© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauG2|7535 |
| Gene name | |
| Location | Contig_89:29646..31850 |
| Strand | - |
| Gene length (bp) | 2204 |
| Transcript length (bp) | 1977 |
| Coding sequence length (bp) | 1977 |
| Protein length (aa) | 659 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF09825 | BPL_N | Biotin-protein ligase, N terminal | 1.2E-111 | 7 | 287 |
| PF03099 | BPL_LplA_LipB | Biotin/lipoate A/B protein ligase family | 8.9E-19 | 394 | 535 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P48445|BPL1_YEAST | Biotin--protein ligase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BPL1 PE=1 SV=1 | 6 | 658 | 2.0E-117 |
| sp|O14353|BPL1_SCHPO | Biotin--protein ligase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bpl1 PE=3 SV=1 | 6 | 657 | 3.0E-111 |
| sp|P50747|BPL1_HUMAN | Biotin--protein ligase OS=Homo sapiens GN=HLCS PE=1 SV=1 | 7 | 657 | 2.0E-39 |
| sp|Q920N2|BPL1_MOUSE | Biotin--protein ligase OS=Mus musculus GN=Hlcs PE=1 SV=1 | 337 | 657 | 3.0E-38 |
| sp|Q9SL92|HCS1_ARATH | Biotin--protein ligase 1, chloroplastic OS=Arabidopsis thaliana GN=HCS1 PE=1 SV=2 | 386 | 658 | 2.0E-37 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P48445|BPL1_YEAST | Biotin--protein ligase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BPL1 PE=1 SV=1 | 6 | 658 | 2.0E-117 |
| sp|O14353|BPL1_SCHPO | Biotin--protein ligase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bpl1 PE=3 SV=1 | 6 | 657 | 3.0E-111 |
| sp|P50747|BPL1_HUMAN | Biotin--protein ligase OS=Homo sapiens GN=HLCS PE=1 SV=1 | 7 | 657 | 2.0E-39 |
| sp|Q920N2|BPL1_MOUSE | Biotin--protein ligase OS=Mus musculus GN=Hlcs PE=1 SV=1 | 337 | 657 | 3.0E-38 |
| sp|Q9SL92|HCS1_ARATH | Biotin--protein ligase 1, chloroplastic OS=Arabidopsis thaliana GN=HCS1 PE=1 SV=2 | 386 | 658 | 2.0E-37 |
| sp|F4I4W2|HCS2_ARATH | Biotin--protein ligase 2 OS=Arabidopsis thaliana GN=HCS2 PE=2 SV=1 | 386 | 658 | 8.0E-37 |
| sp|Q9PL03|Y305_CHLMU | Uncharacterized protein TC_0305 OS=Chlamydia muridarum (strain MoPn / Nigg) GN=TC_0305 PE=3 SV=1 | 8 | 227 | 5.0E-26 |
