Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|7752
Gene name
Location	Contig_936:3824..4998
Strand	+
Gene length (bp)	1174
Transcript length (bp)	1032
Coding sequence length (bp)	1032
Protein length (aa)	344

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF10058	zinc_ribbon_10	Predicted integral membrane zinc-ribbon metal-binding protein	1.9E-16	235	293

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9C0E8\|LNP_HUMAN	Protein lunapark OS=Homo sapiens GN=LNP PE=1 SV=2	4	295	1.0E-15
sp\|Q5R891\|LNP_PONAB	Protein lunapark OS=Pongo abelii GN=LNP PE=2 SV=1	4	295	1.0E-15
sp\|Q7TQ95\|LNP_MOUSE	Protein lunapark OS=Mus musculus GN=Lnp PE=1 SV=1	20	330	3.0E-14
sp\|Q28HF6\|LNP_XENTR	Protein lunapark OS=Xenopus tropicalis GN=lnp PE=2 SV=1	20	331	2.0E-13
sp\|Q6DFJ8\|LNP_XENLA	Protein lunapark OS=Xenopus laevis GN=lnp PE=2 SV=1	20	295	3.0E-11

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9C0E8\|LNP_HUMAN	Protein lunapark OS=Homo sapiens GN=LNP PE=1 SV=2	4	295	1.0E-15
sp\|Q5R891\|LNP_PONAB	Protein lunapark OS=Pongo abelii GN=LNP PE=2 SV=1	4	295	1.0E-15
sp\|Q7TQ95\|LNP_MOUSE	Protein lunapark OS=Mus musculus GN=Lnp PE=1 SV=1	20	330	3.0E-14
sp\|Q28HF6\|LNP_XENTR	Protein lunapark OS=Xenopus tropicalis GN=lnp PE=2 SV=1	20	331	2.0E-13
sp\|Q6DFJ8\|LNP_XENLA	Protein lunapark OS=Xenopus laevis GN=lnp PE=2 SV=1	20	295	3.0E-11
sp\|Q6PFM4\|LNPB_DANRE	Protein lunapark-B OS=Danio rerio GN=lnpb PE=2 SV=2	7	341	1.0E-10
sp\|Q17667\|LNP1_CAEEL	Protein lunapark-1 OS=Caenorhabditis elegans GN=lnp-1 PE=2 SV=2	21	295	9.0E-10
sp\|Q1KKR9\|LNPB_TAKRU	Protein lunapark-B OS=Takifugu rubripes GN=lnpb PE=3 SV=1	85	295	3.0E-08
sp\|A8XK26\|LNP1_CAEBR	Protein lunapark-1 OS=Caenorhabditis briggsae GN=lnp-1 PE=3 SV=1	28	294	3.0E-07

