTAC
GACCACAATAAAGCGCTGGTGGAAGAATTCGATCGGACGAGAAAGGTTGCCGATCAAAAATATTCAGACAGGGTT
TTTAGGCCAAGGCCCGAAGGCGACAGTCGGCTGCCTGGTCCAGAGTCTTTACTTGAAAGCGTCGCAGCCGGCACC
ATGGAGGACCCGAGGAGGCAACTGACACTCGATGCGTCGAGTGCCGATCACTGGCTGCGCTCATCTCAACAGTCT
CCGGGAGCAACCCTTTCATATTCGCAATCTCCCCGTTTTGAGGTTGAGCCGGGCACCCCAGGAATTCCTCTTCTC
CTGGCTCAAGCTAGGACTGGATCCCTCGATCCATCAGAATCATCGGCCGCATTTGAGGCTGGCAACGCCATGATG
GGCTTGGCCGATTTGAATGCCAATTTACCCGACGGCCATTCGCTTATGGCTCCCGGCGAAATGTCGCATTCGCAC
ATGAATGGCAGCATTGATCCTGCCATGTATCATCAAGCGCCATCTGGGCCAAGTAATGGCTTCATGATGGGCCAG
CACGACATGTTTATAGACGGATACAATGGGCACTATGCCAATGGACATGGCGATCAGAATCATTATGGACAGCAC
GCCGGCTACGGATGA

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