© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|766 |
| Gene name | |
| Location | Contig_12:27806..28425 |
| Strand | - |
| Gene length (bp) | 619 |
| Transcript length (bp) | 495 |
| Coding sequence length (bp) | 495 |
| Protein length (aa) | 165 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04749 | PLAC8 | PLAC8 family | 5.8E-22 | 15 | 116 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9LQU4|PCR2_ARATH | Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis thaliana GN=PCR2 PE=1 SV=1 | 1 | 120 | 6.0E-12 |
| sp|P0CW97|PCR3_ARATH | Protein PLANT CADMIUM RESISTANCE 3 OS=Arabidopsis thaliana GN=PCR3 PE=3 SV=1 | 12 | 120 | 7.0E-12 |
| sp|Q9LQU2|PCR1_ARATH | Protein PLANT CADMIUM RESISTANCE 1 OS=Arabidopsis thaliana GN=PCR1 PE=1 SV=1 | 1 | 120 | 9.0E-12 |
| sp|D9HP26|CNR10_MAIZE | Cell number regulator 10 OS=Zea mays GN=CNR10 PE=2 SV=1 | 12 | 120 | 5.0E-10 |
| sp|Q9LS43|PCR7_ARATH | Protein PLANT CADMIUM RESISTANCE 7 OS=Arabidopsis thaliana GN=PCR7 PE=2 SV=1 | 12 | 120 | 6.0E-10 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9LQU4|PCR2_ARATH | Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis thaliana GN=PCR2 PE=1 SV=1 | 1 | 120 | 6.0E-12 |
| sp|P0CW97|PCR3_ARATH | Protein PLANT CADMIUM RESISTANCE 3 OS=Arabidopsis thaliana GN=PCR3 PE=3 SV=1 | 12 | 120 | 7.0E-12 |
| sp|Q9LQU2|PCR1_ARATH | Protein PLANT CADMIUM RESISTANCE 1 OS=Arabidopsis thaliana GN=PCR1 PE=1 SV=1 | 1 | 120 | 9.0E-12 |
| sp|D9HP26|CNR10_MAIZE | Cell number regulator 10 OS=Zea mays GN=CNR10 PE=2 SV=1 | 12 | 120 | 5.0E-10 |
| sp|Q9LS43|PCR7_ARATH | Protein PLANT CADMIUM RESISTANCE 7 OS=Arabidopsis thaliana GN=PCR7 PE=2 SV=1 | 12 | 120 | 6.0E-10 |
| sp|D9HP27|CNR11_MAIZE | Cell number regulator 11 OS=Zea mays GN=CNR11 PE=2 SV=1 | 14 | 132 | 2.0E-08 |
| sp|Q6MW50|YB290_NEUCR | Uncharacterized protein NCU10291 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=B4B2.090 PE=4 SV=1 | 14 | 154 | 4.0E-08 |
| sp|D9HP19|CNR3_MAIZE | Cell number regulator 3 OS=Zea mays GN=CNR3 PE=2 SV=1 | 11 | 120 | 4.0E-07 |
| sp|B6SJQ0|CNR13_MAIZE | Cell number regulator 13 OS=Zea mays GN=CNR13 PE=2 SV=1 | 14 | 132 | 2.0E-06 |
| sp|Q9M815|PCR8_ARATH | Protein PLANT CADMIUM RESISTANCE 8 OS=Arabidopsis thaliana GN=PCR8 PE=1 SV=2 | 15 | 120 | 2.0E-06 |