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 34	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	47	69	22
2	79	101	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|7752 MVSFWPWKTDTSSTASFEKTLSVLSAKIDQVQSRLETLRFRSRRARLVTTLYLSFGYLVYAIVTILVIGRAGLGA REWTGLAAGPVVIYAVRYIVVAYYSFRTDSLSSRLKTLQQERSRTIDKLKDATRYNSTLQLLEKYGGDQDDSKAT RQPVQTASASDAASNKAPGPAPTEKTPPPTRVLLPPPPTANIQVQPRQNPPPRQNPSPHPVAEVLPGAEFAPNAF SSWAPQQRNWYDRIFDVLLGEDADPADPRNRLALICRSCRRVNGLAPPGSRSLAQVGLWRCMHCDASNEADAEPD EGKRIVKEILEEQRAASPSAEEASAVPSTEQDGVRRRPSKDEI*
Coding	>OphauG2\|7752 ATGGTGTCCTTTTGGCCATGGAAGACCGACACCTCGTCTACGGCTTCGTTTGAAAAGACCTTGTCGGTGCTCTCG GCCAAGATTGACCAGGTGCAGTCGCGGCTAGAAACCCTGCGCTTTCGCTCCCGACGCGCTCGCCTCGTGACGACG CTCTACCTGTCGTTTGGCTACCTCGTCTACGCCATTGTCACCATTCTCGTTATTGGCCGCGCTGGCCTCGGCGCC CGGGAATGGACTGGCTTGGCTGCTGGACCTGTTGTCATCTACGCTGTGCGATACATCGTCGTCGCGTACTATAGC TTTCGCACCGATAGCCTCTCGTCTCGCCTCAAGACACTTCAGCAGGAACGCTCTCGAACCATTGACAAGCTTAAA GACGCCACGCGCTACAACTCTACCCTCCAGCTTCTGGAAAAGTACGGCGGAGACCAAGACGACTCCAAAGCAACA CGCCAGCCAGTCCAAACAGCTTCGGCCTCGGACGCGGCTTCCAACAAAGCGCCTGGCCCTGCCCCGACGGAAAAG ACTCCTCCCCCGACCCGAGTCTTGCTTCCTCCTCCTCCCACAGCAAATATCCAAGTGCAGCCTCGTCAGAACCCA CCGCCTCGTCAAAACCCGTCGCCGCATCCCGTTGCCGAGGTCCTTCCCGGCGCAGAGTTCGCCCCCAACGCCTTC TCGTCTTGGGCGCCCCAACAGAGGAACTGGTACGACCGCATCTTTGACGTGCTTCTCGGCGAAGATGCAGACCCC GCCGACCCCCGCAACCGCCTGGCCCTCATCTGCCGCTCGTGCCGCCGCGTCAACGGCCTGGCTCCCCCGGGCTCA CGCTCCCTCGCCCAGGTTGGCCTCTGGCGCTGCATGCACTGCGATGCCTCCAACGAGGCCGACGCTGAGCCGGAC GAAGGGAAGCGCATCGTCAAGGAGATTCTTGAAGAGCAGCGTGCCGCCTCTCCATCTGCTGAAGAAGCCTCGGCG GTGCCATCAACCGAGCAAGACGGCGTGCGCCGACGGCCCTCCAAGGATGAAATCTAG
Transcript	>OphauG2\|7752 ATGGTGTCCTTTTGGCCATGGAAGACCGACACCTCGTCTACGGCTTCGTTTGAAAAGACCTTGTCGGTGCTCTCG GCCAAGATTGACCAGGTGCAGTCGCGGCTAGAAACCCTGCGCTTTCGCTCCCGACGCGCTCGCCTCGTGACGACG CTCTACCTGTCGTTTGGCTACCTCGTCTACGCCATTGTCACCATTCTCGTTATTGGCCGCGCTGGCCTCGGCGCC CGGGAATGGACTGGCTTGGCTGCTGGACCTGTTGTCATCTACGCTGTGCGATACATCGTCGTCGCGTACTATAGC TTTCGCACCGATAGCCTCTCGTCTCGCCTCAAGACACTTCAGCAGGAACGCTCTCGAACCATTGACAAGCTTAAA GACGCCACGCGCTACAACTCTACCCTCCAGCTTCTGGAAAAGTACGGCGGAGACCAAGACGACTCCAAAGCAACA CGCCAGCCAGTCCAAACAGCTTCGGCCTCGGACGCGGCTTCCAACAAAGCGCCTGGCCCTGCCCCGACGGAAAAG ACTCCTCCCCCGACCCGAGTCTTGCTTCCTCCTCCTCCCACAGCAAATATCCAAGTGCAGCCTCGTCAGAACCCA CCGCCTCGTCAAAACCCGTCGCCGCATCCCGTTGCCGAGGTCCTTCCCGGCGCAGAGTTCGCCCCCAACGCCTTC TCGTCTTGGGCGCCCCAACAGAGGAACTGGTACGACCGCATCTTTGACGTGCTTCTCGGCGAAGATGCAGACCCC GCCGACCCCCGCAACCGCCTGGCCCTCATCTGCCGCTCGTGCCGCCGCGTCAACGGCCTGGCTCCCCCGGGCTCA CGCTCCCTCGCCCAGGTTGGCCTCTGGCGCTGCATGCACTGCGATGCCTCCAACGAGGCCGACGCTGAGCCGGAC GAAGGGAAGCGCATCGTCAAGGAGATTCTTGAAGAGCAGCGTGCCGCCTCTCCATCTGCTGAAGAAGCCTCGGCG GTGCCATCAACCGAGCAAGACGGCGTGCGCCGACGGCCCTCCAAGGATGAAATCTAG
Gene	>OphauG2\|7752 ATGGTGTCCTTTTGGCCATGGAAGGTCAGCTCACCCACCACCAGCCCCAGCTACTACACCAGCTAAACCTGGCTC CAGACCGACACCTCGTCTACGGCTTCGTTTGAAAAGACCTTGTCGGTGCTCTCGGCCAAGATTGACCAGGTGCAG TCGCGGCTAGAAACCCTGCGCTTTCGCTCCCGACGCGCTCGCCTCGTGACGACGCTCTACCTGTCGTTTGGCTAC CTCGTCTACGCCATTGTCACCATTCTCGTTATTGGCCGCGCTGGCCTCGGCGCCCGGGAATGGACTGGCTTGGCT GCTGGACCTGTTGTGTGCGCATTTTTCCTCCTTTTTTTCTTTGGCCTGAAACCGCTCTAGGACCAGAGCTCTTGA ACTGATGACCACGCGTGGGCAATGTAGCATCTACGCTGTGCGATACATCGTCGTCGCGTACTATAGCTTTCGCAC CGATAGCCTCTCGTCTCGCCTCAAGACACTTCAGCAGGAACGCTCTCGAACCATTGACAAGCTTAAAGACGCCAC GCGCTACAACTCTACCCTCCAGCTTCTGGAAAAGTACGGCGGAGACCAAGACGACTCCAAAGCAACACGCCAGCC AGTCCAAACAGCTTCGGCCTCGGACGCGGCTTCCAACAAAGCGCCTGGCCCTGCCCCGACGGAAAAGACTCCTCC CCCGACCCGAGTCTTGCTTCCTCCTCCTCCCACAGCAAATATCCAAGTGCAGCCTCGTCAGAACCCACCGCCTCG TCAAAACCCGTCGCCGCATCCCGTTGCCGAGGTCCTTCCCGGCGCAGAGTTCGCCCCCAACGCCTTCTCGTCTTG GGCGCCCCAACAGAGGAACTGGTACGACCGCATCTTTGACGTGCTTCTCGGCGAAGATGCAGACCCCGCCGACCC CCGCAACCGCCTGGCCCTCATCTGCCGCTCGTGCCGCCGCGTCAACGGCCTGGCTCCCCCGGGCTCACGCTCCCT CGCCCAGGTTGGCCTCTGGCGCTGCATGCACTGCGATGCCTCCAACGAGGCCGACGCTGAGCCGGACGAAGGGAA GCGCATCGTCAAGGAGATTCTTGAAGAGCAGCGTGCCGCCTCTCCATCTGCTGAAGAAGCCTCGGCGGTGCCATC AACCGAGCAAGACGGCGTGCGCCGACGGCCCTCCAAGGATGAAATCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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