Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauG2\|7457
Gene name
Location	Contig_87:30294..31218
Strand	-
Gene length (bp)	924
Transcript length (bp)	798
Coding sequence length (bp)	798
Protein length (aa)	266

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01997	Translin	Translin family	1.1E-54	40	243

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9JHB5\|TSNAX_RAT	Translin-associated protein X OS=Rattus norvegicus GN=Tsnax PE=1 SV=1	19	254	1.0E-21
sp\|Q9QZE7\|TSNAX_MOUSE	Translin-associated protein X OS=Mus musculus GN=Tsnax PE=1 SV=1	11	254	1.0E-21
sp\|Q5RC21\|TSNAX_PONAB	Translin-associated protein X OS=Pongo abelii GN=TSNAX PE=2 SV=1	20	254	4.0E-21
sp\|Q99598\|TSNAX_HUMAN	Translin-associated protein X OS=Homo sapiens GN=TSNAX PE=1 SV=1	20	254	4.0E-21
sp\|Q4R599\|TSNAX_MACFA	Translin-associated protein X OS=Macaca fascicularis GN=TSNAX PE=2 SV=1	20	254	5.0E-21

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9JHB5\|TSNAX_RAT	Translin-associated protein X OS=Rattus norvegicus GN=Tsnax PE=1 SV=1	19	254	1.0E-21
sp\|Q9QZE7\|TSNAX_MOUSE	Translin-associated protein X OS=Mus musculus GN=Tsnax PE=1 SV=1	11	254	1.0E-21
sp\|Q5RC21\|TSNAX_PONAB	Translin-associated protein X OS=Pongo abelii GN=TSNAX PE=2 SV=1	20	254	4.0E-21
sp\|Q99598\|TSNAX_HUMAN	Translin-associated protein X OS=Homo sapiens GN=TSNAX PE=1 SV=1	20	254	4.0E-21
sp\|Q4R599\|TSNAX_MACFA	Translin-associated protein X OS=Macaca fascicularis GN=TSNAX PE=2 SV=1	20	254	5.0E-21
sp\|O74955\|TSNAX_SCHPO	Translin-associated protein X homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC736.09c PE=3 SV=1	28	246	1.0E-17

