Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauG2|7627
Gene name
LocationContig_906:454..1348
Strand-
Gene length (bp)894
Transcript length (bp)762
Coding sequence length (bp)762
Protein length (aa) 254

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 4.0E-07 15 47

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P50104|STB4_YEAST Probable transcriptional regulatory protein STB4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=STB4 PE=1 SV=1 2 96 4.0E-10
sp|Q59NX5|FGR27_CANAL Filamentous growth regulator 27 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=FGR27 PE=2 SV=1 6 92 1.0E-09
sp|P33200|PDR3_YEAST Transcription factor PDR3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PDR3 PE=1 SV=2 6 123 4.0E-07
sp|Q59LV8|ASG1_CANAL Activator of stress genes protein 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ASG1 PE=3 SV=1 6 64 1.0E-06
sp|P12383|PDR1_YEAST Transcription factor PDR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PDR1 PE=1 SV=2 9 107 3.0E-06
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P50104|STB4_YEAST Probable transcriptional regulatory protein STB4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=STB4 PE=1 SV=1 2 96 4.0E-10
sp|Q59NX5|FGR27_CANAL Filamentous growth regulator 27 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=FGR27 PE=2 SV=1 6 92 1.0E-09
sp|P33200|PDR3_YEAST Transcription factor PDR3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PDR3 PE=1 SV=2 6 123 4.0E-07
sp|Q59LV8|ASG1_CANAL Activator of stress genes protein 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ASG1 PE=3 SV=1 6 64 1.0E-06
sp|P12383|PDR1_YEAST Transcription factor PDR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PDR1 PE=1 SV=2 9 107 3.0E-06
sp|O59741|YN25_SCHPO Uncharacterized transcriptional regulatory protein C530.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC530.05 PE=3 SV=2 15 106 3.0E-06
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GO

