Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|7742
Gene name
LocationContig_933:355..1997
Strand-
Gene length (bp)1642
Transcript length (bp)1581
Coding sequence length (bp)1581
Protein length (aa) 527

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05653 Mg_trans_NIPA Magnesium transporter NIPA 3.4E-16 15 308

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q8RWF4|NIPA8_ARATH Probable magnesium transporter NIPA8 OS=Arabidopsis thaliana GN=At3g26670 PE=2 SV=1 11 305 2.0E-12
sp|B3LFA3|NIPA2_ARATH Probable magnesium transporter NIPA2 OS=Arabidopsis thaliana GN=At4g13800 PE=2 SV=1 59 308 9.0E-09
sp|Q9LIR9|NIPA1_ARATH Probable magnesium transporter NIPA1 OS=Arabidopsis thaliana GN=At3g23870 PE=2 SV=1 44 308 1.0E-08
sp|Q8GWX2|NIPA6_ARATH Probable magnesium transporter NIPA6 OS=Arabidopsis thaliana GN=At2g21120 PE=2 SV=1 55 284 6.0E-06

GO

GO Term Description Terminal node
GO:0015693 magnesium ion transport Yes
GO:0016021 integral component of membrane Yes
GO:0015095 magnesium ion transmembrane transporter activity Yes
GO:0015075 ion transmembrane transporter activity No
GO:0051179 localization No
GO:0030001 metal ion transport No
GO:0051234 establishment of localization No
GO:0046873 metal ion transmembrane transporter activity No
GO:0006811 ion transport No
GO:0008150 biological_process No
GO:0031224 intrinsic component of membrane No
GO:0005575 cellular_component No
GO:0008324 cation transmembrane transporter activity No
GO:0005215 transporter activity No
GO:0015318 inorganic molecular entity transmembrane transporter activity No
GO:0022857 transmembrane transporter activity No
GO:0022890 inorganic cation transmembrane transporter activity No
GO:0003674 molecular_function No
GO:0110165 cellular anatomical entity No
GO:0006810 transport No
GO:0006812 cation transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.5

