© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|7571 |
| Gene name | |
| Location | Contig_9:14047..15492 |
| Strand | - |
| Gene length (bp) | 1445 |
| Transcript length (bp) | 1374 |
| Coding sequence length (bp) | 1374 |
| Protein length (aa) | 458 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01545 | Cation_efflux | Cation efflux family | 5.2E-13 | 158 | 362 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14329|ZRG17_SCHPO | Probable zinc transporter zrg17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=zrg17 PE=1 SV=1 | 64 | 454 | 2.0E-35 |
| sp|P53735|ZRG17_YEAST | Protein ZRG17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRG17 PE=1 SV=1 | 52 | 389 | 1.0E-21 |
| sp|Q6ICY4|MTPC2_ARATH | Metal tolerance protein C2 OS=Arabidopsis thaliana GN=MTPC2 PE=2 SV=1 | 208 | 422 | 1.0E-09 |
| sp|Q6P0D1|ZNT6_DANRE | Zinc transporter 6 OS=Danio rerio GN=slc30a6 PE=2 SV=1 | 166 | 431 | 3.0E-09 |
| sp|Q6GPY1|ZNT6B_XENLA | Zinc transporter 6-B OS=Xenopus laevis GN=slc30a6-b PE=2 SV=1 | 166 | 431 | 5.0E-08 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14329|ZRG17_SCHPO | Probable zinc transporter zrg17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=zrg17 PE=1 SV=1 | 64 | 454 | 2.0E-35 |
| sp|P53735|ZRG17_YEAST | Protein ZRG17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRG17 PE=1 SV=1 | 52 | 389 | 1.0E-21 |
| sp|Q6ICY4|MTPC2_ARATH | Metal tolerance protein C2 OS=Arabidopsis thaliana GN=MTPC2 PE=2 SV=1 | 208 | 422 | 1.0E-09 |
| sp|Q6P0D1|ZNT6_DANRE | Zinc transporter 6 OS=Danio rerio GN=slc30a6 PE=2 SV=1 | 166 | 431 | 3.0E-09 |
| sp|Q6GPY1|ZNT6B_XENLA | Zinc transporter 6-B OS=Xenopus laevis GN=slc30a6-b PE=2 SV=1 | 166 | 431 | 5.0E-08 |
| sp|Q8BJM5|ZNT6_MOUSE | Zinc transporter 6 OS=Mus musculus GN=Slc30a6 PE=1 SV=1 | 166 | 431 | 7.0E-08 |
| sp|Q6NXT4|ZNT6_HUMAN | Zinc transporter 6 OS=Homo sapiens GN=SLC30A6 PE=1 SV=2 | 166 | 431 | 1.0E-07 |
| sp|Q5ZIH3|ZNT6_CHICK | Zinc transporter 6 OS=Gallus gallus GN=SLC30A6 PE=1 SV=1 | 142 | 431 | 2.0E-07 |
| sp|Q6AZN8|ZNT6A_XENLA | Zinc transporter 6-A OS=Xenopus laevis GN=slc30a6-a PE=2 SV=1 | 142 | 431 | 2.0E-07 |
| sp|Q0VC54|ZNT6_BOVIN | Zinc transporter 6 OS=Bos taurus GN=SLC30A6 PE=2 SV=1 | 166 | 431 | 2.0E-07 |
| sp|Q5I0B2|ZNT6_XENTR | Zinc transporter 6 OS=Xenopus tropicalis GN=slc30a6 PE=2 SV=1 | 166 | 431 | 2.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0006812 | cation transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0008324 | cation transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0008150 | biological_process | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0051234 | establishment of localization | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0006810 | transport | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0006811 | ion transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 57 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 147 | 164 | 17 |