| sp|O84038|Y035_CHLTR | Uncharacterized protein CT_035 OS=Chlamydia trachomatis (strain D/UW-3/Cx) GN=CT_035 PE=3 SV=1 | 8 | 249 | 8.0E-23 |
| sp|Q9Z953|Y128_CHLPN | Uncharacterized protein CPn_0128/CP_0643/CPj0128/CpB0130 OS=Chlamydia pneumoniae GN=CPn_0128 PE=3 SV=1 | 5 | 262 | 1.0E-21 |
| sp|P06709|BIRA_ECOLI | Bifunctional ligase/repressor BirA OS=Escherichia coli (strain K12) GN=birA PE=1 SV=1 | 397 | 582 | 2.0E-07 |
| sp|P46363|BIRA_HAEIN | Bifunctional ligase/repressor BirA OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=birA PE=3 SV=1 | 394 | 624 | 5.0E-07 |
| sp|Q9JWI7|BICOA_NEIMA | Bifunctional enzyme BirA/CoaX OS=Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) GN=birA/coaX PE=3 SV=1 | 426 | 582 | 6.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0036211 | protein modification process | Yes |
| GO:0044238 | primary metabolic process | No |
| GO:0043412 | macromolecule modification | No |
| GO:0008152 | metabolic process | No |
| GO:0019538 | protein metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0043170 | macromolecule metabolic process | No |
| Orthofinder run ID | 4 |
| Orthogroup | 3359 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauG2|7535 MSSRRLNVLVYTGTGTSVESVRQCVYSLQCLVSDTYAVAPVNETTLLKEPWAATCALLVIPGGADLGYCRVLNGA GNRLISDYVRRGGAYLGFCAGAYYASGRCEFEVGNGELEVIGSRELALFPGICRGAAFSGFEYGSERGARACHVA VHGGVFEPQQAVPDSFACYFNGGGVFVDAASVTSRKVQVLASYRDDIHVDGGDGKAAMVLCHVGEGKALLTGPHP EFAAANLSPQPSLPGYDRLIQELEANDKARVSFLRACLCKLGLEVGLDDAPVATLSSIYLCSTDPPRVARLVDAW HLIADNSNGQLLIRGESDTFLIELQQPCAGRMEPDRPQGIIDYTSITKHIIPHQETLPPPSLTPHWNHELYFSSL ERFHAEKNNVNRWGSLFMYGEVVTSTNSLLEKNPAFMSTLPTGFVFSASTQLSARGRGNNAWVAPRGALMFSAII SHPARLAASRPIVFTQYVAAIAIVEAIQSLGAGYEKLPVKLKWPNDIYALDPASASQRYVKVGGILSQCCYFDGS YQIVLGIGINASNPRPTTSLSSLAPPHAAPLQLEVLLARLLASLEAAYSQFLREGFSIDLEHRYYRHWLHTGQLV QLDTQGGERARVLGITSDWGMLRVEQTDQDGRGTGKIWTLQSDENSFDFWKGLVRRKL* |