Transmembrane Domains

Domain # Start End Length
1 10 32 22
2 59 81 22
3 86 105 19
4 112 134 22
5 152 174 22
6 231 248 17
7 258 280 22
8 285 307 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|7742
MSSLGGLSPGGSIALGIVVGLMSTSVQSLGLTLQRKSHMLEDEKGPHDVRRPPYLRRRWQLGMAMFIVANLLGST
VQISTLPLPVLSTLQAAGLVFNSICATLILSEPFTRWSLCGTVLVTTGAVLIGIFGAIPSPAHNLDQLLHLMARK
PFIVWMILQAIFVIATAVVTDLVNKMSSISHNSRFRLVRGILYGVISGDLSAHALLFAKSAVELIIKTIGGNNQF
SRWQSWVIVLGLVSLALSQLYYLHRGLKLVSTSVLYPLVFCVYNIIAILDGLIYFDQTSLISVLQACLIALGTAI
LLSGVLALSWRLSAEQHSPGVGQSTLAPGLGLVEDTEGEEESLVGSESAVEDEDAPAYQTFLPANAETTPLTSNR
KKGFRWAERAEIWGELEDEDEDDVPASRRRSSTVPSRSETTALLPPAPRRADDSDPSVTDSTLRKPSRRRRRSTG
FPGLVARRGRRRDSAASGTFRNLLSLSWLVGRPSRTSLGGASSTDFTDASSRSYLRHDHENDYSIDNRQGANHSA
V*
Coding >OphauG2|7742
ATGTCTTCCTTGGGCGGCCTGTCTCCTGGCGGCAGCATAGCTCTCGGCATTGTTGTGGGATTGATGTCAACCAGT
GTCCAGAGCCTGGGCCTCACGCTGCAACGCAAGTCGCACATGCTCGAAGACGAAAAGGGCCCTCACGATGTGCGC
CGCCCGCCGTATCTGCGACGAAGATGGCAGCTCGGAATGGCCATGTTCATAGTGGCAAACCTGCTGGGAAGCACC
GTTCAGATCTCTACCCTGCCGCTCCCCGTTCTCTCCACTCTCCAAGCTGCCGGTCTAGTCTTCAACTCCATTTGT
GCCACCCTGATTCTCAGCGAGCCCTTTACGCGATGGTCTCTGTGCGGCACTGTGCTCGTCACGACTGGTGCAGTC
CTTATTGGCATCTTTGGCGCTATCCCCTCTCCGGCGCACAACTTGGACCAACTTCTACACCTCATGGCGCGCAAA
CCCTTCATCGTTTGGATGATTCTACAGGCCATCTTTGTCATTGCCACCGCCGTCGTTACCGATCTTGTCAACAAA
ATGTCGAGCATCTCGCATAATTCGCGCTTTCGACTGGTGCGGGGCATCCTCTATGGTGTCATCAGTGGAGATCTC
TCTGCTCATGCCTTGCTGTTTGCCAAATCAGCTGTTGAGCTCATTATCAAGACAATTGGCGGCAACAATCAGTTT
TCTCGATGGCAGTCTTGGGTCATTGTACTAGGCCTTGTGTCCCTAGCACTCAGTCAGCTCTACTACCTGCACCGA
GGTCTGAAATTGGTCTCGACATCGGTTCTTTATCCCCTTGTGTTTTGTGTCTACAATATCATTGCCATCCTCGAC
GGACTGATATACTTTGATCAGACGAGCCTCATTTCGGTTTTACAGGCTTGCCTCATCGCCCTAGGAACGGCCATT
CTCTTATCAGGTGTCTTGGCTCTCTCGTGGAGGCTGAGCGCTGAGCAGCATAGTCCAGGAGTCGGCCAGTCCACT
CTTGCCCCGGGCCTGGGCCTCGTTGAGGACACCGAGGGCGAGGAAGAATCCCTTGTAGGGTCCGAGTCTGCAGTC
GAGGACGAAGATGCACCCGCCTACCAGACCTTTCTTCCGGCAAATGCCGAAACGACACCGTTGACGTCGAATCGT
AAAAAAGGCTTCCGTTGGGCCGAGCGTGCCGAAATATGGGGCGAGTTGGAGGACGAGGACGAAGATGATGTTCCT
GCTTCACGGCGCCGGTCTAGCACCGTGCCTAGTCGTTCAGAGACGACTGCTTTGCTGCCGCCAGCACCACGCCGG
GCAGACGACTCTGATCCTAGTGTAACCGATTCGACACTGCGCAAGCCTTCCCGCCGGCGGAGAAGGAGCACCGGA
TTTCCGGGTCTAGTCGCACGCCGAGGCCGGAGGCGAGATTCGGCGGCGTCGGGCACTTTTCGCAATCTGCTGTCC
CTTAGTTGGCTTGTCGGCCGACCCAGCCGCACCTCGCTGGGTGGCGCGTCGTCGACTGATTTTACAGATGCTTCT
TCTAGGTCATATTTACGACATGACCATGAGAACGATTATTCTATAGACAACCGCCAAGGAGCAAATCACTCGGCT
GTATGA
Transcript >OphauG2|7742
ATGTCTTCCTTGGGCGGCCTGTCTCCTGGCGGCAGCATAGCTCTCGGCATTGTTGTGGGATTGATGTCAACCAGT
GTCCAGAGCCTGGGCCTCACGCTGCAACGCAAGTCGCACATGCTCGAAGACGAAAAGGGCCCTCACGATGTGCGC
CGCCCGCCGTATCTGCGACGAAGATGGCAGCTCGGAATGGCCATGTTCATAGTGGCAAACCTGCTGGGAAGCACC
GTTCAGATCTCTACCCTGCCGCTCCCCGTTCTCTCCACTCTCCAAGCTGCCGGTCTAGTCTTCAACTCCATTTGT
GCCACCCTGATTCTCAGCGAGCCCTTTACGCGATGGTCTCTGTGCGGCACTGTGCTCGTCACGACTGGTGCAGTC
CTTATTGGCATCTTTGGCGCTATCCCCTCTCCGGCGCACAACTTGGACCAACTTCTACACCTCATGGCGCGCAAA
CCCTTCATCGTTTGGATGATTCTACAGGCCATCTTTGTCATTGCCACCGCCGTCGTTACCGATCTTGTCAACAAA
