© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|7548 |
| Gene name | |
| Location | Contig_893:7048..7639 |
| Strand | - |
| Gene length (bp) | 591 |
| Transcript length (bp) | 405 |
| Coding sequence length (bp) | 405 |
| Protein length (aa) | 135 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF09044 | Kp4 | Kp4 | 8.3E-30 | 5 | 122 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q90121|KP4T_UMV4 | KP4 killer toxin OS=Ustilago maydis P4 virus GN=M2A PE=1 SV=1 | 3 | 122 | 9.0E-15 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005576 | extracellular region | Yes |
| GO:0005575 | cellular_component | No |
| GO:0110165 | cellular anatomical entity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 17 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|7548 MASFALIASFIATAAALGINCRGSGACNLNDASLSDVLTQVRQIQARGLGSHHYATGVQLACAQGKYASICAFYQ SGASGTADFAAELLQGLINHKCTQCGSNPTQPGNDVSKGQLTVNIVSQPCCHGTCQCPI* |
| Coding | >OphauG2|7548 ATGGCGTCTTTTGCCTTGATTGCCAGCTTCATTGCCACCGCGGCGGCGCTTGGCATCAATTGCCGCGGCTCAGGC GCTTGCAATCTCAACGATGCTAGTCTCTCAGATGTCTTGACCCAAGTCCGGCAGATACAGGCTCGAGGCCTGGGC TCGCATCATTATGCCACTGGAGTTCAATTGGCTTGCGCCCAAGGCAAATATGCTTCCATTTGTGCCTTTTATCAG AGCGGGGCCAGTGGCACGGCAGATTTCGCTGCCGAGCTTCTCCAGGGCCTGATTAACCACAAATGCACACAGTGT GGCAGCAATCCAACGCAGCCTGGCAACGATGTCAGCAAGGGCCAGTTGACGGTGAATATTGTGAGCCAGCCTTGC TGCCATGGCACCTGCCAGTGTCCCATCTAG |
| Transcript | >OphauG2|7548 ATGGCGTCTTTTGCCTTGATTGCCAGCTTCATTGCCACCGCGGCGGCGCTTGGCATCAATTGCCGCGGCTCAGGC GCTTGCAATCTCAACGATGCTAGTCTCTCAGATGTCTTGACCCAAGTCCGGCAGATACAGGCTCGAGGCCTGGGC TCGCATCATTATGCCACTGGAGTTCAATTGGCTTGCGCCCAAGGCAAATATGCTTCCATTTGTGCCTTTTATCAG AGCGGGGCCAGTGGCACGGCAGATTTCGCTGCCGAGCTTCTCCAGGGCCTGATTAACCACAAATGCACACAGTGT GGCAGCAATCCAACGCAGCCTGGCAACGATGTCAGCAAGGGCCAGTTGACGGTGAATATTGTGAGCCAGCCTTGC TGCCATGGCACCTGCCAGTGTCCCATCTAG |
| Gene | >OphauG2|7548 ATGGCGTCTTTTGCCTTGATTGCCAGCTTCATTGCCACCGCGGCGGCGCTTGGCATCAATTGCCGCGGCTCAGGC GCTTGCAATCTCAACGATGCTAGTCTCTCAGATGTCTTGACCCAAGTCCGGCAGATACAGGCTCGAGGCCTGGGC TCGCATCATTATGCCACTGGAGGTAAGGCGACAACAAGAGATGCTCGAGGCGTGTGTCTGCTTTTCTTTTCTTTT CTTTTCTTTTTTCTATATTTTTTCTTTTTTTTTTCTGTATTTTGTGTTTTTTTCTTTGTGTGTTTTTTTTTTCCA TGTTTTGTTTTTTTCTACATCTTTAAACATTCTTTACTGACTCGCTTGCATCGTCTAGTTCAATTGGCTTGCGCC CAAGGCAAATATGCTTCCATTTGTGCCTTTTATCAGAGCGGGGCCAGTGGCACGGCAGATTTCGCTGCCGAGCTT CTCCAGGGCCTGATTAACCACAAATGCACACAGTGTGGCAGCAATCCAACGCAGCCTGGCAACGATGTCAGCAAG GGCCAGTTGACGGTGAATATTGTGAGCCAGCCTTGCTGCCATGGCACCTGCCAGTGTCCCATCTAG |