| Coding | >OphauG2|7535 ATGTCCAGCAGACGGCTCAACGTCCTTGTATACACGGGCACCGGCACCAGCGTCGAGTCGGTTCGGCAGTGCGTC TACTCGCTGCAATGCCTAGTCTCCGACACATACGCCGTTGCGCCAGTCAACGAGACAACGCTTCTCAAGGAGCCC TGGGCAGCGACGTGTGCTCTTCTTGTCATCCCGGGCGGCGCCGACCTGGGCTACTGCCGCGTCCTCAACGGGGCT GGAAACCGGCTCATCAGCGACTACGTCCGGCGAGGCGGGGCCTATCTCGGCTTCTGTGCTGGCGCCTACTATGCA AGTGGCCGCTGCGAGTTTGAGGTGGGCAATGGCGAGCTCGAGGTTATCGGAAGCCGCGAGCTGGCCCTGTTCCCC GGCATCTGTCGCGGCGCTGCCTTTTCAGGCTTCGAGTACGGCAGCGAGAGGGGAGCCCGGGCCTGTCATGTCGCA GTCCATGGTGGCGTCTTTGAGCCCCAGCAGGCCGTGCCAGACAGCTTTGCCTGCTACTTCAACGGCGGCGGCGTC TTTGTCGATGCCGCCAGCGTCACAAGCCGCAAGGTGCAAGTCTTGGCCTCGTATCGCGACGACATTCATGTGGAT GGTGGTGACGGCAAGGCTGCCATGGTTCTGTGCCACGTGGGCGAGGGCAAGGCGCTCCTCACAGGGCCGCATCCC GAATTTGCTGCTGCCAATCTCTCGCCTCAGCCCAGCCTGCCCGGATACGACCGGCTCATTCAGGAGCTCGAGGCC AACGATAAAGCGCGCGTCAGCTTCCTCAGGGCCTGCCTGTGCAAGCTGGGGCTTGAGGTTGGTCTAGACGACGCT CCAGTGGCGACGCTGTCGAGCATTTACCTTTGCTCCACCGACCCTCCCAGAGTCGCGCGCCTTGTCGACGCCTGG CACCTGATTGCAGACAACAGCAACGGCCAGCTTTTGATCCGCGGCGAATCAGACACATTTCTCATTGAGTTGCAA CAGCCATGTGCTGGCCGCATGGAGCCCGACAGGCCGCAAGGAATCATCGACTATACGTCTATTACCAAGCACATT ATCCCTCACCAAGAGACACTGCCACCACCCAGTCTGACGCCGCACTGGAACCACGAGCTCTACTTCTCAAGCCTG GAGCGCTTCCACGCAGAAAAAAACAATGTCAATCGCTGGGGCTCCTTGTTCATGTATGGAGAAGTTGTCACAAGC ACCAACTCGCTTCTAGAAAAAAACCCAGCCTTCATGTCTACATTGCCCACGGGATTCGTCTTTTCCGCATCCACT CAACTTTCTGCGCGGGGCCGTGGAAACAACGCTTGGGTCGCTCCTCGCGGTGCCCTCATGTTTTCCGCCATCATC AGTCATCCAGCCCGACTCGCTGCGTCTCGGCCCATCGTCTTTACTCAATATGTGGCTGCCATTGCCATTGTCGAG GCTATTCAGTCTCTGGGTGCAGGATACGAAAAGCTGCCAGTCAAGTTAAAATGGCCCAACGATATTTATGCTCTC GATCCCGCTTCTGCCTCGCAACGCTATGTCAAGGTTGGCGGTATTCTTAGCCAGTGCTGCTACTTTGATGGTTCC TATCAGATTGTCCTGGGCATAGGCATAAATGCAAGCAACCCACGCCCGACTACCTCTCTTTCCAGCCTCGCTCCG CCTCATGCAGCCCCTCTGCAACTTGAAGTCCTCCTTGCGCGTCTGCTTGCTAGTCTTGAGGCTGCCTACTCGCAG TTTCTGCGCGAAGGCTTCTCGATCGATCTTGAACATCGCTACTATCGTCATTGGCTGCACACCGGACAACTGGTG CAACTCGATACCCAAGGCGGCGAGCGGGCGCGTGTACTTGGCATCACAAGCGACTGGGGAATGCTGCGCGTCGAA CAGACTGACCAAGACGGCAGGGGCACAGGCAAGATTTGGACCCTGCAGAGCGATGAAAACAGCTTCGACTTCTGG AAAGGTCTTGTACGCAGAAAGCTGTAG |