ATGTCGAGCATCTCGCATAATTCGCGCTTTCGACTGGTGCGGGGCATCCTCTATGGTGTCATCAGTGGAGATCTC
TCTGCTCATGCCTTGCTGTTTGCCAAATCAGCTGTTGAGCTCATTATCAAGACAATTGGCGGCAACAATCAGTTT
TCTCGATGGCAGTCTTGGGTCATTGTACTAGGCCTTGTGTCCCTAGCACTCAGTCAGCTCTACTACCTGCACCGA
GGTCTGAAATTGGTCTCGACATCGGTTCTTTATCCCCTTGTGTTTTGTGTCTACAATATCATTGCCATCCTCGAC
GGACTGATATACTTTGATCAGACGAGCCTCATTTCGGTTTTACAGGCTTGCCTCATCGCCCTAGGAACGGCCATT
CTCTTATCAGGTGTCTTGGCTCTCTCGTGGAGGCTGAGCGCTGAGCAGCATAGTCCAGGAGTCGGCCAGTCCACT
CTTGCCCCGGGCCTGGGCCTCGTTGAGGACACCGAGGGCGAGGAAGAATCCCTTGTAGGGTCCGAGTCTGCAGTC
GAGGACGAAGATGCACCCGCCTACCAGACCTTTCTTCCGGCAAATGCCGAAACGACACCGTTGACGTCGAATCGT
AAAAAAGGCTTCCGTTGGGCCGAGCGTGCCGAAATATGGGGCGAGTTGGAGGACGAGGACGAAGATGATGTTCCT
GCTTCACGGCGCCGGTCTAGCACCGTGCCTAGTCGTTCAGAGACGACTGCTTTGCTGCCGCCAGCACCACGCCGG
GCAGACGACTCTGATCCTAGTGTAACCGATTCGACACTGCGCAAGCCTTCCCGCCGGCGGAGAAGGAGCACCGGA
TTTCCGGGTCTAGTCGCACGCCGAGGCCGGAGGCGAGATTCGGCGGCGTCGGGCACTTTTCGCAATCTGCTGTCC
CTTAGTTGGCTTGTCGGCCGACCCAGCCGCACCTCGCTGGGTGGCGCGTCGTCGACTGATTTTACAGATGCTTCT
TCTAGGTCATATTTACGACATGACCATGAGAACGATTATTCTATAGACAACCGCCAAGGAGCAAATCACTCGGCT
GTATGA
Gene >OphauG2|7742
ATGTCTTCCTTGGGCGGCCTGTCTCCTGGCGGCAGCATAGCTGTGCGAATGCCCTTTATTCTTTATACCGCCCGT
CGCTCCTTGCTGACACGCCGTGCTGCAGCTCGGCATTGTTGTGGGATTGATGTCAACCAGTGTCCAGAGCCTGGG
CCTCACGCTGCAACGCAAGTCGCACATGCTCGAAGACGAAAAGGGCCCTCACGATGTGCGCCGCCCGCCGTATCT
GCGACGAAGATGGCAGCTCGGAATGGCCATGTTCATAGTGGCAAACCTGCTGGGAAGCACCGTTCAGATCTCTAC
CCTGCCGCTCCCCGTTCTCTCCACTCTCCAAGCTGCCGGTCTAGTCTTCAACTCCATTTGTGCCACCCTGATTCT
CAGCGAGCCCTTTACGCGATGGTCTCTGTGCGGCACTGTGCTCGTCACGACTGGTGCAGTCCTTATTGGCATCTT
TGGCGCTATCCCCTCTCCGGCGCACAACTTGGACCAACTTCTACACCTCATGGCGCGCAAACCCTTCATCGTTTG
GATGATTCTACAGGCCATCTTTGTCATTGCCACCGCCGTCGTTACCGATCTTGTCAACAAAATGTCGAGCATCTC
GCATAATTCGCGCTTTCGACTGGTGCGGGGCATCCTCTATGGTGTCATCAGTGGAGATCTCTCTGCTCATGCCTT
GCTGTTTGCCAAATCAGCTGTTGAGCTCATTATCAAGACAATTGGCGGCAACAATCAGTTTTCTCGATGGCAGTC
TTGGGTCATTGTACTAGGCCTTGTGTCCCTAGCACTCAGTCAGCTCTACTACCTGCACCGAGGTCTGAAATTGGT
CTCGACATCGGTTCTTTATCCCCTTGTGTTTTGTGTCTACAATATCATTGCCATCCTCGACGGACTGATATACTT
TGATCAGACGAGCCTCATTTCGGTTTTACAGGCTTGCCTCATCGCCCTAGGAACGGCCATTCTCTTATCAGGTGT
CTTGGCTCTCTCGTGGAGGCTGAGCGCTGAGCAGCATAGTCCAGGAGTCGGCCAGTCCACTCTTGCCCCGGGCCT
GGGCCTCGTTGAGGACACCGAGGGCGAGGAAGAATCCCTTGTAGGGTCCGAGTCTGCAGTCGAGGACGAAGATGC
ACCCGCCTACCAGACCTTTCTTCCGGCAAATGCCGAAACGACACCGTTGACGTCGAATCGTAAAAAAGGCTTCCG
TTGGGCCGAGCGTGCCGAAATATGGGGCGAGTTGGAGGACGAGGACGAAGATGATGTTCCTGCTTCACGGCGCCG
GTCTAGCACCGTGCCTAGTCGTTCAGAGACGACTGCTTTGCTGCCGCCAGCACCACGCCGGGCAGACGACTCTGA
TCCTAGTGTAACCGATTCGACACTGCGCAAGCCTTCCCGCCGGCGGAGAAGGAGCACCGGATTTCCGGGTCTAGT
CGCACGCCGAGGCCGGAGGCGAGATTCGGCGGCGTCGGGCACTTTTCGCAATCTGCTGTCCCTTAGTTGGCTTGT
CGGCCGACCCAGCCGCACCTCGCTGGGTGGCGCGTCGTCGACTGATTTTACAGATGCTTCTTCTAGGTCATATTT
ACGACATGACCATGAGAACGATTATTCTATAGACAACCGCCAAGGAGCAAATCACTCGGCTGTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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