| 2 | 174 | 196 | 22 |
| 3 | 217 | 236 | 19 |
| 4 | 261 | 283 | 22 |
| 5 | 304 | 326 | 22 |
| 6 | 331 | 353 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|7571 MDPHSDPTLPFTQAPPTLVVHEADAPLQSSKSSESSPLRSFYLASPASTLLSPVYAMSSDGDGSDTGPAPSPASS NPFNFQTRVISTSPVKSNIGQRRGHKYKHSSVSTQHQIFQEPPPRPPAVLPASLPIPTLSEACKSMRREQRTRLY WSGCHVAVAIFIIFRSEGSLAAMALSHLVFFDAGSAALSVAVEVLGNFEAWRRSSIRHPFGLERVEVLAGFALSI FLLFGGFDLVSHNLKHFLESMGHHEAHHEHSHNHTTSASVMLVAAVAAASSLISAYGVKNHARIAKLMRVSYLSN LPSVLSNPFHFLTLFFSSLIATLPLVSMSLYTWLDGIICAVIALAMFGLGMRVAIAQGLMLLMSYGGNRGNDGVS AVLREIESESAVSKIDEAQFWQVHYGLCIATITLRVAKTCDELSLCKLRNRISSLIQNRLGEGYGTGGSVRWEVT LQMSTDA* |
| Coding | >OphauG2|7571 ATGGACCCGCACTCAGACCCAACACTGCCCTTCACTCAAGCTCCACCGACACTCGTTGTTCACGAAGCCGACGCT CCTTTGCAATCTTCCAAGTCTTCCGAGTCTTCCCCTCTTCGCTCGTTTTATCTCGCCTCTCCGGCATCAACTCTC CTTTCTCCCGTCTACGCCATGTCGAGCGATGGCGATGGCTCCGACACGGGGCCCGCCCCATCTCCCGCCTCCTCG AATCCTTTCAACTTTCAGACTCGGGTAATATCTACGTCACCAGTCAAGTCGAACATTGGCCAGCGCCGCGGCCAT AAATATAAACACAGCAGCGTGTCGACCCAACACCAAATCTTCCAGGAGCCTCCTCCGCGCCCACCCGCCGTTCTT CCCGCATCGCTTCCTATACCCACTCTTTCCGAGGCTTGCAAGAGTATGCGCCGCGAGCAACGCACCCGTCTCTAC TGGAGTGGCTGCCATGTTGCTGTCGCCATCTTCATCATCTTCCGCTCCGAGGGCTCACTCGCTGCCATGGCCCTG TCCCATCTTGTCTTCTTTGACGCCGGAAGTGCTGCTCTCAGCGTTGCCGTCGAGGTGCTTGGCAACTTTGAGGCT TGGAGGCGCAGCAGCATACGCCACCCCTTTGGCCTTGAGAGGGTAGAGGTCCTTGCCGGCTTTGCCCTCTCCATT TTCCTTCTCTTTGGCGGCTTTGATCTCGTCTCTCATAACCTCAAGCACTTTCTCGAATCCATGGGTCACCATGAA GCCCATCACGAGCATTCTCATAATCACACCACCTCTGCATCTGTCATGTTGGTTGCTGCCGTTGCTGCAGCAAGC AGTCTCATTTCAGCCTACGGCGTCAAGAACCATGCCCGCATAGCAAAACTCATGCGGGTCTCATATTTGTCCAAT CTTCCCAGCGTCTTGTCCAATCCCTTTCATTTCCTTACTCTCTTTTTCTCATCACTCATAGCAACTCTGCCCCTC GTGTCCATGTCTCTATATACTTGGCTCGATGGTATTATTTGCGCCGTCATCGCATTGGCCATGTTTGGCCTAGGA ATGCGTGTCGCAATAGCACAGGGCCTCATGCTCCTCATGTCATATGGGGGTAATAGAGGCAACGATGGTGTTTCG GCCGTTCTCCGCGAAATCGAATCTGAATCGGCAGTGTCCAAAATCGACGAGGCTCAGTTTTGGCAGGTTCACTAT GGCCTTTGTATTGCAACCATTACCCTTCGTGTTGCCAAGACCTGTGATGAGTTGTCTCTCTGCAAGCTTCGCAAT CGCATTTCATCACTCATACAAAACCGCCTCGGCGAAGGCTACGGCACTGGGGGAAGTGTTCGGTGGGAGGTGACG CTACAGATGAGTACAGATGCGTGA |