| Transcript | >OphauG2|7535 ATGTCCAGCAGACGGCTCAACGTCCTTGTATACACGGGCACCGGCACCAGCGTCGAGTCGGTTCGGCAGTGCGTC TACTCGCTGCAATGCCTAGTCTCCGACACATACGCCGTTGCGCCAGTCAACGAGACAACGCTTCTCAAGGAGCCC TGGGCAGCGACGTGTGCTCTTCTTGTCATCCCGGGCGGCGCCGACCTGGGCTACTGCCGCGTCCTCAACGGGGCT GGAAACCGGCTCATCAGCGACTACGTCCGGCGAGGCGGGGCCTATCTCGGCTTCTGTGCTGGCGCCTACTATGCA AGTGGCCGCTGCGAGTTTGAGGTGGGCAATGGCGAGCTCGAGGTTATCGGAAGCCGCGAGCTGGCCCTGTTCCCC GGCATCTGTCGCGGCGCTGCCTTTTCAGGCTTCGAGTACGGCAGCGAGAGGGGAGCCCGGGCCTGTCATGTCGCA GTCCATGGTGGCGTCTTTGAGCCCCAGCAGGCCGTGCCAGACAGCTTTGCCTGCTACTTCAACGGCGGCGGCGTC TTTGTCGATGCCGCCAGCGTCACAAGCCGCAAGGTGCAAGTCTTGGCCTCGTATCGCGACGACATTCATGTGGAT GGTGGTGACGGCAAGGCTGCCATGGTTCTGTGCCACGTGGGCGAGGGCAAGGCGCTCCTCACAGGGCCGCATCCC GAATTTGCTGCTGCCAATCTCTCGCCTCAGCCCAGCCTGCCCGGATACGACCGGCTCATTCAGGAGCTCGAGGCC AACGATAAAGCGCGCGTCAGCTTCCTCAGGGCCTGCCTGTGCAAGCTGGGGCTTGAGGTTGGTCTAGACGACGCT CCAGTGGCGACGCTGTCGAGCATTTACCTTTGCTCCACCGACCCTCCCAGAGTCGCGCGCCTTGTCGACGCCTGG CACCTGATTGCAGACAACAGCAACGGCCAGCTTTTGATCCGCGGCGAATCAGACACATTTCTCATTGAGTTGCAA CAGCCATGTGCTGGCCGCATGGAGCCCGACAGGCCGCAAGGAATCATCGACTATACGTCTATTACCAAGCACATT ATCCCTCACCAAGAGACACTGCCACCACCCAGTCTGACGCCGCACTGGAACCACGAGCTCTACTTCTCAAGCCTG GAGCGCTTCCACGCAGAAAAAAACAATGTCAATCGCTGGGGCTCCTTGTTCATGTATGGAGAAGTTGTCACAAGC ACCAACTCGCTTCTAGAAAAAAACCCAGCCTTCATGTCTACATTGCCCACGGGATTCGTCTTTTCCGCATCCACT CAACTTTCTGCGCGGGGCCGTGGAAACAACGCTTGGGTCGCTCCTCGCGGTGCCCTCATGTTTTCCGCCATCATC AGTCATCCAGCCCGACTCGCTGCGTCTCGGCCCATCGTCTTTACTCAATATGTGGCTGCCATTGCCATTGTCGAG GCTATTCAGTCTCTGGGTGCAGGATACGAAAAGCTGCCAGTCAAGTTAAAATGGCCCAACGATATTTATGCTCTC GATCCCGCTTCTGCCTCGCAACGCTATGTCAAGGTTGGCGGTATTCTTAGCCAGTGCTGCTACTTTGATGGTTCC TATCAGATTGTCCTGGGCATAGGCATAAATGCAAGCAACCCACGCCCGACTACCTCTCTTTCCAGCCTCGCTCCG CCTCATGCAGCCCCTCTGCAACTTGAAGTCCTCCTTGCGCGTCTGCTTGCTAGTCTTGAGGCTGCCTACTCGCAG TTTCTGCGCGAAGGCTTCTCGATCGATCTTGAACATCGCTACTATCGTCATTGGCTGCACACCGGACAACTGGTG CAACTCGATACCCAAGGCGGCGAGCGGGCGCGTGTACTTGGCATCACAAGCGACTGGGGAATGCTGCGCGTCGAA CAGACTGACCAAGACGGCAGGGGCACAGGCAAGATTTGGACCCTGCAGAGCGATGAAAACAGCTTCGACTTCTGG AAAGGTCTTGTACGCAGAAAGCTGTAG |