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GO

GO Term	Description	Terminal node
GO:0043565	sequence-specific DNA binding	Yes
GO:0003674	molecular_function	No
GO:1901363	heterocyclic compound binding	No
GO:0003677	DNA binding	No
GO:0005488	binding	No
GO:0003676	nucleic acid binding	No
GO:0097159	organic cyclic compound binding	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 54	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauG2\|7457 MVGLKRDREGNSRPVIPDASSGPFGDMFCSFRDELDQHYDRKERIVKASRDVTAHAKKIIFALQRVKQLNCDFPA STQKDVDAHMSSIAKLLASIAPDLGPLNRHRYASQLRCLEELVEALSFAHYLRHQSIVSAPELQAAMPVMPGGTD TPLALSEHDYLFGLFDLFGELMRFATVRRDKVLPARKEGEQTHRPLLRDMQQLACAFELLPPQAGKDFGSKMEVM RQSVCKVEMLGYGLVVRGSERPNDWVPDMRDQASRPASPV*
Coding	>OphauG2\|7457 ATGGTAGGCCTCAAGCGGGACAGAGAGGGCAATTCGCGCCCTGTAATACCGGACGCGTCAAGCGGGCCGTTTGGC GACATGTTTTGCAGCTTCCGCGACGAGCTGGACCAGCATTATGATCGCAAGGAGCGAATTGTCAAGGCCAGCCGC GATGTGACGGCTCATGCCAAGAAGATTATTTTTGCCTTGCAACGAGTCAAGCAGCTTAATTGCGACTTTCCTGCC TCGACGCAAAAGGATGTTGATGCGCACATGTCTTCGATTGCCAAGCTGCTCGCATCAATTGCTCCCGACCTTGGT CCGCTAAATCGCCATCGCTATGCTTCGCAGCTGCGGTGCTTGGAAGAGCTTGTTGAAGCTCTTTCCTTTGCACAC TATCTGCGCCACCAGTCTATCGTTTCTGCGCCCGAGCTTCAGGCCGCGATGCCTGTAATGCCAGGGGGAACTGAC ACGCCATTGGCGCTGTCTGAGCACGACTATCTCTTTGGTCTTTTTGACTTGTTTGGCGAGCTGATGCGCTTTGCC ACTGTCAGACGAGACAAGGTGCTGCCAGCAAGAAAGGAGGGGGAGCAGACACATCGCCCGCTGCTGCGGGACATG CAGCAGCTTGCATGTGCGTTTGAACTACTACCGCCTCAAGCTGGCAAAGACTTTGGCTCCAAAATGGAAGTTATG AGGCAGAGCGTGTGCAAGGTAGAGATGCTTGGCTATGGCCTCGTTGTCAGAGGTAGCGAACGGCCAAATGACTGG GTGCCGGATATGAGGGACCAGGCCTCTAGGCCGGCGTCGCCCGTGTAG
Transcript	>OphauG2\|7457 ATGGTAGGCCTCAAGCGGGACAGAGAGGGCAATTCGCGCCCTGTAATACCGGACGCGTCAAGCGGGCCGTTTGGC GACATGTTTTGCAGCTTCCGCGACGAGCTGGACCAGCATTATGATCGCAAGGAGCGAATTGTCAAGGCCAGCCGC GATGTGACGGCTCATGCCAAGAAGATTATTTTTGCCTTGCAACGAGTCAAGCAGCTTAATTGCGACTTTCCTGCC TCGACGCAAAAGGATGTTGATGCGCACATGTCTTCGATTGCCAAGCTGCTCGCATCAATTGCTCCCGACCTTGGT CCGCTAAATCGCCATCGCTATGCTTCGCAGCTGCGGTGCTTGGAAGAGCTTGTTGAAGCTCTTTCCTTTGCACAC TATCTGCGCCACCAGTCTATCGTTTCTGCGCCCGAGCTTCAGGCCGCGATGCCTGTAATGCCAGGGGGAACTGAC ACGCCATTGGCGCTGTCTGAGCACGACTATCTCTTTGGTCTTTTTGACTTGTTTGGCGAGCTGATGCGCTTTGCC ACTGTCAGACGAGACAAGGTGCTGCCAGCAAGAAAGGAGGGGGAGCAGACACATCGCCCGCTGCTGCGGGACATG CAGCAGCTTGCATGTGCGTTTGAACTACTACCGCCTCAAGCTGGCAAAGACTTTGGCTCCAAAATGGAAGTTATG AGGCAGAGCGTGTGCAAGGTAGAGATGCTTGGCTATGGCCTCGTTGTCAGAGGTAGCGAACGGCCAAATGACTGG GTGCCGGATATGAGGGACCAGGCCTCTAGGCCGGCGTCGCCCGTGTAG
Gene	>OphauG2\|7457 ATGGTAGGCCTCAAGCGGGACAGAGAGGGCAATTCGCGCCCTGTAATACCGGACGCGTCAAGCGGGCCGTTTGGC GACATGTTTTGCAGCTTCCGCGACGAGCTGGACCAGCATTATGATCGCAAGGAGCGAATTGTCAAGGCCAGCCGC GATGTGACGGCTCATGCCAAGAAGATGTGCCTCTCTCTGTCTTGATTTGCTGCATGTGCTTGGCCTTGGACTGAC CATGATGGTAGTATTTTTGCCTTGCAACGGTAGTAGCTGTCCTGCTGGAAATGTGGGCTGGGGTAGCTTGGACTG AATATGGATTCACTCGATAGAGTCAAGCAGCTTAATTGCGACTTTCCTGCCTCGACGCAAAAGGATGTTGATGCG CACATGTCTTCGATTGCCAAGCTGCTCGCATCAATTGCTCCCGACCTTGGTCCGCTAAATCGCCATCGCTATGCT TCGCAGCTGCGGTGCTTGGAAGAGCTTGTTGAAGCTCTTTCCTTTGCACACTATCTGCGCCACCAGTCTATCGTT TCTGCGCCCGAGCTTCAGGCCGCGATGCCTGTAATGCCAGGGGGAACTGACACGCCATTGGCGCTGTCTGAGCAC GACTATCTCTTTGGTCTTTTTGACTTGTTTGGCGAGCTGATGCGCTTTGCCACTGTCAGACGAGACAAGGTGCTG CCAGCAAGAAAGGAGGGGGAGCAGACACATCGCCCGCTGCTGCGGGACATGCAGCAGCTTGCATGTGCGTTTGAA CTACTACCGCCTCAAGCTGGCAAAGACTTTGGCTCCAAAATGGAAGTTATGAGGCAGAGCGTGTGCAAGGTAGAG ATGCTTGGCTATGGCCTCGTTGTCAGAGGTAGCGAACGGCCAAATGACTGGGTGCCGGATATGAGGGACCAGGCC TCTAGGCCGGCGTCGCCCGTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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