| sp|D9HP25|CNR9_MAIZE | Cell number regulator 9 OS=Zea mays GN=CNR9 PE=2 SV=1 | 14 | 120 | 3.0E-06 |
| sp|Q9LS44|PCR4_ARATH | Protein PLANT CADMIUM RESISTANCE 4 OS=Arabidopsis thaliana GN=PCR4 PE=3 SV=1 | 7 | 120 | 5.0E-06 |
| sp|B4FF80|CNR5_MAIZE | Cell number regulator 5 OS=Zea mays GN=CNR5 PE=2 SV=1 | 2 | 130 | 9.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 45 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|766 MENQNTVARDDQQEWQASLFDCSPCSSCMLATCLPCMLYGRTASRKRDPTLQSEDMCNTDCALFTAVQCFTGCGW LFSFFKRTEIRQQYGIKGSAWGDCCATYWCHCCSLIQQDNEVRLRQAAAAANAADGPITKAYESQQQGMYMPPSL PVNEAPEKQNPTVL* |
| Coding | >OphauG2|766 ATGGAAAACCAAAACACCGTCGCCCGCGACGACCAGCAAGAATGGCAGGCCAGTCTCTTTGACTGCTCGCCATGC AGCTCGTGCATGCTCGCCACCTGTCTCCCATGCATGCTCTATGGCCGTACTGCGAGTCGCAAGCGTGATCCAACG CTTCAGTCTGAAGACATGTGCAACACAGACTGCGCCTTGTTTACTGCCGTGCAATGCTTCACCGGCTGTGGCTGG CTCTTCTCCTTTTTCAAACGTACCGAGATTCGCCAGCAGTATGGCATCAAGGGCAGCGCATGGGGCGACTGCTGT GCCACGTACTGGTGCCACTGCTGCTCTCTCATCCAGCAAGACAATGAAGTCAGGCTCAGACAGGCCGCCGCCGCC GCCAATGCTGCAGATGGCCCCATCACAAAGGCCTACGAGAGCCAGCAGCAGGGCATGTACATGCCTCCGTCTTTG CCCGTCAACGAGGCCCCCGAGAAACAGAATCCAACGGTTCTGTGA |
| Transcript | >OphauG2|766 ATGGAAAACCAAAACACCGTCGCCCGCGACGACCAGCAAGAATGGCAGGCCAGTCTCTTTGACTGCTCGCCATGC AGCTCGTGCATGCTCGCCACCTGTCTCCCATGCATGCTCTATGGCCGTACTGCGAGTCGCAAGCGTGATCCAACG CTTCAGTCTGAAGACATGTGCAACACAGACTGCGCCTTGTTTACTGCCGTGCAATGCTTCACCGGCTGTGGCTGG CTCTTCTCCTTTTTCAAACGTACCGAGATTCGCCAGCAGTATGGCATCAAGGGCAGCGCATGGGGCGACTGCTGT GCCACGTACTGGTGCCACTGCTGCTCTCTCATCCAGCAAGACAATGAAGTCAGGCTCAGACAGGCCGCCGCCGCC GCCAATGCTGCAGATGGCCCCATCACAAAGGCCTACGAGAGCCAGCAGCAGGGCATGTACATGCCTCCGTCTTTG CCCGTCAACGAGGCCCCCGAGAAACAGAATCCAACGGTTCTGTGA |
| Gene | >OphauG2|766 ATGGAAAACCAAAACACCGTCGCCCGCGACGACCAGCAAGAATGGCAGGCCAGTCTCTTTGACTGCTCGCCATGC AGCTCGTGCATGCTCGCCACCTGTCTCCCATGCATGCGTACGTCTTTTTTTTTTCTCCCTTCAAGGAAAAAACTG ACATTGCCTGATACGTTATAGTCTATGGCCGTACTGCGAGTCGCAAGCGTGATCCAACGCTTCAGTCTGAAGACA TGTGCAACACAGACTGCGCCTTGTTTACTGCCGTGCAATGCTTCACCGGCTGTGGCTGGCTGTACGTCCTTGTCT CTTTGTATCATCATCGCCATCCTAGCTGCGTCCTGACACGACCCCATCCAGCTTCTCCTTTTTCAAACGTACCGA GATTCGCCAGCAGTATGGCATCAAGGGCAGCGCATGGGGCGACTGCTGTGCCACGTACTGGTGCCACTGCTGCTC TCTCATCCAGCAAGACAATGAAGTCAGGCTCAGACAGGCCGCCGCCGCCGCCAATGCTGCAGATGGCCCCATCAC AAAGGCCTACGAGAGCCAGCAGCAGGGCATGTACATGCCTCCGTCTTTGCCCGTCAACGAGGCCCCCGAGAAACA GAATCCAACGGTTCTGTGA |