GO Term Description Terminal node
GO:0008270 zinc ion binding Yes
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0031323 regulation of cellular metabolic process No
GO:0050794 regulation of cellular process No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:2001141 regulation of RNA biosynthetic process No
GO:0019222 regulation of metabolic process No
GO:0043167 ion binding No
GO:0046872 metal ion binding No
GO:0050789 regulation of biological process No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0010468 regulation of gene expression No
GO:0060255 regulation of macromolecule metabolic process No
GO:0080090 regulation of primary metabolic process No
GO:0008150 biological_process No
GO:0140110 transcription regulator activity No
GO:0009889 regulation of biosynthetic process No
GO:0065007 biological regulation No
GO:0005488 binding No
GO:0046914 transition metal ion binding No
GO:0003674 molecular_function No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0003700 DNA-binding transcription factor activity No
GO:0043169 cation binding No
GO:0051252 regulation of RNA metabolic process No
GO:0031326 regulation of cellular biosynthetic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauG2|7627
MTPRNESHRTKVTLACESCRKRRIKCTGTQPCKNCADSGRQCAFDGKNRSRRGPRPRKISSQAARQTAARQTMAA
QTMAPKTMAPKTAVVVPADSDDSDDDDESDDDFIAQTVQWQPMLKELFFSQGHPADTTLVESDLDLVCHLIELFY
TRASMQLRALLTPAQLHEQLVQRRLSQCLVLAMCCCSLRFSVHAAVRGQRGRTVAQTLAQEARSRIGASSCPWQQ
IDSIRTLCILADYEAGCRRGRRAWMDIG*
Coding >OphauG2|7627
ATGACACCAAGAAACGAGTCACATCGGACAAAGGTGACGCTGGCGTGCGAGAGCTGTCGCAAGCGAAGAATCAAG
TGCACCGGGACCCAGCCCTGCAAAAACTGCGCCGACAGCGGACGGCAATGCGCCTTTGATGGCAAGAATCGCAGC
CGACGCGGCCCTCGGCCTCGCAAGATTAGCAGCCAGGCGGCTCGCCAGACGGCCGCTCGCCAGACCATGGCGGCC
CAGACCATGGCTCCCAAGACCATGGCCCCCAAGACGGCTGTGGTGGTCCCGGCCGACAGCGACGACAGCGACGAC
GACGACGAGTCGGACGACGACTTCATCGCGCAGACGGTGCAGTGGCAGCCCATGCTCAAGGAGCTCTTCTTCTCC
CAAGGCCACCCTGCCGACACAACGCTTGTTGAGAGCGACCTGGATCTCGTCTGCCACTTGATTGAGCTCTTCTAC
ACCCGGGCCAGCATGCAGCTGAGGGCCCTGCTGACGCCTGCCCAGCTCCACGAGCAGCTGGTCCAGCGCCGACTG
TCGCAATGCCTCGTGCTGGCCATGTGTTGCTGTAGCCTGCGCTTCTCCGTCCACGCCGCAGTGCGCGGCCAGCGA
GGCCGGACCGTTGCCCAGACGCTTGCCCAAGAGGCGCGCTCGCGCATCGGCGCTTCGAGTTGCCCCTGGCAGCAG
ATTGACAGCATTCGCACCTTGTGCATTCTTGCCGACTATGAGGCCGGCTGCCGGAGGGGGCGACGGGCGTGGATG
GATATTGGTTAG
Transcript >OphauG2|7627
ATGACACCAAGAAACGAGTCACATCGGACAAAGGTGACGCTGGCGTGCGAGAGCTGTCGCAAGCGAAGAATCAAG
TGCACCGGGACCCAGCCCTGCAAAAACTGCGCCGACAGCGGACGGCAATGCGCCTTTGATGGCAAGAATCGCAGC
CGACGCGGCCCTCGGCCTCGCAAGATTAGCAGCCAGGCGGCTCGCCAGACGGCCGCTCGCCAGACCATGGCGGCC
CAGACCATGGCTCCCAAGACCATGGCCCCCAAGACGGCTGTGGTGGTCCCGGCCGACAGCGACGACAGCGACGAC
GACGACGAGTCGGACGACGACTTCATCGCGCAGACGGTGCAGTGGCAGCCCATGCTCAAGGAGCTCTTCTTCTCC
CAAGGCCACCCTGCCGACACAACGCTTGTTGAGAGCGACCTGGATCTCGTCTGCCACTTGATTGAGCTCTTCTAC
ACCCGGGCCAGCATGCAGCTGAGGGCCCTGCTGACGCCTGCCCAGCTCCACGAGCAGCTGGTCCAGCGCCGACTG
TCGCAATGCCTCGTGCTGGCCATGTGTTGCTGTAGCCTGCGCTTCTCCGTCCACGCCGCAGTGCGCGGCCAGCGA
GGCCGGACCGTTGCCCAGACGCTTGCCCAAGAGGCGCGCTCGCGCATCGGCGCTTCGAGTTGCCCCTGGCAGCAG
ATTGACAGCATTCGCACCTTGTGCATTCTTGCCGACTATGAGGCCGGCTGCCGGAGGGGGCGACGGGCGTGGATG
GATATTGGTTAG
Gene >OphauG2|7627
ATGACACCAAGAAACGAGTCACATCGGACAAAGGTGACGCTGGCGTGCGAGAGCTGTCGCAAGCGAAGAGTGAGC
CATCATCAGACCGGCCGTGGGCAGAGCAAAGCGTGGCTGACGGAGCCTTGGGTTGGGGCCTCTCTAGATCAAGTG
CACCGGGACCCAGCCCTGCAAAAACTGCGCCGACAGCGGACGGCAATGCGCCTTTGATGGCAAGAATCGCAGCCG
ACGCGGCCCTCGGCCTCGCAAGATTAGCAGCCAGGCGGCTCGCCAGACGGCCGCTCGCCAGACCATGGCGGCCCA
GACCATGGCTCCCAAGACCATGGCCCCCAAGACGGCTGTGGTGGTCCCGGCCGACAGCGACGACAGCGACGACGA
CGACGAGTCGGACGACGACTTCATCGCGCAGACGGTGCAGTGGCAGCCCATGCTCAAGGAGCTCTTCTTCTCCCA
AGGCCACCCTGCCGACACAACGTTGGTTTGCCGTGGCCCGCGCCGCCCTCGCATCATCATGGCTGACTGGCCGTG
CTCAGGCTTGTTGAGAGCGACCTGGATCTCGTCTGCCACTTGATTGAGCTCTTCTACACCCGGGCCAGCATGCAG
CTGAGGGCCCTGCTGACGCCTGCCCAGCTCCACGAGCAGCTGGTCCAGCGCCGACTGTCGCAATGCCTCGTGCTG
GCCATGTGTTGCTGTAGCCTGCGCTTCTCCGTCCACGCCGCAGTGCGCGGCCAGCGAGGCCGGACCGTTGCCCAG
ACGCTTGCCCAAGAGGCGCGCTCGCGCATCGGCGCTTCGAGTTGCCCCTGGCAGCAGATTGACAGCATTCGCACC
TTGTGCATTCTTGCCGACTATGAGGCCGGCTGCCGGAGGGGGCGACGGGCGTGGATGGATATTGGTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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