| Gene | >OphauG2|7535 ATGTCCAGCAGACGGCTCAACGTCCTTGTATACACGGGCAGGCAGTGCCTTTTCTTGCCATGGACTGGCGCCAGA GGCTGACTCGGCTCGCCAGGCACCGGCACCAGCGTCGAGTCGGTTCGGCAGTGCGTCTACTCGCTGCAATGCCTA GTCTCCGACACATACGCCGTTGCGCCAGTCAACGAGACAACGCTTCTCAAGGAGCCCTGGGCAGCGACGTGTGCT CTTCTTGTCATCCCGGGCGGCGCCGACCTGGGCTACTGCCGCGTCCTCAACGGGGCTGGAAACCGGCTCATCAGC GACTACGTCCGGCGAGGCGGGGCCTATCTCGGCTTCTGTGCTGGCGCCTACTATGCAAGTGGCCGCTGCGAGTTT GAGGTGGGCAATGGCGAGCTCGAGGTTATCGGAAGCCGCGAGCTGGCCCTGTTCCCCGGCATCTGTCGCGGCGCT GCCTTTTCAGGCTTCGAGTACGGCAGCGAGAGGGGAGCCCGGGCCTGTCATGTCGCAGTCCATGGTGGCGTCTTT GAGCCCCAGCAGGCCGTGCCAGACAGCTTTGCCTGCTACTTCAACGGCGGCGGCGTCTTTGTCGATGCCGCCAGC GTCACAAGCCGCAAGGTGCAAGTCTTGGCCTCGTATCGCGACGACATTCATGTGGATGGTGGTGACGGCAAGGCT GCCATGGTTCTGTGCCACGTGGGCGAGGGCAAGGCGCTCCTCACAGGGCCGCATCCCGAGTGAGTGAAGCGCTTG TCGTTGCCGCTCAAAGCGCTCACGACCCCAGATTTGCTGCTGCCAATCTCTCGCCTCAGCCCAGCCTGCCCGGAT ACGACCGGCTCATTCAGGAGCTCGAGGCCAACGATAAAGCGCGCGTCAGCTTCCTCAGGGCCTGCCTGTGCAAGC TGGGGCTTGAGGTTGGTCTAGACGACGCTCCAGTGGCGACGCTGTCGAGCATTTACCTTTGCTCCACCGACCCTC CCAGAGTCGCGCGCCTTGTCGACGCCTGGCACCTGATTGCAGACAACAGCAACGGCCAGCTTTTGATCCGCGGCG AATCAGACACATTTCTCATTGAGTTGCAACAGCCATGTGCTGGCCGCATGGAGCCCGACAGGCCGCAAGGAATCA TCGACTATACGTCTATTACCAAGCACATTATCCCTCACCAAGAGACACTGCCACCACCCAGTCTGACGCCGCACT GGAACCACGAGCTCTACTTCTCAAGCCTGGAGCGCTTCCACGCAGAAAAAAACAATGTCAATCGCTGGGGCTCCT TGTTCATGTATGGAGAAGTTGTCACAAGCACCAACTCGCTTCTAGAAAAGTATTCCCTCATCCTCCCCCTTGCTT CCCATTCCCATCAAAAGCCTCTGGCTCAACTGCCCATTAGAAACCCAGCCTTCATGTCTACATTGCCCACGGGAT TCGTCTTTTCCGCATCCACTCAACTTTCTGCGCGGGGCCGTGGAAACAACGCTTGGGTCGCTCCTCGCGGTGCCC TCATGTTTTCCGCCATCATCAGTCATCCAGCCCGACTCGCTGCGTCTCGGCCCATCGTCTTTACTCAATATGTGG CTGCCATTGCCATTGTCGAGGCTATTCAGTCTCTGGGTGCAGGATACGAAAAGCTGCCAGTCAAGTTAAAATGGC CCAACGATATTTGTGCCTCCCCATGACCAATACTCGATACACCGGTTGTATTATGCTGACTGCGTGTAGATGCTC TCGATCCCGCTTCTGCCTCGCAACGCTATGTCAAGGTTGGCGGTATTCTTAGCCAGTGCTGCTACTTTGATGGTT CCTATCAGATTGTCCTGGGCATAGGCATAAATGCAAGCAACCCACGCCCGACTACCTCTCTTTCCAGCCTCGCTC CGCCTCATGCAGCCCCTCTGCAACTTGAAGTCCTCCTTGCGCGTCTGCTTGCTAGTCTTGAGGCTGCCTACTCGC AGTTTCTGCGCGAAGGCTTCTCGATCGATCTTGAACATCGCTACTATCGTCATTGGCTGCACACCGGACAACTGG TGCAACTCGATACCCAAGGCGGCGAGCGGGCGCGTGTACTTGGCATCACAAGCGACTGGGGAATGCTGCGCGTCG AACAGACTGACCAAGACGGCAGGGGCACAGGCAAGATTTGGACCCTGCAGAGCGATGAAAACAGCTTCGACTTCT GGAAAGGTCTTGTACGCAGAAAGCTGTAG |