| Transcript | >OphauG2|7571 ATGGACCCGCACTCAGACCCAACACTGCCCTTCACTCAAGCTCCACCGACACTCGTTGTTCACGAAGCCGACGCT CCTTTGCAATCTTCCAAGTCTTCCGAGTCTTCCCCTCTTCGCTCGTTTTATCTCGCCTCTCCGGCATCAACTCTC CTTTCTCCCGTCTACGCCATGTCGAGCGATGGCGATGGCTCCGACACGGGGCCCGCCCCATCTCCCGCCTCCTCG AATCCTTTCAACTTTCAGACTCGGGTAATATCTACGTCACCAGTCAAGTCGAACATTGGCCAGCGCCGCGGCCAT AAATATAAACACAGCAGCGTGTCGACCCAACACCAAATCTTCCAGGAGCCTCCTCCGCGCCCACCCGCCGTTCTT CCCGCATCGCTTCCTATACCCACTCTTTCCGAGGCTTGCAAGAGTATGCGCCGCGAGCAACGCACCCGTCTCTAC TGGAGTGGCTGCCATGTTGCTGTCGCCATCTTCATCATCTTCCGCTCCGAGGGCTCACTCGCTGCCATGGCCCTG TCCCATCTTGTCTTCTTTGACGCCGGAAGTGCTGCTCTCAGCGTTGCCGTCGAGGTGCTTGGCAACTTTGAGGCT TGGAGGCGCAGCAGCATACGCCACCCCTTTGGCCTTGAGAGGGTAGAGGTCCTTGCCGGCTTTGCCCTCTCCATT TTCCTTCTCTTTGGCGGCTTTGATCTCGTCTCTCATAACCTCAAGCACTTTCTCGAATCCATGGGTCACCATGAA GCCCATCACGAGCATTCTCATAATCACACCACCTCTGCATCTGTCATGTTGGTTGCTGCCGTTGCTGCAGCAAGC AGTCTCATTTCAGCCTACGGCGTCAAGAACCATGCCCGCATAGCAAAACTCATGCGGGTCTCATATTTGTCCAAT CTTCCCAGCGTCTTGTCCAATCCCTTTCATTTCCTTACTCTCTTTTTCTCATCACTCATAGCAACTCTGCCCCTC GTGTCCATGTCTCTATATACTTGGCTCGATGGTATTATTTGCGCCGTCATCGCATTGGCCATGTTTGGCCTAGGA ATGCGTGTCGCAATAGCACAGGGCCTCATGCTCCTCATGTCATATGGGGGTAATAGAGGCAACGATGGTGTTTCG GCCGTTCTCCGCGAAATCGAATCTGAATCGGCAGTGTCCAAAATCGACGAGGCTCAGTTTTGGCAGGTTCACTAT GGCCTTTGTATTGCAACCATTACCCTTCGTGTTGCCAAGACCTGTGATGAGTTGTCTCTCTGCAAGCTTCGCAAT CGCATTTCATCACTCATACAAAACCGCCTCGGCGAAGGCTACGGCACTGGGGGAAGTGTTCGGTGGGAGGTGACG CTACAGATGAGTACAGATGCGTGA |
| Gene | >OphauG2|7571 ATGGACCCGCACTCAGACCCAACACTGCCCTTCACTCAAGCTCCACCGACACTCGTTGTTCACGAAGCCGACGCT CCTTTGCAATCTTCCAAGTCTTCCGAGTCTTCCCCTCTTCGCTCGTTTTATCTCGCCTCTCCGGCATCAACTCTC CTTTCTCCCGTCTACGCCATGTCGAGCGATGGCGATGGCTCCGACACGGGGCCCGCCCCATCTCCCGCCTCCTCG AATCCTTTCAACTTTCAGACTCGGGTAATATCTACGTCACCAGTCAAGTCGGTAAGTCAGGAAATCTCGTGTCCG AGTCCCATTGTGGTGGAGGAGGCGCACGGGCTAATATCTATTACCAGAACATTGGCCAGCGCCGCGGCCATAAAT ATAAACACAGCAGCGTGTCGACCCAACACCAAATCTTCCAGGAGCCTCCTCCGCGCCCACCCGCCGTTCTTCCCG CATCGCTTCCTATACCCACTCTTTCCGAGGCTTGCAAGAGTATGCGCCGCGAGCAACGCACCCGTCTCTACTGGA GTGGCTGCCATGTTGCTGTCGCCATCTTCATCATCTTCCGCTCCGAGGGCTCACTCGCTGCCATGGCCCTGTCCC ATCTTGTCTTCTTTGACGCCGGAAGTGCTGCTCTCAGCGTTGCCGTCGAGGTGCTTGGCAACTTTGAGGCTTGGA GGCGCAGCAGCATACGCCACCCCTTTGGCCTTGAGAGGGTAGAGGTCCTTGCCGGCTTTGCCCTCTCCATTTTCC TTCTCTTTGGCGGCTTTGATCTCGTCTCTCATAACCTCAAGCACTTTCTCGAATCCATGGGTCACCATGAAGCCC ATCACGAGCATTCTCATAATCACACCACCTCTGCATCTGTCATGTTGGTTGCTGCCGTTGCTGCAGCAAGCAGTC TCATTTCAGCCTACGGCGTCAAGAACCATGCCCGCATAGCAAAACTCATGCGGGTCTCATATTTGTCCAATCTTC CCAGCGTCTTGTCCAATCCCTTTCATTTCCTTACTCTCTTTTTCTCATCACTCATAGCAACTCTGCCCCTCGTGT CCATGTCTCTATATACTTGGCTCGATGGTATTATTTGCGCCGTCATCGCATTGGCCATGTTTGGCCTAGGAATGC GTGTCGCAATAGCACAGGGCCTCATGCTCCTCATGTCATATGGGGGTAATAGAGGCAACGATGGTGTTTCGGCCG TTCTCCGCGAAATCGAATCTGAATCGGCAGTGTCCAAAATCGACGAGGCTCAGTTTTGGCAGGTTCACTATGGCC TTTGTATTGCAACCATTACCCTTCGTGTTGCCAAGACCTGTGATGAGTTGTCTCTCTGCAAGCTTCGCAATCGCA TTTCATCACTCATACAAAACCGCCTCGGCGAAGGCTACGGCACTGGGGGAAGTGTTCGGTGGGAGGTGACGCTAC AGATGAGTACAGATGCGTGA |